BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923153 Length=1324 Score E Sequences producing significant alignments: (Bits) Value AT1G48260.1 | Symbols: CIPK17, SnRK3.21 | CBL-interacting prote... 1925 0.0 AT3G17510.1 | Symbols: CIPK1, SnRK3.16 | CBL-interacting protei... 913 0.0 > AT1G48260.1 | Symbols: CIPK17, SnRK3.21 | CBL-interacting protein kinase 17 | chr1:17813976-17817283 REVERSE LENGTH=1606 Length=1606 Score = 1925 bits (1042), Expect = 0.0 Identities = 1247/1343 (93%), Gaps = 26/1343 (2%) Strand=Plus/Plus Query 3 ATCCGGAA-TCTGAATTGGATGGTGATAAAGGGAATGCTTGTTGGTAAATACGAGCTTGG 61 |||||||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 39 ATCCGGAAGTCTAAATTGGATGGTGATAAAGGGAATGCGTGTTGGTAAGTACGAGCTTGG 98 Query 62 GAGGACACTTGGAGAGGGAAATTCCGCAAAGGTTAAATTCGCTATAGATACTATTTCCGG 121 ||||||||| |||||||||||||||||||| |||||||| |||||||||||| || |||| Sbjct 99 GAGGACACTCGGAGAGGGAAATTCCGCAAAAGTTAAATTTGCTATAGATACTCTTACCGG 158 Query 122 CGAACCATTCGCCATCAAAATCATCGATAAGTCGCGTATCACTCGTATTAACGTCTCTTT 181 |||| |||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||| Sbjct 159 CGAATCATTCGCCATCAAAATCATCGAGAAGTCGTGTATCACACGTCTTAACGTCTCTTT 218 Query 182 TCAGATCAAGAGAGAGATTCGAACACTCAAAGTTTTAAAGCATCCAAACATTGTCAGATT 241 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 219 TCAGATTAAGAGAGAGATTCGAACACTCAAAGTTTTGAAGCATCCAAACATTGTCCGATT 278 Query 242 ACATGAGGTCTTGGCAAGCAAAACCAAGATTTACATGGTTCTGGAATGTGTCACTGGGGG 301 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 279 ACATGAGGTCTTGGCTAGCAAAACCAAGATTTACATGGTTCTGGAATGTGTCACTGGAGG 338 Query 302 AGACTTATTTGACAGAATTGTCTCCAAAGGAAAGCTTTCTGAAACAGAGGGACTAAAAAT 361 |||||||||||||||||||||||| |||||||||||||| |||||| | |||| |||||| Sbjct 339 AGACTTATTTGACAGAATTGTCTCGAAAGGAAAGCTTTCGGAAACACAAGGACGAAAAAT 398 Query 362 GTTTCAGCAGTTGATTGATGGAATCAGCTATTGTCATAACAAGGGAGTTTTTCACAGAGA 421 |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| || Sbjct 399 GTTTCAGCAGTTGATTGATGGAGTCAGCTATTGTCATAACAAGGGCGTTTTTCACAGGGA 458 Query 422 TCTCAAGCTAGAGAATGTTCTTCTTGATGCAAAGGGTCACATTAAGATCACTGATTTTGG 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459 TCTCAAGCTAGAGAATGTTCTTCTTGATGCAAAGGGTCACATTAAGATCACTGATTTTGG 518 Query 482 CCTTAGTGCTCTGCCTCAACATTTTAGGGAAGATGGGTTGCTACATACAACTTGTGGTAG 541 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 519 CCTTAGTGCTCTGTCTCAACATTATAGGGAAGATGGGTTGCTACATACAACTTGTGGTAG 578 Query 542 TCCTAACTATGTCGCGCCTGAGGTTCTAGCTAACAAAGGG-TATGATGGTGCAGCATCAG 600 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 579 TCCTAACTATGTCGCGCCTGAGGTTCTAGCTAA-TGAGGGCTATGATGGTGCAGCATCAG 637 Query 601 ATATATGGTCATGTGGAGTAATCTTGTATGTTATTCTTACGGGATGTCTCCCTTTTGATG 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 638 ATATATGGTCATGTGGAGTAATCTTGTATGTTATTCTTACGGGATGTCTCCCTTTTGATG 697 Query 661 ATGCTAACCTTGCAGTTATTTGCCGGAAGATATTCAAAGGGGATCCCCCAATACCTAGAT 720 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 698 ATGCAAACCTTGCAGTTATTTGCCGGAAGATATTCAAAGGGGATCCCCCAATACCTAGAT 757 Query 721 GGATATCACCTGGT-GCTAAAACCATGATCAAGAGAATGCTTGATCC-AAGTCCAGTCAC 778 ||||||||| ||| |||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 758 GGATATCAC-TGGGAGCTAAAACTATGATCAAGAGAATGCTTGATCCTAA-TCCAGTCAC 815 Query 779 GAGGATGACAATCGCAAATATTAAGGCTAATGATTGGTTCAAACATGACTACACTCCTTC 838 |||| ||||||||||| ||| |||||| |||||||||| |||||||||||||||||||| Sbjct 816 GAGGGTGACAATCGCAGGTATAAAGGCTCATGATTGGTTTAAACATGACTACACTCCTTC 875 Query 839 AAAATACGATGATGATGATGATGCATACTTAATCCAAGAAGATGG----ATC-TGAAG-A 892 ||| |||||||| || ||||||| |||||| ||||||||||||| || ||||| | Sbjct 876 AAACTACGATGACGACGATGATGTATACTTGATCCAAGAAGATGTTTTTATGATGAAGGA 935 Query 893 A---GAA-AAGAG-----CCCTGATTCTCCAACCATTATCAACGCATTTAAGTTGATTGG 943 | ||| ||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 936 ATATGAAGAAGAGAAGAGCCCTGATTCTCCAACCATTATCAACGCTTTTCAGTTGATTGG 995 Query 944 AATGTCATCATTTCTCGACCTCTCAGGTTTCTTTGAGAAAGAGAAAGTATCAGAGAGACA 1003 |||||| || |||||||||||||||||||||||||||| ||||||| |||||||||| || Sbjct 996 AATGTCCTCGTTTCTCGACCTCTCAGGTTTCTTTGAGACAGAGAAATTATCAGAGAGGCA 1055 Query 1004 GATAAGATTCACGTCAAATAGCTTAGCCATAGATTTGTTGGAGAAAATCGAAACGATCTT 1063 ||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||| || Sbjct 1056 GATAAGATTCACGTCAAATAGTTTAGCTAAAGATTTGTTGGAGAACATCGAAACGAT-TT 1114 Query 1064 T-ACAGAGATGGG-TTTCTGCTTACAGAAGAAACACGCAAGGTTAAAAGCAATCAAAGAA 1121 | || |||||||| ||| || |||||||||||||| |||| ||||||||||||||||||| Sbjct 1115 TCACGGAGATGGGCTTT-TGTTTACAGAAGAAACATGCAAAGTTAAAAGCAATCAAAGAA 1173 Query 1122 GAAAGCACTCAAAAAGGGCAATGCGGTTTATCAGTAACGGCTGAGGTTTTCGAGATAAGT 1181 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1174 GAAAGCACTCAAAAAAGGCAATGCGGTTTATCGGTAACGGCTGAGGTTTTCGAGATAAGT 1233 Query 1182 CCGTCCCTAAATGTGGTTGAACTAAGAAAATCACATGGTGATTTGTCTCTATATAAACAG 1241 |||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1234 CCGTCCCTGAATGTGGTTGAACTAAGAAAATCACATGGCGATTCGTCTCTATATAAACAG 1293 Query 1242 TTGTACGAGAGATTATTGAATGAACTGGGCTCATCATCACAAGTACAGGAGCTTTTAACG 1301 ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 1294 TTGTACGAGCGATTATTGAATGAGCTGGGCTCATCATCACAAGTACAGGAGCTTTTAGCG 1353 Query 1302 TAGCCAATAGCAGAAAATATGTC 1324 |||||||||||||||| |||||| Sbjct 1354 TAGCCAATAGCAGAAATTATGTC 1376 > AT3G17510.1 | Symbols: CIPK1, SnRK3.16 | CBL-interacting protein kinase 1 | chr3:5988991-5992912 REVERSE LENGTH=1938 Length=1938 Score = 913 bits (494), Expect = 0.0 Identities = 1043/1298 (80%), Gaps = 78/1298 (6%) Strand=Plus/Plus Query 30 AAGGGAATGCTTGTTGGTAAATACGAGCTTGGGAGGACACTTGGAGAGGG-AAATTCCGC 88 |||||||||| | | || ||||||||||| |||||||| || || ||||| || ||| | Sbjct 322 AAGGGAATGCGTCTGGGGAAATACGAGCTAGGGAGGACGCTCGGCGAGGGTAATTTCGGT 381 Query 89 AAAGGTTAAATTCGCTATAGATACTATTTCCGG-CGA-ACCATTCGCCATCAAAATCATC 146 ||| ||||||||||||| |||||| | ||||| | | || |||||| | ||||||||| Sbjct 382 AAA-GTTAAATTCGCTAAAGATACCGTCTCCGGTC-ATTCC-TTCGCCGTTAAAATCATC 438 Query 147 GATAAGTCGCGTATCACTCGTAT-T-AACGTCTCTTTTCAGATCAAGAGAGAGATTCGAA 204 || ||||| |||||| | || || | ||| |||| || ||||| || |||||||| || | Sbjct 439 GACAAGTCTCGTATCGC-CG-ATCTCAACTTCTCCTTACAGATAAAAAGAGAGATCCGGA 496 Query 205 CACTCAAAGT-TTTAAAGCATCCAAACATTGTCAGATTACATGAGGTCTTGGCAAGCAAA 263 | || ||| | || ||| ||||| ||||||| |||||||||||||||||||| |||||| Sbjct 497 CTCTGAAAATGTTGAAA-CATCCCCACATTGTTAGATTACATGAGGTCTTGGCTAGCAAA 555 Query 264 ACCAAGATTTACATGGTTCTGGAA-TGTGTCACTGGGGGAGACTTATTTGACAGAATTGT 322 || || ||| | ||||| ||||| | ||| || || ||||| || || ||||||||||| Sbjct 556 ACGAAAATTAATATGGTAATGGAACT-TGTTACCGGAGGAGAATTGTTCGACAGAATTGT 614 Query 323 CTCCAAAGGAAAGCTT-TCTGAAACAGAGGGACTAAAAATGTTTCAGCAG-TTGATTGAT 380 ||||| ||||| || | ||||| || ||| |||||||||||||||| || || ||| Sbjct 615 TTCCAACGGAAA-ATTAACAGAAACTGATGGAAGAAAAATGTTTCAGCAGCTT-ATCGAT 672 Query 381 GGAATCAGCTATTGTCATAACAAGGGAGTTTTTCACAGAGATCTCAAGCTAGAGAATGTT 440 ||||||||||| ||||||| ||| || ||||| ||||| ||||||||||||||||||||| Sbjct 673 GGAATCAGCTACTGTCATAGCAAAGGTGTTTTCCACAGGGATCTCAAGCTAGAGAATGTT 732 Query 441 CTTCTTGATGCAAAGGGTCACATTAAGATCACTGATTTTGGCCTTAGTGCTCTGCCTCAA 500 ||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| Sbjct 733 CTTCTTGATGCAAAGGGACATATAAAGATCACTGATTTTGGCCTCAGTGCTCTGCCTCAG 792 Query 501 CATTTTAGGGAAGATGGGTTGCTACATACAACTTGTGGTAGTCCTAACTATGTCGCGCCT 560 ||||||||||| || || ||| | |||||||| ||||| |||||||| || || |||||| Sbjct 793 CATTTTAGGGATGACGGATTGTTGCATACAACCTGTGGAAGTCCTAATTACGTTGCGCCT 852 Query 561 GAGGTTCTAGCTAACAAAGGGTATGATGGTGCAGCATCAGATATATGGTCATGTGGAGTA 620 |||||| ||||||||| ||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct 853 GAGGTTTTAGCTAACAGAGGCTACGATGGTGCAGCATCAGACATATGGTCCTGTGGTGTA 912 Query 621 ATCTTGTATGTTATTCTTACGGGATGTCTCCCTTTTGATGAT-GCTAACCTTGCAGTTAT 679 ||||||||||| ||||| || |||||||| ||||| || || | |||||||||||| | Sbjct 913 ATCTTGTATGTGATTCTAACCGGATGTCTTCCTTTCGACGACAGA-AACCTTGCAGTTCT 971 Query 680 TTGCCGGAAGATAT-TCAAAGGGGATCCC-CCAATACCTAGATGGATATCACCTGGTGCT 737 || || |||||||| | ||||| || ||| |||||||| |||||| |||| || ||||| Sbjct 972 TTACCAGAAGATATGT-AAAGGAGA-CCCACCAATACCAAGATGGTTATCCCCGGGTGC- 1028 Query 738 AA-AACCATGATCAAGAGAATGCTTGATCCAAGTCCAGTCACGAGGATGACAATCGCAAA 796 || ||||||||| ||||||||||||||||||| ||||||||||||||| ||| | | Sbjct 1029 AAGAACCATGATTAAGAGAATGCTTGATCCAAATCCAGTCACGAGGATCACAGTTGTGGG 1088 Query 797 TATTAAGGCTAATGATTGGTTCAAACATGACTACACTCCTTCAAAATAC-GATGATGATG 855 |||||| || | || |||||||||| ||| |||| |||||||| | | |||||||||| Sbjct 1089 TATTAAAGCCAGCGAGTGGTTCAAACTTGAGTACATTCCTTCAAT-TCCCGATGATGATG 1147 Query 856 ATGA--------T-G-CA-------T-A--CTT----AATCCAAGAAGAT-GGATCTGAA 890 | || | | || | | ||| |||||||||| | ||||| ||| Sbjct 1148 ACGAAGAAGAAGTTGACACAGACGATGATGCTTTCTCAATCCAAGAAC-TCGGATCAGAA 1206 Query 891 GAAGAAAAGAGCCCTGATTCTCCAACCATTATCAACGCATTTAAGTTGATTGGAATGTCA 950 |||| ||| || |||||| || ||||| ||||| || ||| |||| || |||||||| Sbjct 1207 GAAGGGAAGGGCAGTGATTCACCGACCATCATCAATGCGTTTCAGTTAATCGGAATGTCT 1266 Query 951 TCATTTCTCGACCTCTCAGGTTTCTTTGAGA-AAGAGAAAGTATCAGAGAGACAGA-TAA 1008 || ||||| ||||| || ||||||||||| | ||||||| ||||||||||| ||| ||| Sbjct 1267 TCCTTTCTTGACCTGTCCGGTTTCTTTGA-ACAAGAGAATGTATCAGAGAGG-AGAATAA 1324 Query 1009 GATTCACGTCAAATAGCTTAGCCATAGATTTGTTGGAGAAAATCGAAACGATCT-TTACA 1067 ||||||| |||||||||| ||| | |||||| |||||||||||||||| | | ||||| Sbjct 1325 GATTCACTTCAAATAGCTCAGCAAAAGATTTACTGGAGAAAATCGAAAC-AGCCGTTACA 1383 Query 1068 GAGATGGGTTTCTGCT-TACAGAAGAAACACGC-AAGGTTAAAAGCAAT-CAAAGAAGAA 1124 || ||||| ||| | | |||| |||||||| || ||| |||| || || ||| |||||| Sbjct 1384 GAAATGGGATTCAG-TGTACAAAAGAAACATGCCAAG-TTAAGAGTAAAACAA-GAAGAA 1440 Query 1125 AGCA-CTCAAAAAGGGCAA-TGCGGTTTATCAGTAACGGCTGAGGTTTTCGAGATAA-GT 1181 || | | || ||||| ||| | |||||||||||||| ||||||||||||||||||| | Sbjct 1441 AGAAAC-CAGAAAGGTCAAGTT-GGTTTATCAGTAACAGCTGAGGTTTTCGAGATAAAG- 1497 Query 1182 CCGTCCCTAAATGTGGTTGAACTAAGAAAATCACATGGTGATT--TGTCTCTATATAAAC 1239 ||||| || || |||||||| ||||||||||| |||| |||| ||| | |||||| || Sbjct 1498 CCGTCACTGAACGTGGTTGAGCTAAGAAAATCTTATGGCGATTCATGT-T-TATATAGAC 1555 Query 1240 AGTTGTACGAGAGATTATTGAATGAAC-TGGGCTCATC 1276 |||||||||||||| |||| || || | ||||| |||| Sbjct 1556 AGTTGTACGAGAGACTATTAAAAGA-CGTGGGCACATC 1592 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65160307410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5