BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923024
Length=970
Score E
Sequences producing significant alignments: (Bits) Value
AT1G47340.1 | Symbols: | F-box and associated interaction doma... 819 0.0
AT1G47350.1 | Symbols: | F-box associated ubiquitination effec... 723 0.0
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 255 4e-67
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 239 4e-62
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 230 3e-59
AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 187 2e-46
AT5G42430.1 | Symbols: | F-box and associated interaction doma... 126 3e-28
AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 87.9 2e-16
AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 71.3 2e-11
> AT1G47340.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:17353847-17356533 REVERSE LENGTH=1695
Length=1695
Score = 819 bits (443), Expect = 0.0
Identities = 768/924 (83%), Gaps = 26/924 (3%)
Strand=Plus/Plus
Query 1 TGAAGTTCCCTCCAAACAATATGAGGATTTATCCTGGTAATGACCGACGATTTTCATGTG 60
|||||||||||||| | |||| ||| |||||| || |||||||||| ||||||| ||
Sbjct 416 TGAAGTTCCCTCCAGATGGTATGCTGATCTATCCTCGTCATGACCGACGGTTTTCATTTG 475
Query 61 GCTATGCTTCTGGTTTGATGTATTTCTATGGTATGTGGATCAAACAAG-A-GCATTACGA 118
||||||| ||||||||||||||||||||||||||||||||||| | || | | |||||||
Sbjct 476 GCTATGCCTCTGGTTTGATGTATTTCTATGGTATGTGGATCAA-CGAGCACG-ATTACGA 533
Query 119 TGGAGTTCCTGTGCTATGTAACCCTATAACGGGACGGTATGCGAGCTTACCTTATCTGTA 178
|||||| |||||| |||| |||||| |||| ||||||||||||||||| |||| |||| |
Sbjct 534 TGGAGTGCCTGTGATATGCAACCCTTTAACAGGACGGTATGCGAGCTTGCCTTTTCTGGA 593
Query 179 TAGGTACAGAAGGGCGTATAGCTTTTT-GGGATTTGATCCTATTGACAAGCAATACAAGG 237
||||| |||| ||||| ||||||||| ||| |||||||| ||||| ||||| |||||||
Sbjct 594 AAGGTATAGAAAGGCGTTTAGCTTTTTCGGG-TTTGATCCGATTGAGAAGCAGTACAAGG 652
Query 238 TATTGTGCATGGCTTACCCATGTTGTCCTAATCACCATAAAATTATGACATTAGGAACTG 297
| |||| |||||||||||| | | ||||| |||| |||| | || | ||||| |||||||
Sbjct 653 TGTTGTTCATGGCTTACCCTTCTGGTCCTGATCATCATACAGTTCTAACATTTGGAACTG 712
Query 298 GAGAAATGAGTTGGAGAAGGATAAAATGTTCCT-TAAGACATGAGAATGTGAGTGAAGGG 356
|||||||||||||||||| |||| ||||||| | ||| |||||| | ||||||||| |||
Sbjct 713 GAGAAATGAGTTGGAGAAAGATAGAATGTTC-TGTAAAACATGACATTGTGAGTGATGGG 771
Query 357 ATATGCATCGATGGGGTTTTGTATTACTTAGGTGACACGTCTGAGAGGT-TGAATAAATT 415
||||| ||| ||||||| ||||||||||||| || ||||||||| | ||| | ||
Sbjct 772 ATATGTATCAATGGGGTCATGTATTACTTAGGCGATACGTCTGAGTT-TATGACTGCTTT 830
Query 416 TGTGATAGTTTGCTTTGATGTTATGTCTGAGAAATTCAAG-TTTATTTATCC-GGAAAGC 473
|||| | |||||||||||||| | |||||||| ||||| | |||||||| || |||| ||
Sbjct 831 TGTGGTTGTTTGCTTTGATGTGAGGTCTGAGACATTCA-GCTTTATTTACCCTGGAA-GC 888
Query 474 TTTTGTGAATTGATAAACTACAAGGGAAAATTAGGTGTGATTTATTATGATGATTATGA- 532
| ||||||| ||||||||||||||||||| || ||| || ||| || ||||||||| |
Sbjct 889 TATTGTGAAGTGATAAACTACAAGGGAAAGTTGGGTTTGGTTTTTTGTGATGATTAC-AC 947
Query 533 TGATGACGCTATTGAGTTGCGTTTGTGGGTTCTAGAGGATGCGGAGAAAC-AGGAATGGT 591
|||||| ||||||||||||||| |||||||||||||||| ||||||| || | ||||
Sbjct 948 TGATGATGCTATTGAGTTGCGTCTGTGGGTTCTAGAGGACAAGGAGAAAATAG-AGTGGT 1006
Query 592 TGGAA-TATGCCTACACTTTGAGGGATGATAAATTCTTAGATCATTACGTTTCCGTCGTG 650
|| |||||||||| |||| |||||| ||||||| | ||||||||||||| | ||
Sbjct 1007 CA-AAGTATGCCTACAAGTTGAAGGATGAGAAATTCTCGGCTCATTACGTTTCCATTGTT 1065
Query 651 GGAGTGACTGCTTCGGGTGAAATTGTTTTGTCGATGGGAGATTTTACATTTAAACAACCC 710
||||||| |||| ||||||| |||||| |||| |||| ||||| || | |||||||||
Sbjct 1066 GGAGTGAGTGCTGCGGGTGAGATTGTTCTGTCAATGGCTGATTTCACGTCTAAACAACCG 1125
Query 711 TTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCAAGGT 770
|||||||| ||||||| ||||||||||| |||||| |||||| || |||||| |||||
Sbjct 1126 TTTTATGTGTTCTACTACAATCCCGAAAGGAACACACTCCAATGTACTGAAATTCAAGGC 1185
Query 771 TTTGGAGAATACCATG-AAGCGGTCAACAATCCTAGTAGAGTCCACTTCTTTGTAGATGA 829
|||| |||| |||||| || | || ||| | ||| ||||||| | |||||||||||||
Sbjct 1186 TTTGAAGAACACCATGGAA-CATTCGACAGGCGTAGCAGAGTCCGCGTCTTTGTAGATGA 1244
Query 830 T-GCTAGTAGTTTCTACCGCTTTGCAGACCATGTTGAGTATCTCAATGTTAACGATCCAA 888
| || |||||||||||||| ||||| ||||||||||||||||| |||||| |||| ||||
Sbjct 1245 TTGC-AGTAGTTTCTACCGTTTTGCTGACCATGTTGAGTATCTGAATGTTGACGAACCAA 1303
Query 889 AGCTACTTAAGTC-AAACATCTAT 911
|||| || ||||| ||| ||||||
Sbjct 1304 AGCTGCTGAAGTCCAAA-ATCTAT 1326
> AT1G47350.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr1:17358447-17360722 REVERSE LENGTH=1587
Length=1587
Score = 723 bits (391), Expect = 0.0
Identities = 703/849 (83%), Gaps = 40/849 (5%)
Strand=Plus/Plus
Query 1 TGAAGTTCCCTCCAAACAATATG-AGGATTTATCCTGGTAATGACCGACGATTTTCATGT 59
|||||||||||||| | |||| | ||| |||||| |||| |||||||| |||||||||
Sbjct 479 TGAAGTTCCCTCCAGATGGTATGCA-GATCTATCCTCGTAACGACCGACGGTTTTCATGT 537
Query 60 GGCTATGCTTCTGGTTTGATGTATTTCTATGGTATGTGGATCAAACAAGA-GCATTACGA 118
|||||||| |||||| |||||||||||||||||||| |||||||| | || | |||||||
Sbjct 538 GGCTATGCGTCTGGTATGATGTATTTCTATGGTATGCGGATCAAAGAGGATG-ATTACGA 596
Query 119 TGGAGTTCCTGTGCTATGTAACCCTATAACGGGACGGTATGCGAGCTTACCT--TATCTG 176
|||||| |||||||||||||||||||||||||||| ||||||| ||| ||| ||| ||
Sbjct 597 TGGAGTGCCTGTGCTATGTAACCCTATAACGGGACATTATGCGACCTTGCCTGCTAT-TG 655
Query 177 TATAGGTACAGA-AGGGCGTATAGCTTTTT-GGGATTTGATCCTATTGACAAGCAATACA 234
| |||| ||| | | ||| ||||||||| ||| | |||||| ||||||||||||| ||
Sbjct 656 CA-AGGTTTAGACAAG-CGTTTAGCTTTTTCGGG-TATGATCCGATTGACAAGCAATTCA 712
Query 235 AGGTATTGT----G--CATGGCTTACCCATGTTGTCCTAATCACCATAAAATTATGACA- 287
||||||||| | |||||||||||||||| ||||| |||| |||||| || ||| |
Sbjct 713 AGGTATTGTTCATGATCATGGCTTACCCATGTAGTCCTGATCATCATAAAGTTCTGAAAC 772
Query 288 TTAGGAACTGGAGAAATGAGTTGGAGAAGGAT-AAAATGTTCCTTAAGACATGAGAATG- 345
|| |||| ||||||||||||||||||||| || |||| || ||||||||||||| |||
Sbjct 773 TT-GGAAGTGGAGAAATGAGTTGGAGAAG-ATTAAAACGTACCTTAAGACATGA-AATTA 829
Query 346 TGAGTGAAGGGATATGCATCGATGGGGTTTTGTATTACTTAGGTGACACGTCTGAGAGGT 405
|||||||||| ||||||||| |||||||| |||||||||| ||||| ||||||||| | |
Sbjct 830 TGAGTGAAGGTATATGCATCAATGGGGTTGTGTATTACTTGGGTGATACGTCTGAG-GTT 888
Query 406 T-GAATAAATTTGTGATAGTTTGCTTTGATGTTATGTCTGAGAAATTCAAG-TTTATTTA 463
| || | |||||| |||||||||||||||| | || ||||| ||||| | ||| ||||
Sbjct 889 TTGACTTCTTTTGTGGTAGTTTGCTTTGATGTGAGGTATGAGACATTCA-GCTTTCTTTA 947
Query 464 TCC-GGAAAGCTTTTGTGAATTGATAAACTACAAGGGAAAATTAGGTGTGATTTATTATG 522
|| |||| ||| ||||||| ||||||| ||||| ||||| || ||| || ||| |||||
Sbjct 948 CCCTGGAA-GCTATTGTGAACTGATAAATTACAAAGGAAAGTTGGGTTTGGTTTTTTATG 1006
Query 523 ATGATTATGATGATGACGCTATTGAGTTGCGT-TTGTGGGTTCTAGAGGATGCGGAGAAA 581
||||||| |||| ||| | ||| |||||||| || |||||||||||||| | |||||||
Sbjct 1007 ATGATTACGATGGTGATACCATTAAGTTGCGTCTT-TGGGTTCTAGAGGACGAGGAGAAA 1065
Query 582 CAGGAATGGTTGGAATATGCCTACACT-TTGAGGGATGATAAATTCTTAGATCATTACGT 640
| ||||||| | ||||||||||| | ||| ||||||||| ||| || | |||||| ||
Sbjct 1066 AATGAATGGTCGAAATATGCCTACG-TGTTGTGGGATGATATATTTTTGGCTCATTATGT 1124
Query 641 TTCCGTCGTGGGAGTGACTGCTTCGGGTGAAATTGTTTTGTCGATGGGAGATTTTACATT 700
||| || || |||||||||||| |||||||||||||||||||||||| |||| |||||
Sbjct 1125 TTCGGTAGTTGGAGTGACTGCTACGGGTGAAATTGTTTTGTCGATGGCTGATTATACATC 1184
Query 701 TAAACAACCCTTTTATGTTTTCTACT-TCAATCCC-GAAAAGAACACTCTCCAACGTGTT 758
||| |||||||| ||| ||||||||| | || ||| |||| ||| ||||| ||| |||||
Sbjct 1185 TAAGCAACCCTTCTATATTTTCTACTAT-AA-CCCTGAAATGAATACTCTTCAATGTGTT 1242
Query 759 GAAATCCAAGGTTTTGGAGAATACCATGAAGCGGTCAA-CAATCCTAGTAGAGTCCACTT 817
||||| | ||||||||||||||||||||||||| || |||| ||||||||| | |
Sbjct 1243 GAAATTCGAGGTTTTGGAGAATACCATGAAGCG-TCGGGCAATAGGAGTAGAGTCTGCGT 1301
Query 818 CTTTGTAGA 826
|||||||||
Sbjct 1302 CTTTGTAGA 1310
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 255 bits (138), Expect = 4e-67
Identities = 331/418 (79%), Gaps = 38/418 (9%)
Strand=Plus/Plus
Query 133 TATGTAACCCTA-TAACGGGACGGTATGCGAGCTTACCTTATCTGTATAGGTACAGAAGG 191
|||||||||| | | || ||||||||||| | ||||||| ||| ||||| ||||||| |
Sbjct 416 TATGTAACCCCACT-ACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAAAG 474
Query 192 GCGTATAGCTTTTT-GGGATTTGATCCTATTGACAAGCAATACAAGGTATTGTGCATGGC 250
|||| ||||||||| ||| ||||| || ||||||||||||||||||| ||||| |||||
Sbjct 475 GCGTTTAGCTTTTTCGGG-TTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATGGT 533
Query 251 TTACCCATGTTGTCCTAATCACCA-TAAAATTATGACATTAGGAACTGGAGAAATG-AGT 308
||| |||| | ||||| ||| | || | |||| ||||| ||| ||||||| || ||
Sbjct 534 TTATCCATCTGGTCCTGGTCA-TAGTAGAGTTATTACATTTGGAGCTGGAGATCTGAAG- 591
Query 309 TGGAGAAGGATAAAATGTTCCTTAAGACATGAGAATGTGAGTGAAGGGATATGCATCGAT 368
|||||||||||||||||||| || ||||||| | | |||||||||| |||| ||| ||
Sbjct 592 TGGAGAAGGATAAAATGTTCATTGCGACATGATATTAAGAGTGAAGGGGTATGTATCAAT 651
Query 369 GGGGTTTTGTATTACTTAGGTGACACGTCTGA--G-AG--G--TT---G--AAT-A---A 412
||||||||||||||||||||||||||||| || | || | || | ||| | |
Sbjct 652 GGGGTTTTGTATTACTTAGGTGACACGTCGGATTGGAGTCGCGTTAATGGTAATCACGTA 711
Query 413 AT-T-TG-T-----GATAGTTTGCTTTGATGTTATGTCTGAGAAATTCAAGTTTATTTAT 464
| | || | |||||||||||||||||||| |||||| ||||||| |||||| |
Sbjct 712 ACGTCTGGTTATATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACCTTTATTGA- 770
Query 465 CCGGAAA--GCTTTTGT-GAATTGATAAACTACAAGGGAAAATTAGGTGTGATTTATT 519
| | ||| | |||||| || ||||||||||||||||| ||||||| |||||||||||
Sbjct 771 C-GTAAAAAGGTTTTGTCGA-TTGATAAACTACAAGGGCAAATTAGCTGTGATTTATT 826
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 239 bits (129), Expect = 4e-62
Identities = 213/253 (84%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 531 GATGATGACGCTATTGAGTTGCGTTTGTGGGTTCTAGAGGATGCGGAGAAACAGGAATGG 590
||||||||| || |||||||||| |||||||||||||||||| |||||||| |||||
Sbjct 1037 GATGATGACATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACAGCAATGG 1096
Query 591 TTGGAATATGCCTACACTTTGAGGGATGATAAATTCTT-AGATCATTACGTTTCCGTCG- 648
| | ||||||||||||||| || ||||||| |||||| | || | |||||| |||
Sbjct 1097 TCGAAATATGCCTACACTTGGACCGATGATAGATTCTTCCG-TCGTCGTGTTTCCATCGC 1155
Query 649 TGGGAGTGACTGCTTCGGGTGAAATTGT-TTTGTCGATG-GGAGATTTTACATTTAAACA 706
| |||| |||||||||||||||||| || ||| |||||| | | | |||| ||| ||
Sbjct 1156 T-GGAGGGACTGCTTCGGGTGAAATAGTGTTT-TCGATGCTCA-AATATACACCTAAGCA 1212
Query 707 ACCCTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCA 766
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1213 ACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCA 1272
Query 767 AGGTTTTGGAGAA 779
||||||||| |||
Sbjct 1273 AGGTTTTGGTGAA 1285
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 230 bits (124), Expect = 3e-59
Identities = 210/251 (84%), Gaps = 8/251 (3%)
Strand=Plus/Plus
Query 533 TGATGACGCTATTGAGTTGCGTTTGTGGGTTCTAGAGGATGCGGAGAAACAGGAATGGT- 591
||||| | ||| ||||||| | ||||||||||||| |||| ||||||||||||||||
Sbjct 1248 TGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGAAACAGGAATGGTC 1307
Query 592 TGGAATATGCCTACACTTTGAGGGATGATAAATTCTTAGATCATTACGTTTCCGTCG-TG 650
| ||||||||||||||| || ||||||| |||||| ||| | || ||||| | | |
Sbjct 1308 T-AAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCACCTTTCCATTGCT- 1365
Query 651 GGAGTGACTGCTTCGGGTGAAATTGT-TTTGTCGATG-GGAGATTTTACATTTAAACAAC 708
|||| ||||||||||||||||| || ||| |||||| | | | | |||| ||||||||
Sbjct 1366 GGAGCCACTGCTTCGGGTGAAATAGTGTTT-TCGATGCGCA-AGTACACATCTAAACAAC 1423
Query 709 CCTTTTATGTTTTCTACTTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCAAG 768
| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 1424 CATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTGAAATCCAAG 1483
Query 769 GTTTTGGAGAA 779
||||||| |||
Sbjct 1484 GTTTTGGTGAA 1494
> AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744
FORWARD LENGTH=1275
Length=1275
Score = 187 bits (101), Expect = 2e-46
Identities = 192/234 (82%), Gaps = 14/234 (6%)
Strand=Plus/Plus
Query 556 TGTGGGTTCTAGAGGATGCGGAGAAACAGGAATGGTTGGAATATGCCTACACTTTGAGGG 615
|||||||||||||||||| |||||||||||||||| | ||||||||||||||| || |
Sbjct 887 TGTGGGTTCTAGAGGATGTAGAGAAACAGGAATGGTAGAAATATGCCTACACTTGGACCG 946
Query 616 ATGATAAATTC-TTAGATCAT--T-ACGTTTCCGTCG-T---GGGAGTGACTGCTTCGGG 667
|||||| |||| || | || | | | |||||||| | | || || |||||| |||
Sbjct 947 ATGATATATTCTTTCG-TCGTCGTGAGGTTTCCGTTGCTCCAACGACTG-CTGCTTGGGG 1004
Query 668 TGAAATTGT-TTTGTCGATGGGAGATTTTACAT-TTAAACAACCCTTTTATGTTTTCTAC 725
||| || || ||| |||||| | || | ||| | | |||||| |||||||||||||||
Sbjct 1005 TGACATAGTCTTT-TCGATGTGTGAGTATAC-TCCTGGACAACCATTTTATGTTTTCTAC 1062
Query 726 TTCAATCCCGAAAAGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGAGAA 779
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1063 TTCAATCCCGAAAAGAGCACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAA 1116
> AT5G42430.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16971312-16972499 REVERSE LENGTH=1188
Length=1188
Score = 126 bits (68), Expect = 3e-28
Identities = 187/241 (78%), Gaps = 21/241 (9%)
Strand=Plus/Plus
Query 556 TGTGGGTTCTAGAGGATGCGGAGAAACAGGAATGGTTGGA-ATATGCCTACACTTTGAGG 614
|||||||||||||||||| |||||||||||||||| | || || ||||||||||||
Sbjct 827 TGTGGGTTCTAGAGGATGTGGAGAAACAGGAATGG-ACAACATCTGTGTACACTTTGAGG 885
Query 615 GAT---GATAAATTC-TT-A-GATCATTACG---TTTCCGTCG-TGGGAGTGACTGCTTC 664
||| |||| | || || | | | | |||| ||| | | ||||| | |||||| |
Sbjct 886 GATGAGGATAGAGTCGTTAAGGTTTACTACGATCTTTTTATTGTTGGGA-TAACTGCTAC 944
Query 665 GGGTGAAATTGTTTTGTCGATGGGAGATTTTACATTTAAACAACCCTTTTATGTTTTCTA 724
||||||||||||||| ||| | | | | || | | | || |||||||| |||||
Sbjct 945 AGGTGAAATTGTTTTGGCGA-AGAAAAAGGT--ATGT--A-AGCCGTTTTATGTCTTCTA 998
Query 725 CTTCAATCCCGAAAAGAACACTCTCC-AACGTGTTGAAATCCAAGGTTTTGGAGAATACC 783
||| |||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 999 CTTTAATCTCGAAAGGAACACTCTCCTAA-GTGTTGAAATCCAAGGTTTTGGAGAATACC 1057
Query 784 A 784
|
Sbjct 1058 A 1058
> AT1G30945.1 | Symbols: | pseudogene, hypothetical protein |
chr1:11026338-11026784 REVERSE LENGTH=447
Length=447
Score = 87.9 bits (47), Expect = 2e-16
Identities = 212/286 (74%), Gaps = 33/286 (12%)
Strand=Plus/Plus
Query 481 AATTGATAAACTACAAGGGAAAATTAGGTGTGATTTA-TT-ATG-ATGATTATGATGATG 537
|||||||||||||||| || |||||||||| |||| | || | || || ||| || ||
Sbjct 152 AATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGTG 211
Query 538 ---A-CGCTATTGAGTTGCGTTTGTGGGTTCTAGAGGATG-CGGAGAAACAGGAATGGTT 592
| | | ||||||| ||| |||||||||||||||||| | |||||||| |||||| |
Sbjct 212 TATATC-CCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTC-GAGAAACACGAATGG-T 268
Query 593 GGA-ATATGCCTACACTTTG-AGG-GATGA-T-AAATTC-TTAG-ATCATTAC---GTTT 642
|| | ||| ||| ||||| || || | | || ||| || | | ||| |||
Sbjct 269 CGAGACATGTTTACTCTTTGCCGGAGACCATTGAATTTCAGCAGTGTAACTACAATATTT 328
Query 643 CCG-TCGTGGGAGTGACTGCT-TCGGGTGAAATTGTTTTGTC-GATGGGAGAT-T-T-TA 696
|| | |||||| ||| |||| | |||||||||||||| || || | | || | | ||
Sbjct 329 GCGTTGGTGGGA-TGAATGCTAT-AGGTGAAATTGTTTTTTCGGA-GTCATATATATCTA 385
Query 697 CATTTAAACAACCCTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 742
|| | | |||| ||||||||||||||||||||||||||||||||
Sbjct 386 CA--TCCA-AACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAA 428
> AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972
REVERSE LENGTH=921
Length=921
Score = 71.3 bits (38), Expect = 2e-11
Identities = 40/41 (98%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 740 GAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGAGAAT 780
||||||| |||||||||||||||||||||||||||||||||
Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAAT 625
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47471268915
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5