BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg923368

Length=250
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G36305.1 | Symbols: RCE1, ATFACE-2, ATFACE2, FACE2 | farnesy...   134    5e-31


> AT2G36305.1 | Symbols: RCE1, ATFACE-2, ATFACE2, FACE2 | farnesylated 
protein-converting enzyme 2 | chr2:15214519-15216612 
FORWARD LENGTH=1187
Length=1187

 Score =  134 bits (72),  Expect = 5e-31
 Identities = 84/90 (93%), Gaps = 0/90 (0%)
 Strand=Plus/Plus

Query  92   GGCACCAGTAACTGAGGAGCTGGTTTTCCCAGCTTGTATGATACCTTTGCTTCTGTGTGC  151
            ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct  565  GGCACCAGTAACTGAGGAGCTGGTTTTCCGATCATGTATGATACCTTTGCTTCTGTGTGC  624

Query  152  TGGATTTAGGATTTACAGTGCCATCTTTCT  181
            ||| ||||||||| ||| ||||||||||||
Sbjct  625  TGGGTTTAGGATTAACACTGCCATCTTTCT  654



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11360511274


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5