BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923145 Length=289 Score E Sequences producing significant alignments: (Bits) Value AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fam... 438 1e-122 > AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:17796335-17796784 FORWARD LENGTH=450 Length=450 Score = 438 bits (237), Expect = 1e-122 Identities = 267/282 (95%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 8 GAGAAGAGAAAATATGTCCGACGGAAATTTCCCAGAACGTCCAGGCGAACCAGAGTGCAG 67 |||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||| Sbjct 2 GAGAAGAGAAAATATGTCTGAAGAAAAATTCCCAGAACGTCCAGGCGAACCAGAGTGCAG 61 Query 68 CTATTATCTTAGAACTGGAAACTGTTATCTGAAACAAAATTGCAAATACCATCACCCCAA 127 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 62 CTATTATCTTAGAACTGGAAACTGTTATCTGAAACAAAACTGCAAATACCATCACCCGAA 121 Query 128 GAATATAACGCCGAGAGAGCCTCCATGTCCTCTCAATGACAAGGGCTTACCATTAAGACC 187 ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 122 GAATATAACGCCGAGCGAGCCTCAATGTACTCTCAATGACAAGGGCTTACCATTAAGACC 181 Query 188 TGATCAAGCCATTTGCCCACATTACAGTCGCTTCGGCATTTGCAAATCCGGTCCGACTTG 247 || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 182 TGGTCAAGCCATTTGCCCGCATTACAGTCGCTTCGGCATTTGCAGATCCGGTCCGACTTG 241 Query 248 TAAATTCGACCATTCTACCTAACCATCATCCTCAGCTCGCAA 289 |||||||||||||| ||||||||||||||||||| || |||| Sbjct 242 TAAATTCGACCATTTTACCTAACCATCATCCTCAACTTGCAA 283 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13320953485 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5