BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922587 Length=250 Score E Sequences producing significant alignments: (Bits) Value AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | c... 298 2e-80 AT5G10680.1 | Symbols: | calmodulin-binding protein-related | ... 152 1e-36 > AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | chr5:3385901-3390686 FORWARD LENGTH=3291 Length=3291 Score = 298 bits (161), Expect = 2e-80 Identities = 194/210 (92%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 30 AATGTTCCGGTTTTGGATGAGACTAGTGATTTGTTCCGCAGGTTTATGCAGAAGAAACGA 89 ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||| Sbjct 759 AATGTTCCGGTTTTGGATGAGACGAGTGATTTGTTCCGCAGGTTTAGGCAGAAAAAACGA 818 Query 90 GATGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACGGTTGCATAT 149 ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 819 GATGCCTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGACACTGTTGCATAT 878 Query 150 TGGAAACAGAAGGCGTTGAATCTGGAGAAAATGCTTGAGGCAAGTACTGAGAGAGAAAGG 209 ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| Sbjct 879 TGGAAACAGAAGGCGTTGAGTCTTGAGAAAATGCTTGAGGCGAGTACTGAGAGAGAAAGG 938 Query 210 AGACTAATCGAGAATAGCTGAGTGAGGGTT 239 || | || ||||| |||||||||| ||| Sbjct 939 CGATTGATGGAGAA--GCTGAGTGAGAGTT 966 > AT5G10680.1 | Symbols: | calmodulin-binding protein-related | chr5:3373584-3374309 FORWARD LENGTH=726 Length=726 Score = 152 bits (82), Expect = 1e-36 Identities = 98/106 (92%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 31 ATGTTCCGGTTTTGGATGAGACTAGTGATTTGTTCCGCAGGTTTATGCAGAAGAAACGAG 90 ||||| |||||||||||||||| ||||||||||||||| |||||| |||||||| ||||| Sbjct 374 ATGTTTCGGTTTTGGATGAGACGAGTGATTTGTTCCGCGGGTTTAGGCAGAAGAGACGAG 433 Query 91 ATGCGTTGTTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGA 136 | | |||| ||||||||||||||||||||||||||||||||||||| Sbjct 434 AAGTGTTGGTCGATAGCAAGAAGATTGAGATCTATGAGGAGTTTGA 479 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11360511274 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5