BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923604 Length=556 Score E Sequences producing significant alignments: (Bits) Value AT3G53320.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 348 4e-95 AT5G05110.1 | Symbols: | Cystatin/monellin family protein | ch... 126 2e-28 > AT3G53320.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink). | chr3:19769176-19772369 REVERSE LENGTH=1974 Length=1974 Score = 348 bits (188), Expect = 4e-95 Identities = 231/251 (92%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 227 AACTGTCCAGCATGATGGAGAA-CAATCACAAGAGTGGG-AGAAAGCTTTACCTACCATT 284 ||||||||||||||||||| || |||||| ||||||||| ||||||||||||| |||||| Sbjct 432 AACTGTCCAGCATGATGGA-AAGCAATCATAAGAGTGGGAAGAAAGCTTTACCGACCATT 490 Query 285 ATAGAGGATATTAATAGATCTACGGAATCCATTTCTACATTTCAAAGTGACTGCACTGTG 344 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 491 CTAGAGGATATTAATAGATCTACAGAATCCATTTCTACATTTCAAAGTGACTGCACTGTG 550 Query 345 GAGAATAGTCAGGAGTTTGTTTTGTTTGAGGATGTAAGAGCGTCTATTCAAAGGTCTGCT 404 ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 551 GAGAACAGTCAGGAGTTTGTTTTGTTTGAGGATGTTAGAGCATCTATTCAAAGGTCTGCT 610 Query 405 AAAACATCTGATGCTGCAACGCCCGGGAAAAATAATGAAGT-GAGAGAAACAGAAGTAGC 463 ||||||||||||| |||||| |||||||||| ||||| || ||||| |||||| ||||| Sbjct 611 AAAACATCTGATGTTGCAACACCCGGGAAAAGTAATGT-GTTGAGAGCAACAGACGTAGC 669 Query 464 AATGACCCCAA 474 ||| | ||||| Sbjct 670 AATTAGCCCAA 680 Score = 159 bits (86), Expect = 2e-38 Identities = 186/229 (81%), Gaps = 28/229 (12%) Strand=Plus/Plus Query 1 CGATGGCCTTGGTTTGATTGATGTCGCT-TCTGAAGACGATAGCCTTCTCTTCTCCTCCT 59 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | Sbjct 130 CGATGGCCTTGGTTTGATTGATGTCGCTGT-TGAAGACGATAGCCTTCTCTTCTCCGAGT 188 Query 60 TTCCCGACCCACCCAGCTACGAGTTTTCCGGCAGATAAGGATGAAAATTGTTTGAAGGAT 119 || |||| || || || || | | | | || ||| | |||||||||| Sbjct 189 TTTCCGAG--AC--AGATA--AG------G--A--T--G-AT-AAA-T-GTTTGAAGGAG 226 Query 120 GACAAAGATCTAAATTTCATGAGGGATACACTA-TATTGTGATGATGAGATA-TTGGTTT 177 || ||||||||||| |||||||||||||||| | |||||||||||||||||| ||| || Sbjct 227 GATAAAGATCTAAACTTCATGAGGGATACAC-AGTATTGTGATGATGAGATACTTGCTT- 284 Query 178 CTACAATTGAAGAGAAGGAAGAGGTACTTCAACCTCATGAGTCGCCTGA 226 || | ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 285 CTTCTGTTGAAGAGAAGGAAGAGGTGCTTCAACCTCACGAGTCGCCTGA 333 > AT5G05110.1 | Symbols: | Cystatin/monellin family protein | chr5:1507419-1508867 REVERSE LENGTH=997 Length=997 Score = 126 bits (68), Expect = 2e-28 Identities = 76/80 (95%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 474 ATGGATGAACTTCAAGCAGCTTCAGGAGTTCAAGAATGTTATCCCCTCCTTCACTATCTC 533 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 465 ATGGATGAACTTTAAGCAGCTTCAGGAGTTCAAGAATATTATCCCCTCCTTCACTATCTC 524 Query 534 TGACCTTGGCTTGAAATCAG 553 |||||||||||| ||| ||| Sbjct 525 TGACCTTGGCTTCAAACCAG 544 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26674332057 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5