BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg923031

Length=232
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G61380.1 | Symbols:  | Phosphatidylinositol N-acetyglucosami...   145    2e-34


> AT3G61380.1 | Symbols:  | Phosphatidylinositol N-acetyglucosaminlytransferase 
subunit P-related | chr3:22708482-22711279 
REVERSE LENGTH=2444
Length=2444

 Score =  145 bits (78),  Expect = 2e-34
 Identities = 92/99 (93%), Gaps = 0/99 (0%)
 Strand=Plus/Plus

Query  1     TTTAGATCAGATAGTAAGAAAAGACATGGCTAGAACTGGAAGCTGGATGGATCTCCGGTT  60
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1968  TTTAGATCAGATAGTAAAAAAAGACATGGCTAGAACTGGAAGCTGGATGGATCTCCGGTT  2027

Query  61    CGAAATCGGTTGCCTTTGTTCTTATACAAGTGAAATGAT  99
              || |||||||| ||  |||| |||||||||||||||||
Sbjct  2028  TGAGATCGGTTGTCTAGGTTCCTATACAAGTGAAATGAT  2066



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10455691792


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5