BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922723
Length=1698
Score E
Sequences producing significant alignments: (Bits) Value
AT1G35580.1 | Symbols: CINV1 | cytosolic invertase 1 | chr1:131... 2700 0.0
AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:602... 1315 0.0
> AT1G35580.1 | Symbols: CINV1 | cytosolic invertase 1 | chr1:13122204-13125264
REVERSE LENGTH=2066
Length=2066
Score = 2700 bits (1462), Expect = 0.0
Identities = 1615/1690 (96%), Gaps = 6/1690 (0%)
Strand=Plus/Plus
Query 13 AGTG-TGTAATGGAAGGTGGTGGACTAAGAGCTGTGGGATCACACTGTTCTTTATCTGAG 71
|||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 146 AGTGTTATAATGGAAGGTGTTGGACTAAGAGCTGTAGGATCACACTGTTCTTTATCTGAG 205
Query 72 ATGGATGATCTTGATTTGACTCGAGCTTTGGATAAACCAAGATTGAAGATTGAAAGGAAG 131
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 206 ATGGATGATCTTGATTTGACTCGAGCTTTGGATAAACCAAGATTGAAGATCGAAAGGAAG 265
Query 132 AGATCGTTTGATGAGAGGTCGATGAGTGAATTATCGACTGGTTATAGTAGACATGACGGT 191
|||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||
Sbjct 266 AGATCGTTTGATGAAAGATCGATGAGTGAGCTATCGACTGGTTACAGTAGACATGACGGT 325
Query 192 ATTTACGATTCGCCAAGAGGTAGATCGGTGCTTGATACGCCTCTTTCTTCTGCTAGAAAC 251
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 326 ATACACGATTCGCCGCGAGGTAGATCGGTGCTTGATACGCCTCTTTCTTCTGCTAGAAAC 385
Query 252 TCCTTTGAGCCTCATCCTATGATGGCTGAGGCTTGGGAGGCTTTAAGAAGGTCAATGGTT 311
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 386 TCCTTTGAGCCTCATCCTATGATGGCTGAAGCTTGGGAGGCTTTAAGAAGGTCAATGGTC 445
Query 312 TTCTTTCGTGGTCAACCCGTTGGTACTCTTGCCGCGGTTGATAATACTACTGATGAGGTC 371
||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||
Sbjct 446 TTCTTCCGTGGTCAACCTGTTGGTACTCTTGCCGCGGTTGATAATACTACCGATGAAGTC 505
Query 372 TTGAACTATGATCAGGTGTTTGTGAGGGATTTTGTACCGAGTGCGCTGGCGTTTTTGATG 431
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 506 TTGAACTATGATCAGGTGTTTGTGAGGGATTTTGTACCGAGTGCGTTGGCGTTTCTGATG 565
Query 432 AATGGAGAACCGGATATAGTGAAACACTTCTTGCTTAAGACACTTCAGCTTCAAGGTTGG 491
||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct 566 AATGGAGAACCGGATATAGTGAAGCATTTTTTGCTTAAGACACTTCAGCTGCAAGGTTGG 625
Query 492 GAGAAACGTGTGGACCGGTTCAAGTTAGGAGAAGGTGTGATGCCTGCAAGTTTCAAGGTG 551
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 626 GAGAAACGTGTGGATCGGTTTAAGTTAGGAGAAGGTGTGATGCCTGCAAGTTTCAAGGTG 685
Query 552 CTTCATGATCCTATTCGTGAAACGGATAATATTGTTGCGGATTTCGGTGAAAGTGCCATT 611
|||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 686 CTTCATGATCCTATCCGTGAAACGGATAACATTGTTGCGGATTTCGGTGAGAGTGCTATT 745
Query 612 GGACGTGTGGCTCCTGTAGATTCAGGGTTCTGGTGGATTATCCTTCTTCGTGCTTATACC 671
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 746 GGACGTGTGGCTCCTGTAGATTCAGGGTTCTGGTGGATTATTCTTCTTCGTGCTTATACC 805
Query 672 AAATCTACTGGAGATTTGACTCTCTCGGAGACGCCAGAGTGTCAAAAGGGAATGAAACTG 731
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 806 AAATCTACTGGAGATTTGACTCTCTCTGAGACACCAGAGTGTCAAAAGGGAATGAAACTG 865
Query 732 ATCCTT-TCTTTGTGCTTAGCTGAAGGGTTTGACACGTTTCCTACGCTGCTTTGTGCTGA 790
|| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 866 AT-CTTGTCTTTGTGCTTAGCTGAAGGGTTTGACACGTTTCCTACACTGCTTTGTGCTGA 924
Query 791 TGGATGTTCCATGATTGATCGAAGAATGGGTGTTTATGGGTATCCAATTGAGATCCAAGC 850
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 925 TGGATGTTCCATGATTGATCGAAGAATGGGTGTTTATGGGTATCCCATTGAGATCCAAGC 984
Query 851 GTTGTTCTTCATGGCTCTGAGATCTGCCTTGTCGATGTTAAAGCCCGATGGAGATGGCAG 910
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 985 GTTGTTCTTCATGGCTTTGAGATCTGCTTTGTCGATGTTAAAGCCCGATGGAGATGGCAG 1044
Query 911 AGA-GTGCATTGAGAAGATCGTTAAGCGGCTTCACGCCTTGAGCTTCCATATGCGCAATT 969
||| || |||||||| |||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1045 AGAGGT-CATTGAGAGGATCGTTAAGCGACTTCATGCCTTGAGCTTCCATATGCGCAATT 1103
Query 970 ACTTCTGGCTCGATCACCAGAACCTCAATGACATTTACAGGTTCAAGACCGAGGAATATT 1029
|||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 1104 ACTTCTGGCTTGATCATCAGAACCTCAATGACATTTACAGGTTCAAGACTGAGGAATACT 1163
Query 1030 CGCACACGGCAGTGAACAAGTTCAATGTGATGCCTGATTCTATACCGGAGTGGGTTTTCG 1089
| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1164 CTCACACGGCGGTGAACAAGTTCAATGTGATGCCTGATTCTATACCCGAGTGGGTTTTCG 1223
Query 1090 ACTTCATGCCTCTCCGTGGAGGCTACTTTGTGGGAAACGTAGGACCTGCCCATATGGATT 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 ACTTCATGCCTCTCCGTGGAGGCTACTTTGTGGGAAACGTAGGACCTGCCCATATGGATT 1283
Query 1150 TCCGGTGGTTTGCGCTTGGCAATTGTGTCTCCATACTCTCTTCATTGGCCACTCCAGATC 1209
|||||||||| || || || ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1284 TCCGGTGGTTCGCACTCGGTAATTGTGTCTCCATACTTTCTTCATTGGCCACTCCAGATC 1343
Query 1210 AATCCATGGCCATTATGGACCTCCTTGAGCACCGGTGGGCGGAGCTTGTAGGTGAGATGC 1269
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1344 AATCCATGGCCATTATGGACCTCCTTGAGCACCGGTGGGCAGAGCTTGTAGGTGAGATGC 1403
Query 1270 CCCTCAAGATTTGTTATCCATGCCTCGAGGGCCACGAGTGGCGCATCGTCACTGGCTGTG 1329
| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1404 CTCTCAAGATTTGTTATCCATGCCTCGAGGGCCATGAGTGGCGCATCGTTACTGGCTGTG 1463
Query 1330 ACCCCAAGAACACACGGTGGAGCTACCACAACGGTGGATCTTGGCCAGTTTTGCTATGGC 1389
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1464 ACCCCAAGAACACACGGTGGAGCTACCACAATGGTGGATCTTGGCCAGTTTTGCTGTGGC 1523
Query 1390 AGCTAACAGCAGCGTGCGTTAAGACAGGGAGACCGCAGATCGCAAGACGCGCAGTTGACC 1449
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1524 AGCTAACAGCAGCGTGCATTAAGACAGGGAGACCGCAGATCGCAAGACGCGCGGTTGACC 1583
Query 1450 TCATAGAATCGCGTCTTCACAGGGACTGTTGGCCAGAGTATTACGATGGTAAGCTAGGAA 1509
|||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||
Sbjct 1584 TCATAGAATCGCGTCTTCACCGAGACTGTTGGCCAGAGTATTACGACGGTAAGCTCGGAA 1643
Query 1510 GGTACGTTGGAAAACAGGCAAGGAAATACCAGACTTGGTCAATCGCAGGTTACTTAGTGG 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 GGTACGTTGGAAAACAGGCAAGGAAATACCAGACTTGGTCAATCGCAGGTTACTTAGTGG 1703
Query 1570 CAAAAATGTTGCTAGAAGATCCTTCACACATTGGTATGATCTCTCTTGAAGAAGACAAAC 1629
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1704 CGAAAATGTTGCTAGAAGATCCTTCACACATTGGTATGATCTCTCTTGAAGAAGACAAAC 1763
Query 1630 TCATGAAACCAGTCATCAAGCGATCTGCATCTTGGCCACAACTCTGAAAA-CCGCCTTCG 1688
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |
Sbjct 1764 TCATGAAACCAGTCATCAAGCGATCTGCGTCTTGGCCACAACTCTGAAAAACCGCTTTAG 1823
Query 1689 GTTTTTGTTC 1698
||||||||||
Sbjct 1824 GTTTTTGTTC 1833
> AT4G09510.1 | Symbols: CINV2 | cytosolic invertase 2 | chr4:6021164-6023873
REVERSE LENGTH=2032
Length=2032
Score = 1315 bits (712), Expect = 0.0
Identities = 1359/1666 (82%), Gaps = 65/1666 (4%)
Strand=Plus/Plus
Query 36 CTAAGAGCTGTGGGATCACACTGTTCTTTATCTGAGATGGATGATCTTGATTTGACTCGA 95
||||||| || |||||||| ||||||||||| |||||||||||| ||||| | |||||
Sbjct 238 CTAAGAGTTGAAGGATCACATTGTTCTTTATCAGAGATGGATGATTTTGATCTAACTCGG 297
Query 96 GCTTTGGATAAACC-AAG-A-TTGAAGATTGAAAGGAAGAGATCGTTTGATGAGAGGTCG 152
||||| || || || | | | | ||||| ||| |||||||||||||||| || ||||||
Sbjct 298 GCTTTAGAGAAGCCGAGGCAGCTAAAGATCGAACGGAAGAGATCGTTTGACGAAAGGTCG 357
Query 153 ATGAGTGAATTATCGACTGGTTATAGT-AGACATGACGGTA-TTT----A---C-GATTC 202
||||| || ||||||||||| ||| || ||||| || | | ||| | | ||||
Sbjct 358 ATGAGCGAGTTATCGACTGGCTAT-GTAAGACAAGATAGCATTTTAGAAATGGCTCATTC 416
Query 203 GCCAAGAGGTAGATCGGTGCTTGATACGCCTCTTTCTTCTGCTAGAAACTCCTTT-GAGC 261
|| || |||| || || | || || |||| || |||| ||| |||| |||| ||||
Sbjct 417 TCCTGGAAGTAGGTCAATGGTGGACACTCCTC--TC-TCTGTTAGGAACT-CTTTCGAGC 472
Query 262 CTCATCCTATGATGGCTGAGGCTTGGGAGGCTTTAAGAAGGTCAATGGTTTTCTTTCGTG 321
||||||| ||| | |||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct 473 CTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTTTCGTG 532
Query 322 GTCAACCCGTTGGTACTC-TTGCCGCGGT-TGATAAT-ACTACTGATGAGGTCTTGAACT 378
|||||||||||||||| | |||| || | ||| || || | || |||||||||||||
Sbjct 533 GTCAACCCGTTGGTAC-CATTGCAGC-TTATGACCATGCCT-CCGAGGAGGTCTTGAACT 589
Query 379 ATGATCAGGTGTTTGTGA-GGGATTTTGTACCGAGTGCGCTGGCGTTTTTGATGAATGGA 437
|||||||||||||||| | | || |||||||| ||||| |||||||| |||||||||||
Sbjct 590 ATGATCAGGTGTTTGT-ACGTGACTTTGTACCAAGTGCATTGGCGTTTCTGATGAATGGA 648
Query 438 GAACCGGATATAGTGAAACACTTCTTGCTTAAGACACTTCAGCTTCAAGGTTGGGAGAAA 497
|| || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 649 GAGCCCGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAAA 708
Query 498 CGTGTGGACCGGTTCAAG-TTAGGAGAAGGTGTGATGCCTGCAAGTTTCAAGGTGCTTCA 556
|| || |||||||||||| || || ||||| || ||||| || |||||||||||||||||
Sbjct 709 CGGGTTGACCGGTTCAAGCTTGGG-GAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCA 767
Query 557 TGATCCTA-TTCGTGAAACGGATA-ATATTGTTGCGGATTTCGGTGAAAGTGCCATTGGA 614
|||||| | ||||| |||| || | | ||| |||||||||| || ||||| || || |||
Sbjct 768 TGATCC-AGTTCGTAAAACCGACACA-ATTATTGCGGATTTTGGAGAAAGCGCTATAGGA 825
Query 615 CGTGTGGCTCCTGTAGATTCAGGGTTCTGGTGGATTATCCTTCTTCGTGCTTATACCAAA 674
| || || || || |||||||| ||||||||||| || ||||| |||||||| || |||
Sbjct 826 AGAGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAA 885
Query 675 TCTACTGGAGATTTGACTCTCTCGGAGACGCCAGAGTGTCAAAAGGGAATGAAACTGATC 734
||||| |||||||||||| | || ||||| ||||||||||| | |||||||| || ||
Sbjct 886 TCTACGGGAGATTTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATA 945
Query 735 CTTTCT-TTGTGCTTAGCTGAAGGGTTTGACACGTTTCC-TACGCTGCTTTGTGCTGATG 792
|| ||| || |||||| | ||||| ||||| || ||||| |||||| ||||||||||| |
Sbjct 946 CTCTCTCTT-TGCTTATCCGAAGGTTTTGATAC-TTTCCCTACGCTTCTTTGTGCTGACG 1003
Query 793 GATGTTCCATGATTGATCGAAGAATGGGTGTTTATGGGTATCCAATTGAGATCCAAGCGT 852
| ||||| ||| ||||| | ||||||||||||||||| |||||||| ||||| ||||| |
Sbjct 1004 GTTGTTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGC-T 1062
Query 853 -TGTTCTTCATGGC-TCTGAGAT-CTGCCTTGTCGATG-TTAAAGCCCGATGGAG-ATGG 907
|||| |||||||| | |||||| | |||||||||||| ||||| || || | || | ||
Sbjct 1063 CTGTTTTTCATGGCAT-TGAGATGC-GCCTTGTCGATGCTTAAA-CCAGACG-AGGAAGG 1118
Query 908 -CAGAGAGTGCATTGAGAAG-ATCGTTAAGCGGCTTCACGC-CTTGAGCTTCCATATGCG 964
| |||| | ||| || ||| || || ||| | |||||||| || ||| |||||||||||
Sbjct 1119 TC-GAGATTTCATAGA-AAGGATTGTGAAGAGACTTCACGCGCT-GAGTTTCCATATGCG 1175
Query 965 CAATTACTTCTGGCTCGA-TCACCAGAACCTCAATGACATTTACAGGTTCAAGACCGAGG 1023
|| |||||| ||||| || | | | ||| |||| || || || |||| |||||| ||||
Sbjct 1176 CAGTTACTTTTGGCTTGACTTTCAACAAC-TCAACGATATCTATAGGTACAAGACAGAGG 1234
Query 1024 AATATTCGCACACGGCAGTGAACAAGTTCAATGTGATGCCTGATTCTATACCGGAGTGGG 1083
| || || ||||| || |||||||||||||| |||||||| || || ||||| || ||||
Sbjct 1235 AGTACTCACACACCGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGG 1294
Query 1084 TTTTCGACTTCATGCCTCTCCGTGGAGGCTACTTTGTGGGAAACGTAGGACCTGCCCATA 1143
|||||||||| ||||||||||||||||| || ||||| || || ||| | || |||| ||
Sbjct 1295 TTTTCGACTTTATGCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTA 1354
Query 1144 TGGATTTCCGGTGGTTTGCGCTT-GGCAATTGTGTCTCCATACTCTCTTCATTGGCCACT 1202
|||||||| |||||||| | ||| || |||||||||||||| || ||||| ||||| |||
Sbjct 1355 TGGATTTCAGGTGGTTTTC-CTTAGGAAATTGTGTCTCCATCCTTTCTTCCTTGGCAACT 1413
Query 1203 CCAGATCAATCCATGGCCATTATGGACCTCCTTGAGCACCGGTGGGCGGAGCTTGTAGGT 1262
|| ||||| || ||||| |||||||||||||| |||||||| |||| |||||| |||||
Sbjct 1414 CCGGATCAGTCAATGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGC 1473
Query 1263 GAGATGCCCCTCAAGATTTGTTATCCATGCCTCGAGGGCCACGAGTGGCGCATCGTCACT 1322
|||||||| |||||||| ||||| || ||| |||| ||||||||||||| || || ||
Sbjct 1474 GAGATGCCGCTCAAGATATGTTACCCTTGCATCGAAAGCCACGAGTGGCGGATTGTTACC 1533
Query 1323 GGCTGTGACCCCAAGAACAC-ACGGTGGAGCTACCACAACGGTGGATCTTGGCCAGTTTT 1381
|| ||||| || || ||||| | ||||||| |||||||||||||||||||||||||| ||
Sbjct 1534 GGTTGTGATCCTAAAAACACGA-GGTGGAGTTACCACAACGGTGGATCTTGGCCAGTATT 1592
Query 1382 GCTATGG-CAGCTAACAGCAGCGTGCGTTAAGACAGGGA-GACCGCAGATCGCAAGACGC 1439
||| ||| | ||| || || || ||| | ||||| || | | || || || || |||||
Sbjct 1593 GCTGTGGAC-GCTGACGGCGGCATGCATCAAGACTGG-ACGGCCTCAAATAGCGAGACGT 1650
Query 1440 GC-AGTTGACCTCATAGAATCGCGTCTTCACAGGGACTGTTGGCCAGAGTATTACGATGG 1498
|| | |||| || || ||||| || || ||| | || || ||||| || || || |||||
Sbjct 1651 GCGA-TTGATCTAATTGAATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGG 1709
Query 1499 TAAGCTAGGAAGGTACGTTGGAAAACAGGCAAGGAAATACCAGACTTGGTCAATCGCAGG 1558
||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1710 TAAGCAAGGAAGGTACGTTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGG 1769
Query 1559 TTACTTAGTGGCAAAAATGTTGCTAGAAGATCCTTCACACATTGGTATGATCTCTCTTGA 1618
|||||| || || |||||| |||| |||||||||||||| ||||| ||||||||||||||
Sbjct 1770 TTACTTGGTTGCGAAAATGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGA 1829
Query 1619 AGAAGACAAACTCATGAAACCAGTCATCAAGCGATCTGCATCTTGG 1664
||||||||||| |||||||| || |||||| ||||||| || |||
Sbjct 1830 AGAAGACAAACAGATGAAACCTGTTATCAAGAGATCTGCTTCATGG 1875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83935311240
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5