BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922958 Length=690 Score E Sequences producing significant alignments: (Bits) Value AT1G45170.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1003 0.0 > AT1G45170.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:17095980-17098006 REVERSE LENGTH=991 Length=991 Score = 1003 bits (543), Expect = 0.0 Identities = 623/663 (94%), Gaps = 0/663 (0%) Strand=Plus/Plus Query 27 GATGAAAGCTTCTTTCAAGGGAAAGTTCGATGTCGACAAGAGCGGTGGCGTTGCTTCGCT 86 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 99 GATGAAGGCTTCTTTCAAGGGAAAGTTCGATGTCGACAAGAGCGGTAGCGTTGCTTCGCT 158 Query 87 TTCCTTCAACGCCGGCAATGCCAAGCTACGCGCCACCATGACTGATACTTCCCTCGTCGC 146 | ||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||| Sbjct 159 TACCTTCAACGCCGGCAATGCTAAGCTACGAGCCACCATGACTGATGCTTCCTTCGTCGC 218 Query 147 CGGTCCTAGCTTGAACGGCCTCTCTCTCGCCGTCGAGAAGCCTGGCTTCTTCATCATTGA 206 |||||||||||| || || |||||||||||||| ||||||||||||||||||||||| || Sbjct 219 CGGTCCTAGCTTTAATGGTCTCTCTCTCGCCGTTGAGAAGCCTGGCTTCTTCATCATCGA 278 Query 207 CTACAACGTCCCTAAAAAGGATGTGAGGTTTCAGTTCATGAACACTGTTAGAATTGCAGA 266 |||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||| Sbjct 279 CTACAACGTCCCTAAAAAGGATGTTAGGTTTCAGTTTATGAACACTATCAGAATTGCAGA 338 Query 267 GAAGCCTTTGAATCTGACTTACATTCATATGAGAGGAGATAACCGGACAATTGTTGACGG 326 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 339 GAAGCCTTTGAATCTGACTTACATTCATATGAGAGGAGATAACCGGACGATTGTTGACGG 398 Query 327 GAGTCTTGTGATTGATCCGGCTAACAAGTTGTCTGCTAATTACATGGTGGGCACTAAGAA 386 |||| ||||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct 399 GAGTTTTGTGATTGATCCAGCAAACAAGTTGTCTGCTAATTACATGGTGGGTACAAAGAA 458 Query 387 CTGTAAGCTGAAGTATACTTATGTTCATGGAGGGATAGCTACATTTGAGCCATGTTATGA 446 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 459 TTGTAAGCTGAAGTATACTTATGTTCATGGAGGGATAGCTACATTTGAGCCTTGTTATGA 518 Query 447 CTTGTCTAAGAATGTGTGGGACTTTGCGGTTTCTCGGAAACTTTATGGTGGTGATAATCT 506 | || |||||||| |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 519 CGTGGCTAAGAATATGTGGGACTTTGCGATTTCTCATAAACTTTATGGTGGTGATAATCT 578 Query 507 CAAGGCCACTTATCAGACTTCTAGTAAGATGCTTGGTTTGGAATGGTCGAGGAATTCTCA 566 |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct 579 CAAGGCAACTTATCAGACTTCTAGTAAGATGCTTGGTTTGGAATGGTCGAACAACTCTAA 638 Query 567 ATCGACTGGATCTTTCAAGGTATGTGCATCAATGAATCTAGCCGAGGAATTGAAGCCACC 626 ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 639 ATCAACTGGATCTTTCAAGGTATGTGCATCAATGAATCTAGCTGAGGAATTGAAGCCGCC 698 Query 627 AAAACTGACCGCAGAAACTACATGGAACCTGGAAATTTAGCTCCCAAGAAGTCTCAATTC 686 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 699 AAAACTGACCGCAGAAACTACATGGAACCTGGAACTTTAGCTCCCAAAAAGTCTCAATTC 758 Query 687 TTT 689 ||| Sbjct 759 TTT 761 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33405707755 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5