BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923563 Length=1564 Score E Sequences producing significant alignments: (Bits) Value AT1G50990.1 | Symbols: | Protein kinase protein with tetratric... 2521 0.0 > AT1G50990.1 | Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr1:18902930-18905204 FORWARD LENGTH=1524 Length=1524 Score = 2521 bits (1365), Expect = 0.0 Identities = 1473/1526 (97%), Gaps = 4/1526 (0%) Strand=Plus/Plus Query 21 ATGGGTTGTTGTCAATCGTCATTCTTGAAACCGTCGTCATTGCATGACAAGAAAATCCCC 80 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGGGTTGTTGTCAATCGTCATTCTTGAAACCGTCGTCATTGCATGACAAGAAAATCACC 60 Query 81 TCCGACGATATT-TCCGGCCGCCGTGGAAAAGGAGCCAAACGCGGTAATCGCCACCGTCA 139 ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 61 TCCGACGAT-TTATCCGGCCGCCGTGGAAAAGGAGCCAAACGTGGTAATCGCCACCGTCA 119 Query 140 TCCTAACGTTAATGAAGGCAGGGGATGGCTTTTTTCCGCCGTGCCGGACTTCTCCGAGTT 199 | ||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||| Sbjct 120 TGCTAACATTAATGAAGGCAGGGGATGGCATTTTTCCGACGTGCCAGACTTCTCCGAGTT 179 Query 200 CTCGGCATCGGTTCTTCGTGACGCTACGAACAATTTCAACAAAAACGCTGTCGTATCGGT 259 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || Sbjct 180 CTCGGCATCGGTTCTTCGTGACGCTACAAATAATTTCAACAAAAACGCTGTCGTATCAGT 239 Query 260 TTGTTCTGATCAAGAACCAAACGTTGTTTATCAAGGCTGCATTAAGAGTGACAAAGATAA 319 |||||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||| Sbjct 240 TTGTTCTGATCAAGAACCAAACCTTGTTTACCAAGGCTGCATTAGGAGCGACAAAGATAA 299 Query 320 ACGTCTTATCGCCGTTAAAAAATTCTCCAAAACAACATGGCCTGATCCTAAACAATTCGC 379 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 ACGTCTTATTGCCGTTAAAAAATTCTCCAAAACAACATGGCCTGATCCTAAACAATTCGC 359 Query 380 TGCAGAAGCGCGGGCTATCGGGAATTTGAGGCACGTAAGACTGGTGAATTTGATAGGTTA 439 | ||||||| ||||||||||| | ||||||||| |||||||| ||||||||||||||||| Sbjct 360 TACAGAAGCTCGGGCTATCGGCAGTTTGAGGCATGTAAGACTAGTGAATTTGATAGGTTA 419 Query 440 TTGTTGTGATGGAGATGAAAGGTTGCTTGTATCGGAGTACATGCCTAATCAAAGCCTAAC 499 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 420 TTGTTGTGAAGGAGATGAAAGGTTGCTTGTATCGGAGTACATGCCTAATGAAAGCCTAAC 479 Query 500 CAAACATCTATTTCATTGGGAGAAACAAACCATGGAGTGGGCTATGCGATTGAGAGTTGC 559 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 480 CAAACATCTATTTCATTGGGAGAAACAAACCATGGAATGGGCTATGCGATTGAGAGTTGC 539 Query 560 ACTTTATGTAGCTGAAGCTTTAGAATATTGTAGACAGAGTGGACTCAAATTGTACCATGA 619 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 540 ACTTTATGTAGCTGAAGCTTTAGAATATTGTAGGCAGAGTGGACTCAAATTGTACCATGA 599 Query 620 TCTCAATACTTGTAGGGTTCTCTTTGATGAGAATGGAAGTCCTCGGCTTTCATGTTTTGG 679 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 TCTCAATACTTGTCGGGTTCTCTTTGATGAGAATGGAAGTCCTCGGCTTTCATGTTTTGG 659 Query 680 ATGGATGAAAAATAGCAAAGATGGCAAAAACTTCAGCACAAATCTTGCTTATACACCGCC 739 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 660 ATGGATGAAAAATAGCAAAGATGGCAAGAACTTCAGCACAAATCTTGCTTATACACCGCC 719 Query 740 CGAATATCTTAGAAGTGGTACGTTAATTCCAGAGAGTGTTGTCTTCAGCTTTGGGACGTT 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 CGAATATCTTAGAAGTGGTACGTTAATTCCAGAGAGTGTTGTCTTCAGCTTTGGGACGTT 779 Query 800 TCTTTTGGATCTTCTTAGTGGGAAACACATTCCTCCAAGTCATGCGGTCGATACAATTCA 859 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 780 TCTTTTGGATCTTCTTAGTGGGAAACACATTCCTCCAAGTCATGCGGTTGGTACAATTCA 839 Query 860 AAAGCAAAACTTAATTGTCTTGATGGATTCACATTTAGAAGGAAACTATCCTGAGGAAGA 919 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 AAAGCAAAACTTAAATGTCTTGATGGATTCACATTTAGAAGGAAACTATCCTGAGGAAGA 899 Query 920 CGCAGCCATGGTGTTTGATTTGGCTTCCAAATGCCTTCACAATAACCCTAATGAACGGCC 979 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 CGCAGCCATGGTGTTTGATTTGGCTTCCAAATGCCTTCACAATAACCCTAATGAACGGCC 959 Query 980 AGAAATTAGAGATATTATCTCAGTTATCGCTACACTTCAACAAAAACTAGATGTTCCGTC 1039 ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 960 AGAAATTGGAGATATCATCTCAGTTATCACTACACTTCAACAAAAACTAGATGTTCCGTC 1019 Query 1040 CTATACTATGCTTGGCATTTCAAAACTTGAAAAGCTTGAAATGGAACGCCCGAAATCTTT 1099 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1020 CTATACTATGCTTGGAATTTCAAAACTTGAAAAGCTTGAAATGGAACACCCGAAATCTTT 1079 Query 1100 AATTTACGATGCATGTCACCAAAAGGACCTTGAAGCTCTTCATCAGATTCTTGAAGCAAT 1159 ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| Sbjct 1080 AATTTACGATGCATGTCACCAAATGGACCTTGCAGCTCTTCATCAAATTCTTGAAGCAAT 1139 Query 1160 GGAGTACAAAGAAGATGAAGTTACTTGCGAGCTCTCTTTCCAGCAATGGGCTCAACAGAT 1219 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1140 GGAGTACAAAGAAGATGAAGTTACTTGTGAGCTCTCTTTCCAGCAATGGGCTCAACAGAT 1199 Query 1220 AAAAGATGTGTGCAACACTAGACAACAAGGCGATTCGGCTTTTCGGAACAAAAATTTCGA 1279 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1200 AAAAGATGTGTGCAACACTAGACAACAAGGCGATTCGGCTTTTCGGAACAAACATTTCGA 1259 Query 1280 ATCTGCTATCGAAAAATATACTCAGTTCATAGAAACAGGAATCATGATCTCTCCTACTGT 1339 ||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 1260 ATCTGCTATTGATAAATATACTCAGTTCATAGAAATAGGAATCATGATCTCTCCCACTGT 1319 Query 1340 TTATGCACGAAGAAGCATGTGCTATCTCTTCTGCGACCAACCAGATGCAGCACTTCGAGA 1399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 TTATGCACGAAGAAGCATGTGCTATCTCTTCTGCGACCAACCAGATGCAGCACTTCGAGA 1379 Query 1400 CGCGATGCAAGCACAATGTGTTTACTCCGACTGGCCAACTGCATTTTACCTTCAGGCAGT 1459 ||||||||||||||||||||| || || ||||||||||||||||||||||||||||| || Sbjct 1380 CGCGATGCAAGCACAATGTGTCTATTCGGACTGGCCAACTGCATTTTACCTTCAGGCCGT 1439 Query 1460 GGCTCTTTC-AAAGCTGAATATGGTCGAAGATTCAGCTAACATGCTAAAAGAAGCCTTGA 1518 ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1440 GGCTCTTTCCAAA-CTGAATATGGTCGAAGATTCAGCTACCATGCTAAAAGAAGCCTTGA 1498 Query 1519 TCTTGGAAGATAAGAGAGGCTCATAA 1544 |||||||||||||||||||||||||| Sbjct 1499 TCTTGGAAGATAAGAGAGGCTCATAA 1524 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77208438210 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5