BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923423
Length=2023
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49890.1 | Symbols: QWRF2 | Family of unknown function (DUF5... 3323 0.0
AT3G19570.2 | Symbols: SCO3, QWRF1 | Family of unknown function... 1517 0.0
> AT1G49890.1 | Symbols: QWRF2 | Family of unknown function (DUF566)
| chr1:18470075-18473823 FORWARD LENGTH=2547
Length=2547
Score = 3323 bits (1799), Expect = 0.0
Identities = 1956/2029 (96%), Gaps = 21/2029 (1%)
Strand=Plus/Plus
Query 4 AGTTTTTCCCGACGAGAATGGTGGCTGCAGCGATTTCAACCACTGACCCAAGAAACCCAC 63
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 191 AGTTTTTTCCGACGAGAATGGTTGCTGCAGCGATTTCAACCACTGACCCAAGAAACCCAC 250
Query 64 CTCGAGATCGACAAGATAAACCTCAATC-CTTAACCAACAATGGCGGACAAAGAAGACCC 122
|||||||| | | ||||||||| ||| |||||||||||||||||||||||||||
Sbjct 251 CTCGAGAT---C--G----ACCTCAATCTCTT-ACCAACAATGGCGGACAAAGAAGACCC 300
Query 123 AGAGGCAAACAAGTTCCTTCTCGCTACTTATCTCCTTCTCCTTCTCACTCTGTCTCTT-- 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 301 AGAGGCAAACAAGTTCCTTCTCGCTACTTATCTCCTTCTCCGTCTCACTCTGTCTCTTCC 360
Query 181 -CCA--AC-ACCACTACCACTACCACCACTACCACGTCTTCTTCCTCCTCTTCTTCTTCC 236
||| || |||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 361 ACCACCACTACCACTACCACTACTACCACCACCACCTCTTCTTCCTCCTCTTCTTCTTCC 420
Query 237 TCTGCAATACTCAGAACTAGTAAACGATACCCATCTCCTTCGCCTTTACTCTCTCGCTCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TCTGCAATACTCAGAACTAGTAAACGATACCCATCTCCTTCGCCTTTACTCTCTCGCTCC 480
Query 297 ACGACGAATTCCGCTTCTAATTCCATCAAAACGCCTTCTTTGTTACCTAAACGGTCCCAA 356
||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 481 ACGACGAATTCCGCTTCCAATTCGATCAAAACGCCGTCTTTGTTACCTAAACGGTCTCAA 540
Query 357 TCAGTGGACCGTCGTCGACCCTCGGCGGTTCCGGTCACTGTAGGCAGTGAAATGTCGGCG 416
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 541 TCAGTGGACCGTCGTCGACCCTCGGCGGTTTCGGTCACTGTAGGCACTGAAATGTCGGCG 600
Query 417 GCTACGAAGATGCTTATCACTTCCACTAGGAGTTTGTCTGTTTCGTTTCAAGGTGAAGCC 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GCTACGAAGATGCTTATCACTTCCACTAGGAGTTTGTCTGTTTCGTTTCAAGGTGAAGCC 660
Query 477 TTTTCTCTTCCGATTAGTAAAAAGAAAGAGGCTACTACTACGCCGGTTTCTCACCGGAAA 536
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 661 TTTTCTCTTCCGATTAGTAAAAAGAAAGAGACTACTTCTACGCCGGTTTCTCACCGGAAA 720
Query 537 TCTACTCCGGAGCGACGGAGATCGACGCCGGTTCGAGATCAGAGAGAGAACTCTAAGCCT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TCTACTCCGGAGCGACGGAGATCGACGCCGGTTCGAGATCAGAGAGAGAACTCTAAGCCT 780
Query 597 GTGGATCAGCAACGGTGGCCTGGAGCTTCACGGAGGGGGAATTCCGAATCTGTTGTGCCG 656
||||| || ||||| ||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 781 GTGGACCAACAACGCTGGCCTGGAGCCTCACGGAGGGGGAATTCTGAATCTGTTGTGCCG 840
Query 657 AATTCGCTTTCTAGAAGCTTAGATTGTGGTAGTGATAGAGGAAAGCTTGGATCTGGGTTT 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 AATTCGCTTTCTAGAAGCTTAGATTGTGGTAGTGATAGAGGAAAGCTTGGATCTGGGTTT 900
Query 717 GTTGGGAGGTCAATGTTGCATAATTCTATGATTGATGAGAGTCCTAGGGTTTCTGTTAAT 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GTTGGGAGGTCAATGTTGCATAATTCTATGATTGATGAGAGTCCTAGGGTTTCTGTTAAT 960
Query 777 GGGAGATTGAGTTTAGATTTGGGAGGTAGGGATGAATATTTGGAAATTGGAGATGAGAGC 836
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
Sbjct 961 GGGAGATTGAGTTTAGATTTGGGAGGTAGGGATGAATATTTGGATATTGGAGATGATATC 1020
Query 837 CAGAGAAGACCAAATAATGGTTTGACGTCTAGTGTTTCCTGTGA-TTTCACTGCTTCTGA 895
||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 1021 CAGAGAAGACCAAATAATGGTCTGACGTCTAGTGTTTCCTGTGACTTT-ACTGCTTCTGA 1079
Query 896 TACTGATAGTGTTTCTTCTGGTAGCACTAGTGGTGTTCAGGAATGTGGCTCTGGTGTTAA 955
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1080 TACTGATAGTGTTTCTTCTGGTAGCACTAATGGTGTTCAAGAATGTGGCTCTGGTGTTAA 1139
Query 956 TGGGGAAATCTCTAAATCAAAGAGCTTGCCTCGTAATATTATGGCTTCTGCTAGGTTTTG 1015
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1140 TGGTGAAATCTCTAAATCAAAGAGCTTGCCTCGTAATATTATGGCTTCTGCTAGGTTCTG 1199
Query 1016 GCAAGAGACTAATAGCCGGTTAAGGCGGTTGCAGGATCCAGGTTCGCCTTTATCCTCTAG 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 GCAAGAGACTAATAGCCGGTTAAGGCGGTTGCAGGATCCAGGTTCGCCTTTATCCTCTAG 1259
Query 1076 CCCGGGTTTGAAAACCAGTAGTGTATCTTCAAAGTTTGGTCTTTCGAAACGGTTTTCTAG 1135
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1260 CCCGGGTTTGAAAACCAGTAGTATATCTTCAAAGTTTGGTCTTTCGAAACGGTTTTCTAG 1319
Query 1136 CGATGCTGTTCCTTTATCATCTCCTCGTGGTATGGCTTCTCCTGTAAGAGGTTCTGCTAT 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 CGATGCTGTTCCTTTATCATCTCCTCGTGGTATGGCTTCTCCTGTAAGAGGTTCTGCTAT 1379
Query 1196 TCGCTCTGCTTCACCAAGTAAGCTTTGGGCGACAACTACCTCATCTCCAGCTAGAGCGCT 1255
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1380 ACGCTCTGCTTCACCAAGTAAGCTTTGGGCGACAACTACGTCATCTCCAGCTAGAGCTCT 1439
Query 1256 TTCGAGTCCTTCTCGAG-TGAGAAATGGAGTTTCTGATCAAATGAACGCTTATAACCGCA 1314
|||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TTCGAGCCCTTCTCGAGCT-AGAAATGGAGTTTCTGATCAAATGAACGCTTATAACCGCA 1498
Query 1315 ACAATACGCCTTCAATTCTTAGTTTCTCTGCTGATATTAGGAGAGGTAAAATTGGGGAGG 1374
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1499 ACAACACGCCTTCAATTCTTAGTTTCTCTGCTGATATTAGGAGAGGGAAAATTGGGGAGG 1558
Query 1375 ATCGTGTTATGGATGCACATTTGTTGAGGCTTCTATATAACCGTTACCTGCAGTGGCGTT 1434
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1559 ATCGTGTTATGGATGCACATTTGTTGAGGCTTCTATATAACCGTGACCTGCAGTGGCGGT 1618
Query 1435 TTGTCAATGCGAGGGCAGATTCTACTGTTATGGTGCAAAGATTGAACGCAGAGAAAAACC 1494
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1619 TTGTCAATGCGAGGGCAGACTCTACTGTTATGGTGCAAAGGTTGAACGCAGAGAAAAACC 1678
Query 1495 TGTGGAATGCATGGGTATCAATCTCGGAATTGCGGCACAGTGTCACTTTAAAACGAATCA 1554
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1679 TGTGGAATGCATGGGTATCAATCTCGGAACTGCGGCACAGTGTCACTTTAAAACGAATCA 1738
Query 1555 AGTTGCTTTTGCTAAGGCAGAAATTGAAACTGGCTTCTATTTTGAGGGGACAGATGGGTT 1614
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1739 AGTTGCTTTTGCTAAGGCAGAAATTGAAACTGGCTTCTATTCTGAGGGGACAGATGGGTT 1798
Query 1615 TTCTAGAAGAATGGTCTCTTCTGGATAGAGATCATTCAAGTTCTCTGTCTGGAGCAACCG 1674
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1799 TTCTAGAAGAATGGTCTCTTCTGGATAGAGATCATTCAAGTTCTTTGTCAGGAGCAACCG 1858
Query 1675 AATCCTTGAAAGCCAGTACGCTTCGTCTACCAATAGTTGGAAAAACCGTGGTTGATATCC 1734
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1859 AATCCTTGAAAGCCAGCACACTTCGTCTACCAATAGTTGGAAAAACCGTGGTTGATATTC 1918
Query 1735 AAGACCTCAAGCATGCTGTTAGTTCAGCCGTCGATGTAATGCAAGCTATGTCATCTTCCA 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 AAGACCTCAAGCATGCTGTTAGTTCAGCCGTCGATGTAATGCAAGCTATGTCATCTTCCA 1978
Query 1795 TATTCTCACTGACGTTGAAGGTGGATGAGATGAATTCTGTAATGGTCGAAACCGTGAATG 1854
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1979 TATTCTCACTGACGTCGAAGGTGGATGAGATGAATTCTGTAATGGTGGAAACCGTGAATG 2038
Query 1855 TAACTGCTAAGGAAAAGGTTTTGCTTGAAAGATGTCAAGGTTGCTTATCAAGCGTAGCAG 1914
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2039 TAACTGCTAAAGAAAAGGTTTTGCTTGAAAGATGTCAAGGTTGCTTATCAAGAGTAGCAG 2098
Query 1915 CTATGCAGGTTACTGATTGTAGCATGAAAACGCATATAATACAACTAAGTCGGATACCAA 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2099 CTATGCAGGTTACTGATTGTAGCATGAAAACGCATATAATACAACTAAGTCGGATACCAA 2158
Query 1975 TCACAAGCAGCTTGACTTCACAACTGTAGAAAAACTGATCTTCCTCAAG 2023
||||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct 2159 TCACAAGCAGCTTGACTCCGCAATTGTAGAAAAACTGATCTTCCTCAAG 2207
> AT3G19570.2 | Symbols: SCO3, QWRF1 | Family of unknown function
(DUF566) | chr3:6797485-6801740 FORWARD LENGTH=2624
Length=2624
Score = 1517 bits (821), Expect = 0.0
Identities = 1651/2034 (81%), Gaps = 128/2034 (6%)
Strand=Plus/Plus
Query 30 GCAGCGATTT-CAACCACTGAC-CCAAGAA-AC-CCACCTCGAGATCGACAAGATAAACC 85
||||| |||| ||| ||| ||| | ||||| | |||||||||||||| ||||| |||||
Sbjct 318 GCAGCAATTTCCAA-CACCGACTCTAAGAATCCTCCACCTCGAGATCGGCAAGACAAACC 376
Query 86 TCAATCCTTA-A-CCAACAATGGCGGAC-A-AA-GAAGACCCAGAG--GC-AAACAA-GT 136
|| | || | | | ||||||||||||| | || ||||||| |||| || ||| || ||
Sbjct 377 TC-A-GCTCACAGCTAACAATGGCGGACTACAACGAAGACCTAGAGCTGCTAAA-AATGT 433
Query 137 TCCTTCTCGCTACTTATCTCCTTCTCCTTCTCACTCTGTCTCTTCCAACACCACTACCAC 196
|| || ||||||||||| |||||||| | ||| | || | ||| || || ||
Sbjct 434 CCCCTCACGCTACTTATCCCCTTCTCC-T-TCA------C-ATT-C--CACGACGACGAC 481
Query 197 TACCACCACTACCACGTCTTCTTCCTCCTCTTCTTCTTCCTCTGCAATACTCAGAACTAG 256
|| |||||| | || ||| |||| | || |||||||| |||| ||||| || ||||
Sbjct 482 GACGACCACTGCTACATCTACTTCGACTTCGTCTTCTTCGTCTGTGATACTGAGGTCTAG 541
Query 257 TAAACGATACCCATCTCCTTCGCCTTTACTCTCTCGCTCCACGACGAATTCCGCTTCTAA 316
||| |||| | |||||| ||||| |||||||| |||||||||||| ||||||||
Sbjct 542 TAAGCGAT----A--TCCTTCCCCTTTGCTCTCTCG---CACGACGAATTCTGCTTCTAA 592
Query 317 TTCCATCAAAACGCCTTCTTTGTTACCTAAACGGTCCCAATCAGTGGACCGTCGTCGACC 376
|| | | |||||||| | ||||||||||||||| ||||| |||||||||||||| ||
Sbjct 593 TTTGGTTTATACGCCTTCCTCGTTACCTAAACGGTCTCAATCGGTGGACCGTCGTCGTCC 652
Query 377 CTCGGCGGTTCCGGTCA-CTGTAGGCAGTGAAATGTCGGCGGCTACGAAGATGCTTATCA 435
||||| ||| | | || | | | | | |||||||||||||| ||||||||||||||||
Sbjct 653 GTCGGCAGTTTCTGACACCCG-A-AC-G-GAAATGTCGGCGGCGACGAAGATGCTTATCA 708
Query 436 CTTCCACTAGGAGTTTGTCTGTTTCGTTTCAAGGTGAAGCCTTTTC-TCTTCCGATTAGT 494
|||| || |||||||| |||||||| |||||||| || || ||||| | |||||||||||
Sbjct 709 CTTCTACGAGGAGTTTATCTGTTTCCTTTCAAGGAGAGGCGTTTTCGT-TTCCGATTAGT 767
Query 495 AAAAAGAAAGAGGCTACTACTACGCCGGTTTCTCACCGGAAATCTACTCCGGAGCGACGG 554
|| ||||| || | ||| | |||||||||||||||||||||| |||||||||||| |||
Sbjct 768 AAGAAGAAGGA-G--ACTGCCACGCCGGTTTCTCACCGGAAATGTACTCCGGAGCGGCGG 824
Query 555 AGATCGACGCCGGTTCGAGATCAGAGAGAGAACTCTAAGCCTGTGGATCAGCAACGGTGG 614
||| |||| || |||||||||||| | ||||| || ||||| ||||||||||||| ||||
Sbjct 825 AGAGCGACACCTGTTCGAGATCAGCGGGAGAATTCAAAGCCGGTGGATCAGCAACTGTGG 884
Query 615 CCTGGAGCTTCACGGAGGGGGAA-TTCCGAATCTGTTGTGCCGAATTCGCTTTCTAGAAG 673
||||| ||||| |||| |||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 885 CCTGGTGCTTCTCGGA-GGGGAAGTTCTGAATCTGTTGTGCCGAATTCGCTTTCTAGAAG 943
Query 674 CTTAGATTGTGGTAGTGATAGA--GGA--AAGCTTGGATCTGGGTTTGTTGGG-AGGTCA 728
| | |||| || |||||| || ||| |||||||||||||| |||| |||| ||||||
Sbjct 944 CGTGGATTCTGACAGTGAT-GATGGGAGGAAGCTTGGATCTGGCTTTG-TGGGAAGGTCA 1001
Query 729 ATGTTGCATAATTCTATGATTGATGAGAGTCCTAGGGTTTCTGTTAATGGGAGATTGAGT 788
||||||| | | || | | ||||| |||||||||||| | |||||||||||| |
Sbjct 1002 ATGTTGC---A-GC-AT--TCG--CAGAGTTCTAGGGTTTCTGGTGATGGGAGATTGAAT 1052
Query 789 TTAGATTTGGGAGGTAGG-GAT-GAATATTTGGAAATTG-GAGATGAGAGCCAGAG-AAG 844
|||| ||| | ||| ||| ||| |||| ||||||| || ||||||||| | || | |||
Sbjct 1053 TTAGGTTTTGTAGG-AGGTGATGGAAT-GTTGGAAA-TGAGAGATGAGAACAAG-GCAAG 1108
Query 845 ACCAA--ATA-AT---GGTTTGACGTCTAGTGTTTCCTGTGA-TTTCACTGCTTCTGATA 897
|| || | | || | ||| | ||||| ||||| ||||| ||| ||||| |||||||
Sbjct 1109 ACAAAGCACACATCCAAGATTGGCTTCTAGCGTTTCGTGTGACTTT-ACTGCATCTGATA 1167
Query 898 CTGATAGTGTTTCTTCTGGTAGCACTAGTGGTGTTCAGGAATGTGGCTCTGGTGTTAATG 957
||||||||||||| |||||||| |||| ||||| || |||||||| ||||||| |
Sbjct 1168 CTGATAGTGTTTCATCTGGTAGTACTAATGGTGCGCATGAATGTGGTTCTGGTG---A-- 1222
Query 958 GGGAAATCTCTAAATCAAAGAGCTTGCCTCGTAATATTATGGCTTCTGCTAGGTTTTGGC 1017
|| | |||||| ||| ||||||||| |||||| |||||||||| ||| || ||||
Sbjct 1223 -GG---TTTCTAAAACAAGGAGCTTGCCGCGTAATGGTATGGCTTCTACTAAATTCTGGC 1278
Query 1018 AAGAGACTAATAGCCGGTTAAGGCGGTTGCAGGATCCAGGTTCGCCTTTATCCTCTAGCC 1077
|||||||||||||| ||||||||||| |||||||||| || || ||| || |||||||
Sbjct 1279 AAGAGACTAATAGCAGGTTAAGGCGGATGCAGGATCCTGGCTCACCTCAATGTTCTAGCC 1338
Query 1078 CGGGTTTGAAAACCAGTAGTGTATCTTCAAAGTTTGGTCTTTCGAAACGGTTTTCTAGCG 1137
| ||| || || ||||||| | || |||||||| ||| ||||||||||| ||||| |
Sbjct 1339 CAAGTTCGAGAATCAGTAGTATCTCATCAAAGTTCAGTCAATCGAAACGGTTCTCTAGTG 1398
Query 1138 ATGCTGTTCC-TT--TATCATCTCCTCGTGGTATGGCTTCTCCTGTAAGAGGTTCTGCTA 1194
|| | ||| || ||||||||||||||||||| ||||||| |||| || |||||
Sbjct 1399 AT--AG-TCCGTTGACATCATCTCCTCGTGGTATGACTTCTCCAATAAG-GG--GTGCTA 1452
Query 1195 TTCGCTCTGCTTCACCAAGTAAGCTTTGGGCGACAACTACCTCATCTCCAGCTA-GAGCG 1253
|||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||| || |
Sbjct 1453 CTCGCCCTGCTTCACCAAGTAAGCTTTGGGCAACAGCTACATCAGCTCCAGCTAGGA-C- 1510
Query 1254 CT-TTCGAGTCCTTCTCGAGTGAGAAATGGAGTTTCTGATCAAATGAACGCTTATAACCG 1312
| || |||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1511 ATCATCTAGTCCTTCTCGAGTGAGAAATGGAGTTTCTGAACAAATGAATGCTTATAACCG 1570
Query 1313 CAACAATACGCCTTCAATTCTTAGTTTCTCTGCTGATATTAGGAGAGGTAAAATTGGGGA 1372
| || | ||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1571 C-AC-CT-TGCCTTCAATTCTTTGTTTCTCTGCTGATATTAGGAGGGGTAAAATTGGGGA 1627
Query 1373 GGATCGTGTTATGGATGCACATTTGTTGAGGCTTCTATATAACCGTTACCTGCAGTGGCG 1432
|||||||||||||||||| || |||||||||||||| ||||||||| | |||||||||||
Sbjct 1628 GGATCGTGTTATGGATGCCCACTTGTTGAGGCTTCTGTATAACCGTGATCTGCAGTGGCG 1687
Query 1433 TTTTGTCAATGCGAGGGCAGATTCTACTGTTATGGTGCAAAGATTGAACGCAGAGAAAAA 1492
|||| ||||||||||||||| || ||| | ||||| |||||| ||| ||||||||||
Sbjct 1688 GTTTGCCAATGCGAGGGCAGACTCCACTCTCATGGTACAAAGACTGAGTGCAGAGAAAAT 1747
Query 1493 CCTGTGGAATGCATGGGTATCAATCTCGGAATTGCGGCACAGTGTCACTTTAAAACGAAT 1552
|||||||||||||||||||||||||||||||||||| || ||||||| | ||||| ||
Sbjct 1748 CCTGTGGAATGCATGGGTATCAATCTCGGAATTGCGCCATTCTGTCACTCTGAAACGGAT 1807
Query 1553 CAAGTTGCTTTTGCTAAGGCAGAAATTGAAACTGGCTTCTATTTTGAGGG-GACAGATGG 1611
||||||||| ||| | ||||||||| ||||||| ||||| || |||| || | ||||||
Sbjct 1808 CAAGTTGCTCTTGATGAGGCAGAAACTGAAACTAGCTTCCATCTTGAAGGAG-CAGATGT 1866
Query 1612 GTTTTCTAGAAGAATGGTCTCTTCTGGATAGAGATCATTCAAGTTCTCTGTCTGGAGCAA 1671
||| ||||||||||||||||||| |||| ||| |||| |||| |||| |||| |||||||
Sbjct 1867 GTTATCTAGAAGAATGGTCTCTTTTGGACAGAAATCACTCAAATTCTTTGTCAGGAGCAA 1926
Query 1672 CCGAATCCTTGAAAGCCAGTACGCTTCGTCTACCAAT-AGTTGGAAAAACCGTGGTTGAT 1730
| ||| ||||||||||||| || |||||||| ||| | ||| || ||| |||||||||||
Sbjct 1927 CTGAAGCCTTGAAAGCCAGCACACTTCGTCTTCCAGTTAGT-GGTAAAGCCGTGGTTGAT 1985
Query 1731 ATCCAAGACCTCAAGCATGCTGTTAGTTCAGCCGTCGATGTAATGCAAGCTATG-TCATC 1789
|| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||| | ||
Sbjct 1986 ATTCAAGATCTCAAGCATGCTGTTAGTTCAGCGGTTGATGTCATGCACGCTATGGTG-TC 2044
Query 1790 TTCCATATTCTCACTGACGTTGAAGGTGGATGAGATGAATTCTGTAATGGTC-GAAACCG 1848
||| ||||||||||| || | ||||||||| || |||||||| ||||||| | |||| |
Sbjct 2045 TTCAATATTCTCACTTACATCGAAGGTGGAGGAAATGAATTCAGTAATGG-CAGAAATGG 2103
Query 1849 TGAATGTAACTGCTAAGGAAAAGGTTTTGCTTGAA-AGATGTCAAGG-TTGCTTATCAAG 1906
||||| | |||| || ||| |||||||||| ||| || |||||||| || |||| ||||
Sbjct 2104 TGAATATCACTGGAAAAGAAGAGGTTTTGCTCGAACAG-TGTCAAGGATT-CTTAACAAG 2161
Query 1907 CGTAGCAGCTATGCAGGTTACTGATTGTAGCATGAAAACGCATATAATACAACTAAGTCG 1966
|||||||| ||||||||||| || || |||||||| ||||| ||||||||||| || ||
Sbjct 2162 AGTAGCAGCAATGCAGGTTACGGACTGCAGCATGAAGACGCACATAATACAACTTAGCCG 2221
Query 1967 GATACCAATCACAAGCAGCTTGACTTCACAACTGTAGAAAAACTGATCTTCCTC 2020
| || || | ||| | || ||||||||||||||||||| ||||||| ||||
Sbjct 2222 GCTATAAA-C-CAA-C--CT-GACTTCACAACTGTAGAAA--CTGATCT-CCTC 2266
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100250488365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5