BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg922854

Length=238
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G59810.1 | Symbols: ATSBT5.4, SBT5.4 | Subtilase family prot...   246    6e-65


> AT5G59810.1 | Symbols: ATSBT5.4, SBT5.4 | Subtilase family protein 
| chr5:24096815-24100557 REVERSE LENGTH=2587
Length=2587

 Score =  246 bits (133),  Expect = 6e-65
 Identities = 157/168 (93%), Gaps = 3/168 (2%)
 Strand=Plus/Plus

Query  6     AAATTGACTACAAAGATGGTGAAGCTTTTGTTTTCGTACCTAAGTTCCACGAAAGATCCC  65
             ||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||
Sbjct  1588  AAATTGACTACAAAGATGGTGAAAC-TTTGTTTTCTTACCTAAGTTCCACAAAAGATCCC  1646

Query  66    AAAGGTTACATCAAAGCACCAACCGCTAC-CTTGAACACAAAGCCTGCTCCTTTCATGGC  124
             |||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||
Sbjct  1647  AAAGGTTACATCAAAGCACCTACCGCTACGC-TGAACACAAAGCCTGCTCCTTTCATGGC  1705

Query  125   CTCTTTCTCTTCCAGAGGACCTAACTCCGTTACACCAGGGATCCTCAA  172
             ||||||||||||||||||||| ||| || | |||||||||||||||||
Sbjct  1706  CTCTTTCTCTTCCAGAGGACCAAACACCATCACACCAGGGATCCTCAA  1753



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10757298286


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5