BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922861 Length=307 Score E Sequences producing significant alignments: (Bits) Value AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1... 174 4e-43 > AT1G01090.1 | Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47485-49286 REVERSE LENGTH=1627 Length=1627 Score = 174 bits (94), Expect = 4e-43 Identities = 107/113 (95%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 55 AAGGATTGGAGTTGTATGAAGACATGATACTAGGTAGATCTGTCGAAGACATGTGTGCTC 114 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 368 AAGGATTGGAGTTGTATGAAGATATGATACTAGGTAGATCTTTCGAAGACATGTGTGCTC 427 Query 115 AAATATATTACAGAGAG-AAGATGTTTGGTTTTGTTCACTTGTACAATGGCCA 166 |||| |||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct 428 AAATGTATTACCGAG-GCAAGATGTTTGGTTTTGTTCACTTGTACAATGGCCA 479 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14225772967 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5