BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922605 Length=772 Score E Sequences producing significant alignments: (Bits) Value AT1G31150.1 | Symbols: | Domain of unknown function (DUF1985) ... 1240 0.0 AT1G31140.2 | Symbols: GOA | GORDITA | chr1:11117993-11119785 F... 147 2e-34 > AT1G31150.1 | Symbols: | Domain of unknown function (DUF1985) | chr1:11120097-11122587 FORWARD LENGTH=2197 Length=2197 Score = 1240 bits (671), Expect = 0.0 Identities = 744/778 (96%), Gaps = 9/778 (1%) Strand=Plus/Plus Query 1 CGCTTGCTCATTTGAATGACATGAAGGAGTGGATACTGAAACAGAATGAAGACCTTAGAA 60 |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1268 CGCTTGCTTACTTGAATGACATGAAGGAGTGGATACTGAAACAGAATCAAGACCTTAGAA 1327 Query 61 ACAAGATTAGGGAGGATGTTAAAGAAA---TTGTTGGTCCCAAAACACCCGCAGGAGGAG 117 ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| Sbjct 1328 ACAAGATTAGGGAGGATGTTAAAGAAATTGTTGTTGGTCCCAAATCACCAGCAGGAGGAG 1387 Query 118 CATCCAATCTGCGCCGATCAAGCAGGCTTAACACCAATCA-TAAGAGAAAGACTGATGCA 176 |||| |||||||| | ||||| ||||||||||||||| || |||| |||||||||||||| Sbjct 1388 CATCTAATCTGCGTCAATCAAACAGGCTTAACACCAA-CAGTAAGGGAAAGACTGATGCA 1446 Query 177 TCACCCT-CTAAgaaaaccggcaacaaagaaacgcgaaaacgaaaaagaaaacAGGTAGA 235 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1447 TCA-CCTCCTAAGAAAACCGGCAACACAGAAACGCGAAAACGAAAAAGAAAACAGGTAGA 1505 Query 236 GGTTCACTCCTTATCAACTGGAAGCGAGTCAGCCGGTGACATTGAAGGTGAAGCGGATGT 295 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1506 GGTTCACTCCTTATCATCTGGAAGCGAGTCAGCCGGTGACATTGAAGGTGAAGAGGATGT 1565 Query 296 TCAGAGTACATGGAAAGAGGACGGAAATGCGCCAAGCTCGGGTACATTTGAT-AAGTGTG 354 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 1566 TCAGAGTACATGGAAAGAGGACGGAAATGCGCCAAGCTCGGGTACATTTGATGAA-TGTG 1624 Query 355 ATGATTATGGAGATGCTCTAAAAATCACTCAGGAAGGTGATTTGATGCAAGAAGAAAGCG 414 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 1625 ATGATTATGGAGGTGCTCTAAAAATCACTCAGGAAGGTGATGTGATGCAAGAAGAAAGTG 1684 Query 415 ACTTTGATCACTGTTCTTCAAATTGTACAAAGACGAAAGAATCAATGATGAGAGAGATAG 474 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1685 ACTTTGATCACTGTTCTTCAAATTGTACAAAGATGAAAGAATCAATGATGAGAGAGATAG 1744 Query 475 AGAATCTTGAACTGAAACTTCAATTGTATGGAGGACATGGTCTGAATAATTTAACCTACG 534 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1745 AGAACCTTGAACTGAAGCTTCAATTGTATGGAGGACATGGTCTGAATAATTTAACCTACG 1804 Query 535 ACGAGCTTCTTCATTTTGAGCATCAACTCGAATCTTCTCTCCATATTGCTCGAGCTCATA 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1805 ACGAGCTTCTTCATTTTGAGCATCAACTCGAATCTTCTCTCCATATTGCTCGAGCTCATA 1864 Query 595 AGCAGGAGCAGCAGCAACAACAAACAGACAAGCTTAAGGAAAATCTCATGGTGTGTCAAA 654 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1865 AGCAGGAGCAGCAGCAACAACAAACAGACAAGCTTAAGGAGAATCTCATGGTGTGTCAAA 1924 Query 655 GGCAAGAAGATGATGACATCATGCACCGGCAAGTGAAGAAGGAGAACCCACCGGTGTTCT 714 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1925 GGCACGAAGATGATGACATCATGCACCGGCAAGTGAAGAAGGAGAACCCACCGGCGTTCT 1984 Query 715 TCAGCTCCTCTTGCCGCCACAACCAGCCCCAAGACTAGGACAACAACTTCTCTCTATC 772 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1985 TCAGCTCCTCCCGCCGCCACAACCAGCCCCAAGACTAGGACAACAACTTCTCCCTATC 2042 > AT1G31140.2 | Symbols: GOA | GORDITA | chr1:11117993-11119785 FORWARD LENGTH=798 Length=798 Score = 147 bits (79), Expect = 2e-34 Identities = 132/155 (85%), Gaps = 14/155 (9%) Strand=Plus/Plus Query 444 AAGACGAAAGAATCAATGATGAGAGAGATAGAGAATCTTGAA-CTGAAACTTCAATTGTA 502 |||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct 321 AAGACGAAGGAATCAATGATGAGAGAGATAGAGAATCTT-AAGCTGAATCTTCAATTGTA 379 Query 503 TGGA-GGACATGGTCT-GAATAAT-TTAACCTACGACGAGCTTCTT-CATTTTGAGCATC 558 | | |||||||| || |||| | || |||||||||||||| ||| | |||||||| || Sbjct 380 CG-ACGGACATGG-CTTGAATC-TCTTGACCTACGACGAGCTCCTTTC-TTTTGAGC-TC 434 Query 559 AA-CTCGAATCTTCTCTCCAT-ATTGCTCGAGCTC 591 | |||||||||||||| || || |||||||||| Sbjct 435 CATCTCGAATCTTCTCTACAACAT-GCTCGAGCTC 468 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37524907809 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5