BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923350 Length=316 Score E Sequences producing significant alignments: (Bits) Value AT1G28320.1 | Symbols: DEG15 | protease-related | chr1:9920507-... 169 2e-41 > AT1G28320.1 | Symbols: DEG15 | protease-related | chr1:9920507-9924488 REVERSE LENGTH=2437 Length=2437 Score = 169 bits (91), Expect = 2e-41 Identities = 107/115 (93%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 200 TATGCAGAACATAAAGATCTTTCAAACACTTGATCAACGAAGCCAAGAACTCTCATCCAT 259 ||||||||||| || |||| |||||||||||||||||| ||| |||||||||||||||| Sbjct 2025 TATGCAGAACACAACGATCCTTCAAACACTTGATCAACCTAGCGAAGAACTCTCATCCAT 2084 Query 260 TTGGGCTTTGATGCCATCACTATCACCAAAGACTTAACAGTCTCTACCCAATCTG 314 |||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 2085 TTGGGCTTTGATGCCATCACTATCACCAAAGACTGAGCAGTCTCTACCCAATCTG 2139 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14678182708 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5