BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923514 Length=290 Score E Sequences producing significant alignments: (Bits) Value AT1G16310.1 | Symbols: | Cation efflux family protein | chr1:5... 353 4e-97 > AT1G16310.1 | Symbols: | Cation efflux family protein | chr1:5578431-5580693 FORWARD LENGTH=1399 Length=1399 Score = 353 bits (191), Expect = 4e-97 Identities = 262/295 (89%), Gaps = 10/295 (3%) Strand=Plus/Plus Query 1 CTCCTCGAAGGTTTCGATGAGATGGAGACTATCCATGAAACTGGTTTGGCATCTGGTGTT 60 |||||||| |||||| ||||||||||||||||||| |||| |||||| |||||||||||| Sbjct 323 CTCCTCGAGGGTTTCAATGAGATGGAGACTATCCACGAAAATGGTTTTGCATCTGGTGTT 382 Query 61 CCAACTGAGAAAGAAATGAACAAGCTTGCAATGAGTGAGAGA-TTGGCAGTTCACATACT 119 ||||||||| |||||||||| |||||||||| |||||||||| || || ||||||||| | Sbjct 383 CCAACTGAGGAAGAAATGAAGAAGCTTGCAAAGAGTGAGAGACTT-GCGGTTCACATA-T 440 Query 120 -AAACACAACAAATTTGGTGCTTTTTGT-GTCAAAAGTTTATGCCTCTATGGAGAGTAGA 177 ||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 441 CGAACGCAACAAATTTGGTGCTTTTTGTAG-CAAAAGTTTATGCCTCTATGGAGAGTAGA 499 Query 178 TCCATGGTTGTGATTGCTTCAACTTTAGG-CTCTCTCTTAGATCACTTGTCTGGTTTTAT 236 ||||||| |||||||||||||||||| || |||||| || |||| ||||||||||||||| Sbjct 500 TCCATGGCTGTGATTGCTTCAACTTT-GGACTCTCTTTTGGATCTCTTGTCTGGTTTTAT 558 Query 237 TCTTTGGTTTACGGCTAATACCATGAGATA-CTAATC-AGTTTCACTATCCAATC 289 || |||||||| |||||| |||||||| | | || | ||||||||||||| ||| Sbjct 559 CCTCTGGTTTACAGCTAATGCCATGAGAAAACCAAACCAGTTTCACTATCCTATC 613 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13371221234 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5