BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922740
Length=3071
Score E
Sequences producing significant alignments: (Bits) Value
AT1G35710.1 | Symbols: | Protein kinase family protein with le... 3271 0.0
> AT1G35710.1 | Symbols: | Protein kinase family protein with
leucine-rich repeat domain | chr1:13220940-13224681 FORWARD
LENGTH=3658
Length=3658
Score = 3271 bits (1771), Expect = 0.0
Identities = 2322/2583 (90%), Gaps = 58/2583 (2%)
Strand=Plus/Plus
Query 514 AACAAACTTGCCAGTTCAATTCCTTCATCCATAGGGAAACTCAAGAACTTGACGGTTCTT 573
||||||||| | ||||||||||||| ||| |||| || ||||||||||||||| |||||
Sbjct 838 AACAAACTTACTGGTTCAATTCCTTCTTCCTTAGGTAATCTCAAGAACTTGACGCTTCTT 897
Query 574 TATCTTTAT-AAGAACTATCTAACTGGTGTCATTCCCCCGGATCTAGGCAACATGGAATA 632
| ||||| | |||||||||||||||||| |||||||||| | ||||||||||| ||||
Sbjct 898 TCTCTTT-TCCAGAACTATCTAACTGGTGGCATTCCCCCGAAACTAGGCAACATAGAATC 956
Query 633 CATGATTGATTTAGAGTTAAGTCATAACAAACTTACCGGTTCAATTCCTTCTTCCTTAGG 692
|||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct 957 CATGATCGATTTAGAGTTGAGTAACAACAAACTTACCGGTTCAATTCCTTCTTCCTTAGG 1016
Query 693 AAATCTCAAGAACTTGACGGTTCTTTATCTTCATC-ACAATTATCTT-ACTGGTGTCATT 750
|||||||||||| ||||| ||||||||||| | | | || ||| || ||||||||||||
Sbjct 1017 AAATCTCAAGAATTTGACTATTCTTTATCTTTA-CGAGAACTAT-TTAACTGGTGTCATT 1074
Query 751 CCCCCGGAACTAGGCAACATGGAATCCATGA-TCAGTTT--AGCTTTAAGTGAGAACAAA 807
|||||||||||||||||||||||||| |||| | | ||| || || || | | ||||||
Sbjct 1075 CCCCCGGAACTAGGCAACATGGAATCGATGATTGA-TTTACAG-TTGAA-TAACAACAAA 1131
Query 808 CTTACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGACTGT-TCTTTATCT 866
|||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||
Sbjct 1132 CTTACCGGTTCAATTCCTTCTTCCTTCGGAAATCTCAAGAACTTGAC-GTATCTTTATCT 1190
Query 867 TCATCAGAATTATATAACTGGTGTCATTCCCCCA-GAACTAGGCAACATGGAATCCATGA 925
| | | ||||||| |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct 1191 TTACCTGAATTATTTAACTGGTGTCATT-CCCCAGGAGCTAGGCAACATGGAATCCATGA 1249
Query 926 TTGATTTAGAGTTAAGTGAGAACAATCTTACAGGTTCAATTCCTTCTTCCTTTGGTAACT 985
| ||||||| |||||| ||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 1250 TCAATTTAGATTTAAGTCAGAACAAACTTACAGGTTCTGTTCCTGATTCCTTTGGTAACT 1309
Query 986 TTACCAAGCTGAAAAGTTTGTATC-TCTGT-TATAACCACCTCTCTGGTGCGATCCCGCC 1043
||||||||||| |||||||||| | || || | |||||||||||||||||||||||||||
Sbjct 1310 TTACCAAGCTGGAAAGTTTGTACCTTC-GTGT-TAACCACCTCTCTGGTGCGATCCCGCC 1367
Query 1044 GGGAGTAGCAAACTCTTCAGAGCTAACTAAATTGCA-ACTCGCCATAAACAACTTCACCG 1102
|||||||||||||||||| | ||||||| ||| | ||| | || ||||||||||| |
Sbjct 1368 AGGAGTAGCAAACTCTTCACATCTAACTACCTTG-ATACTTGACACCAACAACTTCACTG 1426
Query 1103 GTTTCTTGCCTAAGAAC-ATTTGCAAAGGT-GGCAAGCTTCAGATTATCACTTTAGATGA 1160
||||||| ||| | ||| ||||||||||| || |||||||| | |||| | || ||| |
Sbjct 1427 GTTTCTTTCCTGA-AACTGTTTGCAAAGGTAGG-AAGCTTCAAAATATCTCATTGGATTA 1484
Query 1161 TAATCACCTCAAAGGTCCTATCCCGAAAAGCTTGAGAGATTGCAAGAGCCTGATCAGAGC 1220
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1485 CAATCACCTCGAAGGTCCTATCCCGAAAAGCTTGAGAGATTGCAAGAGCCTGATCAGAGC 1544
Query 1221 AAAATTTGTAGGGAACAAATTCGTTGGAAATATTTCTGAAGCTTTTGGGGTTTACCCAGA 1280
|| |||| |||| ||||||||| ||| |||||| ||||||||||||| ||||||||||
Sbjct 1545 AAGATTTCTAGGAAACAAATTCACTGGCGATATTTTTGAAGCTTTTGGGATTTACCCAGA 1604
Query 1281 TCTTAATTTCATTGATCTCAGCCGCAATAAATTCAACGGTGAAATTTCAAGCAACTGGCA 1340
||||| ||||||||| |||||| ||| |||||| ||||||| ||||| ||||||||| |
Sbjct 1605 CCTTAACTTCATTGATTTCAGCCACAACAAATTCCACGGTGAGATTTCTAGCAACTGGGA 1664
Query 1341 GAAGAGCCCAAAGCTAGGTGCCTTGATCATGTCAAACAACAACATCACGGGTGCTATCCC 1400
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 GAAGAGTCCAAAGCTAGGTGCCTTGATCATGTCAAACAACAACATCACGGGTGCTATCCC 1724
Query 1401 ACCTGAGATTTGGATCATGAAACAACTGGGCGAGCTGGATCTATCTACCAACAACCTCTC 1460
| | |||||||||| ||||| |||||| | ||||||||||||||||||||||||||||
Sbjct 1725 AACAGAGATTTGGAACATGACACAACTAGTTGAGCTGGATCTATCTACCAACAACCTCTT 1784
Query 1461 TGGTGAACTTCCAGAAGCAATTGGAAATCTCACGAATTTGTCGAGGCT-CAGACTTAATG 1519
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1785 TGGTGAACTTCCAGAAGCAATTGGAAATCTCACGAATTTGTCGAGGCTAC-GACTTAATG 1843
Query 1520 GGAATCAGTTATCTGGAAGAGTTCCTGCAGGAATAAGTTTCTTAACCAATCTTGAGTCTC 1579
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1844 GGAATCAGTTATCTGGAAGAGTTCCTGCAGGTTTAAGTTTCTTAACCAATCTTGAGTCTC 1903
Query 1580 TTGACTTATCCTCAAACAGATT-CAGCTCCCAGATCCCACAAACCTTCGATTCCTTTTTA 1638
|||||||||||||||||| ||| |||||| |||||||||||||||| || |||||||||
Sbjct 1904 TTGACTTATCCTCAAACA-ATTTCAGCTCAGAGATCCCACAAACCTTTGACTCCTTTTTA 1962
Query 1639 AAGCTTCATGAAATGAACCTGAGCAGAAACAATTTCAATGGACGCATTCCCGGACTAACA 1698
||||||||||| |||||||||||||||||||| ||| | ||| |||||||| ||||| ||
Sbjct 1963 AAGCTTCATGACATGAACCTGAGCAGAAACAAATTCGACGGAAGCATTCCCCGACTATCA 2022
Query 1699 AAGCTGACTCAGTTAACGCATCTTGATCTCAGCCACAACCAGCTCGACGGAGAAATCCCA 1758
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2023 AAGCTGACTCAGTTAACGCAACTTGATCTCAGCCACAACCAGCTCGACGGAGAAATCCCA 2082
Query 1759 TCACAGCTCAGCTCCTTGCAGAGCCTCGACAAGCTCAACCTCTCACACAACAATCTCTCA 1818
||||| || |||||| |||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 2083 TCACAACTAAGCTCCCTGCAAAGCCTCGACAAGCTCGACCTCTCACACAACAATCTCTCA 2142
Query 1819 GGTTTCATTCCAACAACTTTCGAGAGCATGAAAGCGCTGACGTTCATCGATATATCAAAT 1878
||| |||||||||||||||||||| |||||| |||||||||| | |||||||||||||
Sbjct 2143 GGTCTCATTCCAACAACTTTCGAGGGCATGATAGCGCTGACGAACGTCGATATATCAAAC 2202
Query 1879 AATAAACTCGAGGGTCCGCTTCCAGACAATCCAGCGTTTC-AAAACGCAACATCAGATGC 1937
||||||||||| |||||||||||||| | |||| |||||| |||| |||||| |||||||
Sbjct 2203 AATAAACTCGAAGGTCCGCTTCCAGATACTCCAACGTTTCGAAAA-GCAACAGCAGATGC 2261
Query 1938 ATTGGAGGGAAACAGAGGCTTATGCAGTAATATTCCTAAACAAAGGTTGAAATCATGCCC 1997
|||||||| ||||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 2262 ATTGGAGGAAAACATAGGCTTATGCAGTAATATTCCTAAACAAAGATTGAAACCATGCCG 2321
Query 1998 TATCACTTCTGGTGGGTTCCAAAAGCCGAAGAAGAACGGCAACCTTCTTGTGTGGATACT 2057
| | || | | ||| |||||||| || ||||||||| ||||||||||| |
Sbjct 2322 TG--AGTT--GAAG------AAA--CCGAAGAAAAATGGCAACCTTGTTGTGTGGATATT 2369
Query 2058 AGTGCCAATCCTAGGAGCACTCGTCATTCTCTCTATATGTGCAGGCGCATTTACCTACTA 2117
||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||
Sbjct 2370 AGTGCCAATCCTAGGAGTACTCGTCATTCTCTCTATATGTGCAAACACATTCACCTACTG 2429
Query 2118 CATTCGGAAACGAAAACCACACAATGGAAGAAACACAGATTCTGAAACTGGAGAGAATAT 2177
||||||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||
Sbjct 2430 CATTCGGAAACGAAAACTACAAAATGGAAGAAACACAGATCCTGAAACAGGAGAGAATAT 2489
Query 2178 GTCCATATTCAGCGTTGATGGCAAATTCAAATACCAAGATATCATCGAATCAACAAACGA 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2490 GTCCATATTCAGCGTTGATGGCAAATTCAAATACCAAGATATCATCGAATCAACAAACGA 2549
Query 2238 ATTCGATCAAAGATACCTCATCGGAAGCGGAGGATACAGCAAAGTCTACAAAGCAAACCT 2297
|||||||| || | |||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2550 ATTCGATCCAACACACCTCATCGGAACCGGAGGATACAGCAAAGTCTACAGAGCAAACCT 2609
Query 2298 CCCAGATGCGATCGTAGCCGTGAAAAGGCTACATGATACAATAGACGAAGAGATATCAAA 2357
|| |||| | ||| ||||||| ||| | |||||||| |||||||||||||||||||||||
Sbjct 2610 CCAAGATACAATCATAGCCGTTAAACGACTACATGACACAATAGACGAAGAGATATCAAA 2669
Query 2358 GCCAGTGGTGAAGCAAGAGTTCCTAAACGAAGTAAGAGCGTTAACAGAGATCCGTCACCG 2417
|||||| ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||
Sbjct 2670 GCCAGTTGTGAAGCAAGAGTTCCTAAACGAGGTAAAAGCATTAACAGAGATCCGTCACCG 2729
Query 2418 CAACGTGGTGAAGCTCTTCGGCTTCTGCTCCCACCGCCGCCACACGTTTCTGATCTACGA 2477
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2730 CAACGTTGTGAAGCTCTTCGGCTTCTGCTCCCACCGCCGCCACACATTTCTGATCTACGA 2789
Query 2478 GTACATGGAAAAAGGAAGTTTAAACAAACTCTTAGCCAACGAAGAAGAAGCTAAGCGACT 2537
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2790 GTACATGGAAAAAGGAAGTTTAAACAAACTCTTAGCCAACGACGAAGAAGCTAAGCGACT 2849
Query 2538 CACTTGGACCAAGAGGATCAACATCGTGAAAGGTGTGGCTCACGCGTTATCGTATATGCA 2597
|||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 2850 CACTTGGACCAAAAGGATCAACGTCGTGAAAGGTGTGGCTCACGCTTTATCGTATATGCA 2909
Query 2598 CCATGACCGA-TCAACTCCGATCGTCCACCGTGATATTAGCAGCGGCAACATCCTTCTCG 2656
|||||||||| | ||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct 2910 CCATGACCGAAT-AACACCGATCGTTCACCGTGATATTAGCAGCGGAAACATCCTTCTCG 2968
Query 2657 ATAATGATTACACAGCTAAGATCTCTGATTTTGGCACAGCGAAGCTTCTCAAGACGGATT 2716
|||| |||||||||||||||||||| |||||||| ||||| || ||||| ||||||||||
Sbjct 2969 ATAACGATTACACAGCTAAGATCTCCGATTTTGGTACAGCAAAACTTCTAAAGACGGATT 3028
Query 2717 CATCAAACTGGTCCGCCGTTGCTGGAACCTACGGCTACGTCGCTCCAGAGTTTGCTTACA 2776
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 3029 CATCAAACTGGTCCGCCGTTGCTGGAACCTACGGCTACGTTGCACCAGAGTTTGCTTACA 3088
Query 2777 CGATGAAGGTGACGGAGAAATGCGATGTGTATAGCTTCGGGGTTTTGATACTCGAGGTT- 2835
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3089 CGATGAAGGTGACGGAGAAATGCGATGTGTATAGCTTCGGGGTTTTGATACTCGAA-TTG 3147
Query 2836 ATAATGGGGAAGCATCCGGGAGATTTGGT-TGCGAGTTTGTCTTCGTCTCCGGGAGAAAC 2894
||||| ||||| ||||||||||||||||| | ||||||||||||||||||| |||||| |
Sbjct 3148 ATAATTGGGAAACATCCGGGAGATTTGGTAT-CGAGTTTGTCTTCGTCTCCAGGAGAAGC 3206
Query 2895 TCTGTCCCTGAGAAGCATTTCCGATGAACGTATATTAGAACCACGGGGGCAGAATAGAGA 2954
|||||| || ||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct 3207 TCTGTCGCTAAGAAGCATTTCCGATGAACGTGTATTAGAACCACGGGGACAAAATAGAGA 3266
Query 2955 GAAGCTCATAAAGATGGTGGAAGTGGCTTTATCGTGTTTACAAGCAGATCC-GCAATCTC 3013
||||||| | |||||||||||| ||||||||| ||||||||||||| |||| | ||||||
Sbjct 3267 GAAGCTCTTGAAGATGGTGGAAATGGCTTTATTGTGTTTACAAGCAAATCCAG-AATCTC 3325
Query 3014 GGCCAACGATGTTATCAATCTCTAC-AGCTTTTTCTTAGAA-CTCATCTTC---ATCAAT 3068
||||||||||||| |||||||| || | | ||||||||||| || | |||| ||||||
Sbjct 3326 GGCCAACGATGTTGTCAATCTCCACTA-CATTTTCTTAGAAACTGAACTTCTCCATCAAT 3384
Query 3069 TTC 3071
|||
Sbjct 3385 TTC 3387
Score = 573 bits (310), Expect = 3e-162
Identities = 399/439 (91%), Gaps = 17/439 (4%)
Strand=Plus/Plus
Query 28 ATGGGTTTTGCAGAGAAGAATTC-TTATGATCTTCTTTTTCTTTTGTTCATATCAATAAT 86
|||||||||||||||||||| || ||||||| ||| ||||||||||||||| || || ||
Sbjct 1 ATGGGTTTTGCAGAGAAGAA-TCTTTATGATTTTCGTTTTCTTTTGTTCATTTCCATTAT 59
Query 87 TTTGAGCTGTTCTATTTCAGCTTCTGCAACTATCGCGGAAGCAAATGCTCTTCTGAAATG 146
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 60 TTTGAGCTGTTCCATTTCAGCTTCTGCAACTATCGCAGAAGCAAATGCTCTTCTGAAATG 119
Query 147 GAAATCCACTTTCACGAACCAGAAACGCTCATCAAATCTGTCTTCATGGGTCAATGATGC 206
|||||||||||| | | | | || ||||||||| ||||||||||||||| |||||||
Sbjct 120 GAAATCCACTTT--C--A-C-G-AA--CTCATCAAAACTGTCTTCATGGGTCCATGATGC 170
Query 207 AAACACCAATACTAGCTTTTCATGCACCAGTTGGTATGGTGTTTCCTGCAACTCACGAGG 266
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 171 AAACACCAATACTAGCTTTTCCTGCACCAGTTGGTATGGTGTTTCTTGCAACTCACGAGG 230
Query 267 GAGTATCGAAAAGTTAAACCTCACTGGCAAC-GCTATAGAAGGTACTTTCCAAGATTTCC 325
|||||||||| |||||||||||||| | || | ||||||||||||||||||||||||||
Sbjct 231 GAGTATCGAAGAGTTAAACCTCACTAAC-ACTGGTATAGAAGGTACTTTCCAAGATTTCC 289
Query 326 CCTTC-TCTTCTCTCCCAAACCTTGCTTACATTGATTTTAGCATGAACCGTTTCTCTGGA 384
||||| | ||||||| |||||||||||||| | ||| |||||||||||| ||| ||||||
Sbjct 290 CCTTCAT-TTCTCTCTCAAACCTTGCTTACGTAGATCTTAGCATGAACCTTTTATCTGGA 348
Query 385 ACCATCCCTCCTCAATTCGGAAACCTCTTTAAACTCATCTACTTTGACCTCTCCACAAAC 444
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 349 ACCATCCCTCCTCAATTCGGAAACCTCTCTAAACTCATCTACTTTGACCTCTCCACAAAT 408
Query 445 CACTTAACTCG-AGAAATC 462
|||||||| || |||||||
Sbjct 409 CACTTAAC-CGGAGAAATC 426
Score = 564 bits (305), Expect = 2e-159
Identities = 403/449 (90%), Gaps = 12/449 (3%)
Strand=Plus/Plus
Query 541 TCCATAGGGAAA-CTCAAGAACTTGACGGTTCTTTATCTTTA-TAAGAACTATCTAACTG 598
||| || ||||| ||||||||||||||||| ||||||||| | || ||||||||||||
Sbjct 433 TCCTTA-GGAAATCTCAAGAACTTGACGGTACTTTATCTTCACCAA-AACTATCTAACTA 490
Query 599 GTGTCATTCCCCCGGATCTAGGCAACATGGAATACATGATTGATTTAGAGTTAAGTCATA 658
||||||||||| |||| |||||||||||||||| ||||| ||||||| | ||||||| |
Sbjct 491 GTGTCATTCCCTCGGAACTAGGCAACATGGAATCCATGACAGATTTAGCGCTAAGTCAGA 550
Query 659 ACAAACTTACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGACGGTTCTTT 718
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 551 ACAAACTTACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGATGGTTCTTT 610
Query 719 ATCTTCATC-ACAATTATCTTACTGGTGTCATTCCCCCGGAACTAGGCAACATGGAATCC 777
||||| | | | || ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 611 ATCTTTA-CGAGAACTATCTAACTGGTGTCATTCCCCCGGAACTAGGTAACATGGAATCC 669
Query 778 ATGATCAG-TTTAGCTTTAAGTGAGAACAAACTTACCGGTTCAATTCCTTCTTCCTTAGG 836
|||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 670 ATGA-CAGATTTAGCTTTAAGTCAGAACAAACTTACCGGTTCAATTCCTTCTACCTTAGG 728
Query 837 AAATCTCAAGAACTTGACTG-TTCTTTATCTTCATC-AGAATTATATAACTGGTGTCATT 894
||||||||||||||||| || ||||||||||| | | |||| ||| ||||||||||||||
Sbjct 729 AAATCTCAAGAACTTGA-TGGTTCTTTATCTTTA-CGAGAACTATCTAACTGGTGTCATT 786
Query 895 CCCCCAGAACTAGGCAACATGGAATCCATGATTGATTTAGAGTTAAGTGAGAACAATCTT 954
||||||||| ||||||||||||||||||||| |||||| | ||||| ||||||| |||
Sbjct 787 CCCCCAGAAATAGGCAACATGGAATCCATGACAAATTTAGCGCTAAGTCAGAACAAACTT 846
Query 955 ACAGGTTCAATTCCTTCTTCCTTTGGTAA 983
|| |||||||||||||||||||| |||||
Sbjct 847 ACTGGTTCAATTCCTTCTTCCTTAGGTAA 875
Score = 564 bits (305), Expect = 2e-159
Identities = 417/470 (89%), Gaps = 12/470 (3%)
Strand=Plus/Plus
Query 514 AACAAACTTGCCAGTTCAATTCCTTCATCCATAGGGAAA-CTCAAGAACTTGACGGTTCT 572
||||||||| || ||||||||||||| ||| || ||||| ||||||||||||| ||||||
Sbjct 550 AACAAACTTACCGGTTCAATTCCTTCTTCCTTA-GGAAATCTCAAGAACTTGATGGTTCT 608
Query 573 TTATCTTTATAAGAACTATCTAACTGGTGTCATTCCCCCGGATCTAGGCAACATGGAATA 632
||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 609 TTATCTTTACGAGAACTATCTAACTGGTGTCATTCCCCCGGAACTAGGTAACATGGAATC 668
Query 633 CATGATTGATTTAGAGTTAAGTCATAACAAACTTACCGGTTCAATTCCTTCTTCCTTAGG 692
||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 669 CATGACAGATTTAGCTTTAAGTCAGAACAAACTTACCGGTTCAATTCCTTCTACCTTAGG 728
Query 693 AAATCTCAAGAACTTGACGGTTCTTTATCTTCATC-ACAATTATCTTACTGGTGTCATTC 751
||||||||||||||||| ||||||||||||| | | | || ||||| |||||||||||||
Sbjct 729 AAATCTCAAGAACTTGATGGTTCTTTATCTTTA-CGAGAACTATCTAACTGGTGTCATTC 787
Query 752 CCCCGGAACTAGGCAACATGGAATCCATGATCAG-TTTAGCTTTAAGTGAGAACAAACTT 810
|||| ||| ||||||||||||||||||||| || |||||| ||||| |||||||||||
Sbjct 788 CCCCAGAAATAGGCAACATGGAATCCATGA-CAAATTTAGCGCTAAGTCAGAACAAACTT 846
Query 811 ACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGACTG-TTCTTTATCTTCA 869
|| ||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||
Sbjct 847 ACTGGTTCAATTCCTTCTTCCTTAGGTAATCTCAAGAACTTGAC-GCTTCTTTCTCTTT- 904
Query 870 TC-AGAATTATATAACTGGTGTCATTCCCCCAGAA-CTAGGCAACATGGAATCCATGATT 927
|| |||| ||| ||||||||| ||||||||| ||| ||||||||||| |||||||||||
Sbjct 905 TCCAGAACTATCTAACTGGTGGCATTCCCCC-GAAACTAGGCAACATAGAATCCATGATC 963
Query 928 GATTTAGAGTTAAGTGAGAACAATCTTACAGGTTCAATTCCTTCTTCCTT 977
||||||||||| ||| | ||||| ||||| ||||||||||||||||||||
Sbjct 964 GATTTAGAGTTGAGTAACAACAAACTTACCGGTTCAATTCCTTCTTCCTT 1013
Score = 547 bits (296), Expect = 2e-154
Identities = 414/470 (88%), Gaps = 12/470 (3%)
Strand=Plus/Plus
Query 514 AACAAACTTGCCAGTTCAATTCCTTCAT-CCATAGGGAAA-CTCAAGAACTTGACGGTTC 571
||||||||| || ||||||||||||| | || || ||||| ||||||||||||| |||||
Sbjct 694 AACAAACTTACCGGTTCAATTCCTTC-TACCTTA-GGAAATCTCAAGAACTTGATGGTTC 751
Query 572 TTTATCTTTATAAGAACTATCTAACTGGTGTCATTCCCCCGGATCTAGGCAACATGGAAT 631
|||||||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 752 TTTATCTTTACGAGAACTATCTAACTGGTGTCATTCCCCCAGAAATAGGCAACATGGAAT 811
Query 632 ACATGATTGATTTAGAGTTAAGTCATAACAAACTTACCGGTTCAATTCCTTCTTCCTTAG 691
||||| |||||| | ||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 812 CCATGACAAATTTAGCGCTAAGTCAGAACAAACTTACTGGTTCAATTCCTTCTTCCTTAG 871
Query 692 GAAATCTCAAGAACTTGACGGTTCTTTATCTTCAT-CACAATTATCTTACTGGTGTCATT 750
| |||||||||||||||||| |||||| |||| | || || ||||| ||||||| ||||
Sbjct 872 GTAATCTCAAGAACTTGACGCTTCTTTCTCTT-TTCCAGAACTATCTAACTGGTGGCATT 930
Query 751 CCCCCGGAACTAGGCAACATGGAATCCATGATCAG-TTTAGCTTTAAGTGAGAACAAACT 809
|||||| ||||||||||||| |||||||||||| | ||||| || ||| | ||||||||
Sbjct 931 CCCCCGAAACTAGGCAACATAGAATCCATGATC-GATTTAGAGTTGAGTAACAACAAACT 989
Query 810 TACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGACTGTTCTTTATCTTCA 869
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
Sbjct 990 TACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAATTTGACTATTCTTTATCTTTA 1049
Query 870 TC-AGAATTATATAACTGGTGTCATTCCCCCAGAACTAGGCAACATGGAATCCATGATTG 928
| |||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1050 -CGAGAACTATTTAACTGGTGTCATTCCCCCGGAACTAGGCAACATGGAATCGATGATTG 1108
Query 929 ATTTAGAGTT-AAGTGAGAACAATCTTACAGGTTCAATTCCTTCTTCCTT 977
||||| |||| || | | ||||| ||||| ||||||||||||||||||||
Sbjct 1109 ATTTACAGTTGAA-TAACAACAAACTTACCGGTTCAATTCCTTCTTCCTT 1157
Score = 385 bits (208), Expect = 2e-105
Identities = 269/298 (90%), Gaps = 6/298 (2%)
Strand=Plus/Plus
Query 683 CTTCCTTAGGAAATCTCAAGAACTTGACGGTTCTTTATCTTCATCACAATTATCTTACTG 742
||||||||||||||||||||||||||||||| ||||||||||| || || ||||| |||
Sbjct 431 CTTCCTTAGGAAATCTCAAGAACTTGACGGTACTTTATCTTCACCAAAACTATCTAACTA 490
Query 743 GTGTCATTCCCCCGGAACTAGGCAACATGGAATCCATGATCAG-TTTAGCTTTAAGTGAG 801
||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||| ||
Sbjct 491 GTGTCATTCCCTCGGAACTAGGCAACATGGAATCCATGA-CAGATTTAGCGCTAAGTCAG 549
Query 802 AACAAACTTACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGACTG-TTCT 860
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 550 AACAAACTTACCGGTTCAATTCCTTCTTCCTTAGGAAATCTCAAGAACTTGA-TGGTTCT 608
Query 861 TTATCTTCATC-AGAATTATATAACTGGTGTCATTCCCCCAGAACTAGGCAACATGGAAT 919
||||||| | | |||| ||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct 609 TTATCTTTA-CGAGAACTATCTAACTGGTGTCATTCCCCCGGAACTAGGTAACATGGAAT 667
Query 920 CCATGATTGATTTAGAGTTAAGTGAGAACAATCTTACAGGTTCAATTCCTTCTTCCTT 977
|||||| ||||||| |||||| ||||||| ||||| ||||||||||||||| ||||
Sbjct 668 CCATGACAGATTTAGCTTTAAGTCAGAACAAACTTACCGGTTCAATTCCTTCTACCTT 725
Score = 377 bits (204), Expect = 3e-103
Identities = 289/329 (88%), Gaps = 10/329 (3%)
Strand=Plus/Plus
Query 510 TAATAACAAACTTGCCAGTTCAATTCCTTCATCCATAGGGAAA-CTCAAGAACTTGACGG 568
||| ||||||||| || ||||||||||||| ||| || ||||| |||||||| |||||
Sbjct 978 TAACAACAAACTTACCGGTTCAATTCCTTCTTCCTTA-GGAAATCTCAAGAATTTGACTA 1036
Query 569 TTCTTTATCTTTATAAGAACTATCTAACTGGTGTCATTCCCCCGGATCTAGGCAACATGG 628
||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 1037 TTCTTTATCTTTACGAGAACTATTTAACTGGTGTCATTCCCCCGGAACTAGGCAACATGG 1096
Query 629 AATAC-ATGATTGATTTAGAGTT-AAGTCATAACAAACTTACCGGTTCAATTCCTTCTTC 686
||| | |||||||||||| |||| || | | |||||||||||||||||||||||||||||
Sbjct 1097 AAT-CGATGATTGATTTACAGTTGAA-TAACAACAAACTTACCGGTTCAATTCCTTCTTC 1154
Query 687 CTTAGGAAATCTCAAGAACTTGACGGT-TCTTTATCTTCATCACAATTATCTT-ACTGGT 744
||| |||||||||||||||||||| || |||||||||| | | |||||| || ||||||
Sbjct 1155 CTTCGGAAATCTCAAGAACTTGAC-GTATCTTTATCTTTACCTGAATTAT-TTAACTGGT 1212
Query 745 GTCATTCCCCCGGAACTAGGCAACATGGAATCCATGATCAGTTTAGCTTTAAGTGAGAAC 804
|||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct 1213 GTCATTCCCCAGGAGCTAGGCAACATGGAATCCATGATCAATTTAGATTTAAGTCAGAAC 1272
Query 805 AAACTTACCGGTTCAATTCCTTCTTCCTT 833
|||||||| ||||| ||||| ||||||
Sbjct 1273 AAACTTACAGGTTCTGTTCCTGATTCCTT 1301
Score = 191 bits (103), Expect = 4e-47
Identities = 135/151 (89%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 827 CTTCCTTAGGAAATCTCAAGAACTTGACTGTTCTTTATCTTCATCAGAATTATATAACTG 886
|||||||||||||||||||||||||||| || ||||||||||| || || ||| |||||
Sbjct 431 CTTCCTTAGGAAATCTCAAGAACTTGACGGTACTTTATCTTCACCAAAACTATCTAACTA 490
Query 887 GTGTCATTCCCCCAGAACTAGGCAACATGGAATCCATGATTGATTTAGAGTTAAGTGAGA 946
||||||||||| | ||||||||||||||||||||||||| ||||||| | ||||| |||
Sbjct 491 GTGTCATTCCCTCGGAACTAGGCAACATGGAATCCATGACAGATTTAGCGCTAAGTCAGA 550
Query 947 ACAATCTTACAGGTTCAATTCCTTCTTCCTT 977
|||| ||||| ||||||||||||||||||||
Sbjct 551 ACAAACTTACCGGTTCAATTCCTTCTTCCTT 581
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 152708174492
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5