BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923189
Length=3245
Score E
Sequences producing significant alignments: (Bits) Value
AT1G48540.1 | Symbols: | Outer arm dynein light chain 1 protei... 4909 0.0
AT3G17920.1 | Symbols: | Outer arm dynein light chain 1 protei... 1212 0.0
> AT1G48540.1 | Symbols: | Outer arm dynein light chain 1 protein
| chr1:17945376-17950515 FORWARD LENGTH=3466
Length=3466
Score = 4909 bits (2658), Expect = 0.0
Identities = 3061/3255 (94%), Gaps = 30/3255 (1%)
Strand=Plus/Plus
Query 2 CTTCAATTTCACCGATTTC-AATGGCAATTGTCACCGGAGATCGATATGTTGAGAAGCTA 60
||| |||||| |||||||| |||||||||||| || |||||||| |||||||||||||||
Sbjct 144 CTTGAATTTCCCCGATTTCAAATGGCAATTGTGACAGGAGATCGCTATGTTGAGAAGCTA 203
Query 61 GAGAAGTTTTTAGAAGACGAAGCTGAGTCTCTTCTAGAAGAAACCATGATTCTCAAGCTT 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 CAAAAGTTTTTAGAAGACGAAGCTGAGTCTCTTCTAGAAGAAACCATGATTCTCAAGCTT 263
Query 121 AATCCAGCTGGTCTTCACTATCTTCATCTCCGTCTCGAGTCTCTCCGTGAACTTGAACGC 180
||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 264 AATCCTGCTGGTCTTCACTATCTTCATCTCCGTCTTGACTCTCTCCGTGAACTCGAACGC 323
Query 181 ATGCTCTCCGGTGCTCCTGTTGATTACCTCCGCGCTTACGTTTCTGACTTAGGAGATTAC 240
||||||||| |||||||||||||||||| ||||| |||||||| ||| | || ||||||
Sbjct 324 ATGCTCTCCAATGCTCCTGTTGATTACCTTCGCGCCTACGTTTCCGACCTCGGCGATTAC 383
Query 241 CGCGCACTCGAGCAGCTCCGTCGTATTCTCCGAATCCTCACCTCACTTAAGGTCGTTTCC 300
||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 384 CGCGCACTCGAACAGCTCCGTCGTATTCTCCGAATCCTCACTTCTCTTAAGGTCGTTTCC 443
Query 301 ACGCTTCCTTCCCCGGCTCGTGATCCTACACCGCTCTCTCTTATTCCCTTTGGTAGGCTT 360
|| |||||||| |||||||||||||| || || ||||||||| ||||||||||||| |||
Sbjct 444 ACTCTTCCTTCTCCGGCTCGTGATCCCACGCCTCTCTCTCTTTTTCCCTTTGGTAGCCTT 503
Query 361 AAGGTTTTGGAACTTCGTCGCTGTGATTTGTCCACTTCTCCGGCCAAAGGCTTGCTTGAG 420
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| | |||
Sbjct 504 AAGGTTTTGGAACTCCGTCGCTGTGATTTGTCTACTTCTCCGGCTAAAGGCTTGATCGAG 563
Query 421 CTCCGTCACACTTTGGAAAATATCATCTGCCATAATTCCACTGATGCTCTGCGGCATGTG 480
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 564 CTCCGTCACACTTTGGAAAAGATCATCTGCCATAATTCCACTGATGCTCTGAGGCATGTC 623
Query 481 TTCGCTAGTAGAATTGCTGAGATAACGAATTCGCCGGAATGGAATAAGTTGGCGGTCATA 540
||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 624 TTCGCTAGTAGGATTGCTGAGATAACGAATTCGCCCGAGTGGAATAAGTTGGCGGTCATA 683
Query 541 TCTTGTGCTTGTAACCGTCTTGTGCTCATGGATGAGTCCTTGCAGCTTCTTCCAGCTGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 TCTTGTGCTTGTAACCGTCTTGTGCTCATGGATGAGTCCTTGCAGCTTCTTCCAGCTGCT 743
Query 601 GAGTCGCTTGATCTGAGTCGAAACAAGTTTGTGAAAGTGGATAATCTTCGGAGATGCACC 660
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 744 GAGTCTCTTGATCTCAGTCGAAACAAGTTTGTCAAAGTGGATAATCTTCGGAGATGCACC 803
Query 661 AAATTGAAGCACCTTGATCTCGGTTTCAATCATCTTAGAACAGTCTCTTACTTGAGTCAG 720
|||||||||||||||||||| || ||||||||||||||||| || ||||||||||| |||
Sbjct 804 AAATTGAAGCACCTTGATCTGGGATTCAATCATCTTAGAACGGTGTCTTACTTGAGCCAG 863
Query 721 GTATCCTGTCATCTTGTGAAACTTGTTTTGAGGAACAACGCTCTAACTACGTTGCGTGGG 780
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 864 GTATCCTGTCATCTTGTAAAACTTGTTTTGAGGAACAACGCTCTTACTACGTTGCGTGGG 923
Query 781 ATTGAGAACTTGAAGTCACTTGAAGGCCTTGATGTTTCCTACAACATTATTTCCAACTTT 840
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 924 ATTGAGAACTTGAAGTCACTCCAAGGCCTTGATGTTTCCTACAATATTATTTCCAACTTT 983
Query 841 TCAGAATTGGAGTTCCTTTGGAGTCTTTCAGTACTGAAAGAATTGTGGCTGGAAGGAAAC 900
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 984 TCAGAATTGGAGTTCCTTTGGAGTCTTTCACAACTGAAAGAATTGTGGCTGGAAGGAAAC 1043
Query 901 CCAGTGTGCTGTGCTCGATGGTACAGGGCGCATGTCTTCAGCTACATTGCTCTTCCAGAT 960
|||||||| |||||||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct 1044 CCAGTGTGTTGTGCTCGATGGTACAGGGCACATGTCTTCAGCTACGTTGCTCTCCCAGAT 1103
Query 961 GAACTGAAGCTAGATGGCAAACAGATAGGAACTAGAGAATTTTGGAAGAGGCAAATCATT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1104 GAACTGAAGCTAGATGGCAAACAGATAGGAACTAGAGAATTTTGGAAGAGGCAAATCATT 1163
Query 1021 GTAGCCCATAGGCAAAGTGAGCCTGCAAGCTACGGATTCTACTCTCCAGCTAGAGAGGAA 1080
|||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1164 GTAGCCCATAGGCAAAGTGAACCTGCAAGTTACGGATTCTATTCTCCAGCTAGAGAGGAA 1223
Query 1081 GCTAATGAAGAAGGAAGCTGGAATAGaaaaaagaaaaaGATCTGCCGTCTCGCTTCAATT 1140
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1224 GATAATGAAGAAGGAAGCTGCAATAGAAAAAAGAAAAAGATCTGCCGTCTCGCTTCAATC 1283
Query 1141 GATAGCGAAGCAGAGAGGACCTATGTGAATTCTGACTATGAGTCAGCTTCCTGTGATCAC 1200
|||||||||||||||| |||||||||||||||||| ||||||||||| | |||||||||
Sbjct 1284 CATAGCGAAGCAGAGAGCACCTATGTGAATTCTGACCATGAGTCAGCTACATGTGATCAC 1343
Query 1201 GAGAACAAAGAGAATCTGAAGTGTGATCAAGAAGCTGATATATTTGGTCTTATAAGTAAA 1260
||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||
Sbjct 1344 GAGAACAAAGAGAATATGAAGTTTAATCAAGAAGCCGATATATTTGGTCTTATAAGTAAA 1403
Query 1261 GTTGAACACCTGAAGAAAGAACGTTCTGTTCTGTGGTTGCGAGAGTTCAAGGAGTGGATG 1320
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1404 GTTGAACACCTGAAGAAAGAACGTTCTGTTTTGTGGTTGCGAGAGTTCAAGGAGTGGATG 1463
Query 1321 GATCATTCAACAGAGGATTTTGCAGATGTCAGTAAAGACGGCCAGGGTATCAATTTGGA- 1379
|||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct 1464 GATCGCTCAACAGAGGATTTTGCAGATGTCTGTAAAGACAGCCAGGGTATAAATTTGGAG 1523
Query 1380 AAAGAAGTACTATACAAAGATTAGAGAAATCTCGAGGCATCATGGT---GGAACACCGAG 1436
||| ||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct 1524 AAA-AAGTACTATACAAAGATAAGAGAAATCTCAAGGCACCATGGTGGAGGAACACCGAG 1582
Query 1437 ATATGCTTCAGGGTCTTTACGTGCTTCAAGAGCTAAGGGCTATAGGAAAAGTTTAGAATG 1496
|||| |||| ||||||||||||||||||||||||||| |||||||||||| ||| |||||
Sbjct 1583 ATATACTTCCGGGTCTTTACGTGCTTCAAGAGCTAAGAGCTATAGGAAAAATTTGGAATG 1642
Query 1497 CAATGGCTCATGTGTGGATCATAAAGCTGGTATGGATTATATAG-AGTACGTTGAAGGTA 1555
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 1643 CAATGGCTCATGTGTGGATCATAAAGCTGGTATGGATTATAT-GAAGTACGTTGAAGGTA 1701
Query 1556 ATGAGTCACAAAAGATAACCGATGGCATCTCGTCATTAAGCCTTCAAAGTACAGATCTAA 1615
||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||
Sbjct 1702 ATGAGACACAAAAGATAACCGATGACATCTCTTCAATAAGCCTTCAAAGTACAGATCGAA 1761
Query 1616 ATCAGAAGCATCAGGAATGTTTACACCATGAGATGGAATCTTTGTCAGTTGAACCAAACA 1675
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1762 ATCAGAAGCATCAGGAATGTGTACACGATGAGATGGAATCTTTGTCAGTTGAACCAAACG 1821
Query 1676 ACCTGTTACCCACAACACTTGCCAGGGAGAAGCTAGCTGAAAATGGAAACATGTCAACAT 1735
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1822 ACCTGTTACCTACAACACTTGCCAAGGAGAAGCTAGCTGAAAATGGAAACATGTCAACAT 1881
Query 1736 TGGATGTAACCCAGCATATGACAGGAT---CGTATCCTGGGTCACCCCCTCATTATCAGA 1792
||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1882 TGGATATAACCCAGCATATGACAGGATCAACATATCCTGGGTCACCCCCTCATTATCAGA 1941
Query 1793 AAGATGTCTTATATCGGCGTCATAACTTGGTGGAAGAAATCTTGCAGTTGTCTGCAGATT 1852
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1942 AAGATGTCTTATATCGACGTCATAATTTGGTGGAAGAAATCTTGCAGTTGTCTGCAGATT 2001
Query 1853 CTTATTCAGTGGCATCATCTGATAGCACAAGCAGCTGCAGTGAAGATGATAACTATGACT 1912
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2002 CTTATTCAGTGGCGTCATCTGATAGCACAAGCAGCTGCAGTGAAGATGATAATTATGATT 2061
Query 1913 CTGAATCTGAGTATTCAAATCATAAAGAGGGGCAGTTGACAGATCTTCTTAATGTGAATA 1972
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 2062 CTGAATCTGAGTATTCAAATCATAAAGAGGGGCGGTTGACTGATCTTCTTAATGTGAATA 2121
Query 1973 AACTTGGGAAGGAGATTCTTGAATGTGGACCAAAAGGAACAAGCTTTCTTGATT-TACAA 2031
||||||||||||||| || |||||| ||| ||||||||||| ||||||| || | |||
Sbjct 2122 GACTTGGGAAGGAGATCCTGGAATGTACACCGAAAGGAACAAGATTTCTTGGTTCT-CAA 2180
Query 2032 CGGGAGAATGGTAGCACAATAAAAACTTTGAGAACAGATGAATCAAGGAAGGAAAATACC 2091
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2181 CCGGAGAATGGTAGCACAATAAAAACTTTGAGAACAGATGAATCAATGAAGGAAACTACC 2240
Query 2092 GCTAACTTTCTTTCTGGATTGCATAATGGTGAACATGTTGTTAACCAGACAGACCGTTTG 2151
||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2241 ACTAACTTTCCTTCTGGATTGCATAATGGTAAACATGGTGTTAACCAGACAGACCGTTTG 2300
Query 2152 GTTGTGAAAAGGAAACCTATAAAACGATTTGTTTCCTTCCAGAAAGAGGAAAGTTGCATT 2211
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2301 GTTGAGAAAAGGAAACCTATAAAAAGATTTGTTTCCTTCCAGAAAGAGGAAAGTTGCATT 2360
Query 2212 ACCAATGGAGAGATATCTCTCAGGAGTGATGCAGATATCAGTGATTCTGGTGAAGATGAA 2271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361 ACCAATGGAGAGATATCTCTCAGGAGTGATGCAGATATCAGTGATTCTGGTGAAGATGTG 2420
Query 2272 TGTATTTCTGATAATTTTTGGGATAATTCCCTGTCAACGGTTTGTAGTAGTAGTAGTAAT 2331
||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct 2421 TGTATTTCTGATAATTTTTGGGAGAATACCCTGTCAAGGGTTTGTAGTAGTAGTAGTAAT 2480
Query 2332 AGGAGTATCAAATTTTTGGGGACTGATAGAACACTTGAAGAAAAAAGCGATTTAGTAGAG 2391
||||||||||||||||||||||||||||||||||||| || | | || || |
Sbjct 2481 AGGAGTATCAAATTTTTGGGGACTGATAGAACACTTG--GA-----G---T--AG-AG-G 2526
Query 2392 GAATATTTTTCAGCAAAACTGTCAGACTCCAGTTCTCAAGAAACTTGTAGGACGTACATG 2451
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2527 -AATATTTTTCAGCAAAACTGTCAGTTTCCAGCTCTCAAGAAACTTGTAGGACGTACATG 2585
Query 2452 AATTGTGATCTTATAGTACAGAAAGGTTCCACATACAAGCAAAGGGAAGCAGTGTTGCTG 2511
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2586 AATTGTGATCTTATACTACAGAAAGGTTCCACATACAAGCAACGGGAAGCAGTGTTGCTG 2645
Query 2512 CTGAGTAGCCAATACAAGCTGTACGTGCTACTCGTGGGTGTGGCTACTGATTATGAAGGG 2571
||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2646 CTGAGTAGCCAGGACAAGTTGTACGTGCTACTCGTGGGTGTGACTACTGATTATGAAGGG 2705
Query 2572 AGTACCTTAAGTGTACTATGTTCCCATGAAATCAAGGATTTACAAGATGTATCAGTTGGT 2631
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2706 AGTACCTTAAGTGTACTGTGTTCCCATGAAATCAAGGATTTACAAGACGTATCAGTTGGT 2765
Query 2632 CTAGGACTTCAGTTTGTGAGGCTACGCTTTTTGGAGGATGTAGAATACATTTTCGTAACC 2691
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2766 CTAGGACTTCAATTTGTGAGGCTACGCTTTTTGGAGGATGTAGAATACATTTTTGTAACC 2825
Query 2692 AAATGTATTGAGAAA-ACAACAGAATTACTCAATATCACACAAGTTTTCGATTCCCAGGC 2750
|| |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2826 AAGTGTATTAA-AAAGACAACAGAATTACTCAATATCACACAAGTTTTCGATTCCCAGGC 2884
Query 2751 TACAGAGTATAAATGTTATTTGCAAAGTCTGGAGAATATTCAGGTGGACTTGTTTGAGAA 2810
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2885 TACAGAGTATAAATGTTCTTTGCAAAGTCTGGAGAATATTCAGGTGGACTTGTTTGAGAA 2944
Query 2811 AGAAATATGTGGAGGTTTGAAGCTGAGTATATTCCAGTACAATGTTCTCCATTTTCAGAG 2870
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2945 AGAAATATGTGGAGGTTTGAAGCTAAGTATATTCCAGTACAATGTTCTCCATTTTCAGAG 3004
Query 2871 CACCACTCGTGGAGAAGTGTCATGGCTTTGGCGGTCGCTATTTGTGGCTGGTAGGCGTCT 2930
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3005 CACCACTCGTGGAGAAGTGTCATGGCTTTTGCGGTCGCTATTTGTGGCTGGTAGGCGTCT 3064
Query 2931 CTTCATATGCAATGAGGACTTCAAACAATTAAGTTCTCGAACAGCATATTCTTCTTCAGC 2990
||| ||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct 3065 CTTTATATGCAGTGAGGACTTCACACAACTAAGTTCTCGAACAGCATACTCTTCTTCAGC 3124
Query 2991 TCCATATTTCTTGCTTGACTCGTGCTGCTCCATTTCTGATATATCTGAGATGATCATTGA 3050
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 3125 TCCATATTTCTTGCTCGACTCGTGCTGCTCCATTTCTGAAATATCTGAAATGATCATTGA 3184
Query 3051 ATCGCAAGGAAGTGTTGTGTCATTAAAGATCAAAGAGAAGAGAACAGTGGATTTAGTTAC 3110
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3185 AACGCAAGGAATTGTTGTGTCATTAAAGATCAAAGAGAAGAGAACAGTGGATTTAGTTAC 3244
Query 3111 ATGGAAGCTCAAGTGGTGCAGCATAGAGAATGCTCTCAAGTTTGCGGCTTTGCTCAAAGC 3170
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 3245 ATGGAAGCTCAAGTGGTGCAGCATAGAGAATGCTATCAAGTTTGCGGCCTTGCTCAAAGC 3304
Query 3171 TCTTCACCCCAATTCGCCACAATGGCCATTGGCTGTAAGACACAGGAGATAAGTCTTCGT 3230
|||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 3305 TCTTCATCCCAATTCGCCACAATGGCCGTTGGCTGTAAGATACAGGAGATAAGTCTTCGT 3364
Query 3231 TTGCCtttttttttG 3245
|| |||||| |||||
Sbjct 3365 TTACCTTTTCTTTTG 3379
> AT3G17920.1 | Symbols: | Outer arm dynein light chain 1 protein
| chr3:6137255-6142023 FORWARD LENGTH=3033
Length=3033
Score = 1212 bits (656), Expect = 0.0
Identities = 1205/1466 (82%), Gaps = 53/1466 (4%)
Strand=Plus/Plus
Query 22 ATGGCAATTGTCACCGGAGATCGATATGTTGAGAAGCTAGAGAAGTT-TTTAGAAGACG- 79
||||| || || ||||||||||||||| | ||||| || ||| ||| || || || |
Sbjct 1 ATGGCCATCGTTACCGGAGATCGATATCTAGAGAATCTCCAGAGGTTCCTT-GACGA-GA 58
Query 80 AAGCTGAGTCT-CTTCTAGAAGAAACC-ATGATTCTCAAGCTTAATCCAGCTGGTCTTCA 137
||||||| | | ||| | || | ||| ||| | |||||||||||||| || ||||||||
Sbjct 59 AAGCTGA-TTTGCTTATTGATGGTACCGATG-TCCTCAAGCTTAATCCCGCGGGTCTTCA 116
Query 138 CTATCTTCATCTCCGTCTCGAGTCTCTCCGTGAACTTGAACGCATGCTCTCCGGTGCTCC 197
|||| |||||||||||||||| ||||| ||||||||||| | ||||||||||| |||||
Sbjct 117 CTATGTTCATCTCCGTCTCGAATCTCTTCGTGAACTTGAGCTTATGCTCTCCGGAGCTCC 176
Query 198 TGTTGATTACCTCCGCGCTTACGTTTCTGAC-TTAGGAGATTACCGCGCACTCGAGCAGC 256
||||| || ||||| || ||||| || ||| || || |||| ||| || || |||||||
Sbjct 177 CGTTGACTATCTCCGTGCCTACGTCTCCGACATT-GGCGATTTCCGTGCCCTTGAGCAGC 235
Query 257 TCCGTCGTATTCTCCGAATCC-TCACCTCACTTAAGGTCGTTTCCA-CGCTTCCTTCCCC 314
|||| ||||||||||| ||| || | || ||||||||||||| || |||||||||| ||
Sbjct 236 TCCGGCGTATTCTCCGTCTCCTTC-CTTCTCTTAAGGTCGTTT-CATCGCTTCCTTCACC 293
Query 315 GGCTCGTGATCCTACACCGCTCTCTCTTATTCCCTTTGGTAGGCTTAAGGTTTTGGAACT 374
||||||||||||||| |||||||||||| |||| ||| || ||||||||| ||||||||
Sbjct 294 GGCTCGTGATCCTACGCCGCTCTCTCTTCTTCCTTTTTCTAAGCTTAAGGTCTTGGAACT 353
Query 375 TCGTCGCTGTGATTTGTCCACTTCTCCGGCCAAAGGCTTGCTTGAGCTCCGTCACACTTT 434
||| ||||||||||||| |||||| | || || || ||||| || ||| | ||||||||
Sbjct 354 CCGTGGCTGTGATTTGTCTACTTCTTCTGCTAAGGGATTGCTAGAACTCAGGCACACTTT 413
Query 435 GGAAAATATCATCTGCCATAATTCCACTGATGC-TCTGCGGCATGTGTTCGCTAGTAGAA 493
||| || | ||||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct 414 GGAGAAGCTGATCTGCCATAATTCCACTGATGCGT-TGCGGCATGTGTTTGCTAGTAGAA 472
Query 494 TTGCTGAGATAACGAATTCGCCGGAATGGAATAAGTTGGCGGTCATATCTTGTGCTTGTA 553
| |||||||||| | |||| || | |||||||||||||| |||| |||||||||||||
Sbjct 473 TCGCTGAGATAAAGGATTCACCACAGTGGAATAAGTTGGCTTTCATTTCTTGTGCTTGTA 532
Query 554 ACCGTCTTGTGCTCATGGATGAGTCCTTGCAGCTTCTTCCAGCTGCTGAGTCGCTTGATC 613
||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct 533 ACCGTCTTGTGCTCATGGATGAGTCGTTGCAACTTCTTCCAGCTGTTGAGTCGCTTGATC 592
Query 614 TGAGTCGAAACAAGTTTGTGAAAG-TGGATAATCTTCGGAGATGCACCAAATTGAAGCAC 672
|||| ||||||||||||| |||| ||||||||||||||||||| | ||| ||||| |||
Sbjct 593 TGAGCCGAAACAAGTTTGC-AAAGGTGGATAATCTTCGGAGATGTAACAAGTTGAAACAC 651
Query 673 CTTGATCTCGGTTTCAATCATCTTAGAACAGTCTCTTACTTGAGTC-AGGTATCCTGTCA 731
|||||||| ||||||||||| || |||| | ||||| || |||| | |||||||||||||
Sbjct 652 CTTGATCTAGGTTTCAATCAACTAAGAAAAATCTCTCACCTGAG-CGAGGTATCCTGTCA 710
Query 732 TCTTGTGAAACTTGTTTTGAGGAACAACGCTCTAACTACGTTGCGTGGGATTGAGAACTT 791
||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct 711 CCTTGTTAAACTTGTTTTGAGGAATAACGCGCTAACTACATTGCGTGGGATTGAGAATTT 770
Query 792 GAAGTCACTTGAAGGCCTTGATGTTTCCTACAA-CATTATTTCCAACTTTTCAGAATTGG 850
|||||||||||||||||| |||||||||| ||| | |||||||| |||| || ||| |||
Sbjct 771 GAAGTCACTTGAAGGCCTGGATGTTTCCTTCAATC-TTATTTCCGACTTCTCGGAACTGG 829
Query 851 AGTTCCTTTGGAGTCTTTCAGTACT-GAAAGAATTGTGGCTGGAAGGAAACCCAGTGTGC 909
||||||| ||||||||||| | || || ||| | ||| |||||||||| ||| | ||
Sbjct 830 AGTTCCTCGGGAGTCTTTCATT-CTTGACAGACCTCTGGTTGGAAGGAAATCCAATTTGT 888
Query 910 TGTGCTCGATGGTACAGGGCGCATGTCTTCAGCTACATTG-CTCTTCCAGATGAACTGAA 968
|||||||||||||||||||| |||||| |||||||| || | |||||| |||| ||||
Sbjct 889 TGTGCTCGATGGTACAGGGCACATGTCCTCAGCTACGTTTAC-CTTCCAAATGATTTGAA 947
Query 969 GCTAGATGGCAAACAGATAGG-AACTAGAGAATTTTGGAAGAGGCAAATCATTGT-AGCC 1026
|| ||||||||||| || || || ||||||||||||||||||||| | |||| | ||
Sbjct 948 ACTTGATGGCAAACATATTGGGAA-TAGAGAATTTTGGAAGAGGCAGGTTGTTGTTA-CC 1005
Query 1027 CATAGGCAAAGTGAGCCTGCAAGCTACGGATTCTACTCTCCAGCTAGAGAGGAAGCTAAT 1086
| |||| ||||| ||||||| || ||||| ||||||||||| |||||||| |||||| ||
Sbjct 1006 CGTAGGAAAAGTCAGCCTGCCAGTTACGGGTTCTACTCTCCGGCTAGAGACGAAGCTGAT 1065
Query 1087 GAAGAAGGAAGCTGGAATAGaaaaaagaa-aaaGATCTGCCGTCTCGCTTCAATTGATAG 1145
|| |||||||||| | ||||||||||| ||| |||| ||| ||||| || ||||||||
Sbjct 1066 GACGAAGGAAGCTTTACTAGAAAAAAGACGAAA-ATCTACCGGCTCGCGTCTATTGATAG 1124
Query 1146 CGAAGCAGAGAGGACCTATGTGAATTCTGA-CTATGAGTCAGCTTCCTGTGATCACGAGA 1204
|| | |||||| ||||||||||||||||| | | ||||| ||||| ||||| | |||||
Sbjct 1125 TGAGGAAGAGAGCACCTATGTGAATTCTGATCAA-GAGTCTGCTTCATGTGAACCCGAGA 1183
Query 1205 ---A---CAAAGAG-A-A-TCTGAAGTGTGATCAAGAAGCTGATATATTTGGTCTTATAA 1255
| ||||||| | | | | |||| |||||| ||||||||| | |||||||| |||
Sbjct 1184 CTCAAAGCAAAGAGGAGAATATCAAGTCTGATCATGAAGCTGATGTCTTTGGTCTAATAT 1243
Query 1256 GTAAAGTTGAACACCTGAAGAAAGAACGTTCTGTTCTGTGG-TTGCGAGAGTTCAAGGAG 1314
||||||||||||| |||||||||| ||||||||||| ||| || || || || ||||||
Sbjct 1244 GTAAAGTTGAACAGTTGAAGAAAGAGCGTTCTGTTCTTTGGCTT-CGGGAATTTAAGGAG 1302
Query 1315 TGGATGGATCATTCAACAGAGGATTTTGCAGATGTCAGTAAAGACGGCCAGG-GTA-TCA 1372
||||| |||||| || | |||||||||| |||||||| ||| | || || ||| | |
Sbjct 1303 TGGATAGATCATCCATCCGAGGATTTTGTGGATGTCAGCAAAAATGGG-AGCAGTACTGA 1361
Query 1373 ATTTGGAAAAGAAGTACTATACAAAGATTAGAGAAAT--CTCGAGGCATCATGGTGGAAC 1430
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Sbjct 1362 -TTCAGAGCAGAAGTACTACATGAAGAATAGA-AA-TGGCCCAAAACATCATGGTGAAAC 1418
Query 1431 ACCGAGATATGCTTCAGGGTCTTTAC 1456
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Sbjct 1419 AATGAGATATACACCAGGGCCTCTAC 1444
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 161437222574
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5