BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923607 Length=1558 Score E Sequences producing significant alignments: (Bits) Value AT1G51260.1 | Symbols: LPAT3 | lysophosphatidyl acyltransferase... 1738 0.0 AT1G51310.1 | Symbols: | transferases;tRNA (5-methylaminomethy... 110 6e-23 > AT1G51260.1 | Symbols: LPAT3 | lysophosphatidyl acyltransferase 3 | chr1:19003376-19005641 REVERSE LENGTH=1344 Length=1344 Score = 1738 bits (941), Expect = 0.0 Identities = 1076/1140 (94%), Gaps = 14/1140 (1%) Strand=Plus/Plus Query 16 TCTCATACATGACA-ATCCCTGCTGCTCTTGTCTTTATCCCTGTTGGCATCCTCTTCTTG 74 ||||| |||||| | |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 122 TCTCAGACATGA-AGATCCCTGCGGCTCTTGTCTTTATCCCTGTTGGTGTCCTCTTCTTG 180 Query 75 GTCTCAGGGCTCATCGTCAACAGCATTCAGCTTGTGTTCTTCATCATTGTTCGTCCATTC 134 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 181 ATCTCAGGGCTCATCGTCAACATCATTCAGCTTGTGTTCTTCATCATTGTTCGTCCATTC 240 Query 135 TCAAGAAGTTTGTATAGAAGAATCAACAAAAATGTTGCGGAATTACTTTGGTTGCAGCTC 194 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 241 TCAAGAAGTTTGTATAGAAGAATAAACAAAAATGTTGCGGAATTACTTTGGTTGCAGCTC 300 Query 195 ATATGGTTGTCTGATTGGTGGGCTTGTATAAAGATCAATTTATACGCT-GATGCAGAGAC 253 |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 301 ATATGGTTGTTTGATTGGTGGGCTTGTATAAAGATCAATTTATACG-TCGATGCAGAGAC 359 Query 254 TCTAGAGTTAATTGGGAAAGAACATGCACTTGTCTTAAGCAATCATCGAAGTGACATTGA 313 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 360 TCTAGAGTTAATTGGGAAAGAACACGCACTTGTCTTAAGCAATCATCGAAGTGACATTGA 419 Query 314 TTGGCTTATTGGATGGGTCATGGCTCAGCGTGCAGGTTGTCTTGGAAGCTCTTTAGCCAT 373 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 420 TTGGCTTATTGGATGGGTCATGGCTCAGCGTGTAGGTTGTCTTGGAAGCTCATTAGCCAT 479 Query 374 CATGGCA-AAAGAAGCCAAGTATCTTCCAATCATAGGTTGGTCGATGTGGTTTTCGGATT 432 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 CAT-GAAGAAAGAAGCCAAGTATCTTCCAATCATAGGTTGGTCGATGTGGTTTTCGGATT 538 Query 433 ACATTTTCTTGGAAAGAAGTTGGGCTAAAGATGAGAATACCCTCAAGGCAGGTTTTAAAC 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 ACATTTTCTTGGAAAGAAGTTGGGCTAAAGATGAGAATACCCTCAAGGCAGGTTTTAAAC 598 Query 493 GACTTGAGGACTTTCCTATGACATTTTGGCTAGCTCTTTTCGTTGAAGGAACTCGTTTCA 552 ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 599 GACTTGAAGACTTTCCAATGACATTTTGGTTAGCTCTTTTCGTTGAAGGAACTCGTTTCA 658 Query 553 CTCAAGAGAAGCTTGAAGCTGCTCAAGATTACGCCTCTATCAGAAGCTTACCATCACCTC 612 |||| ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct 659 CTCAGGAGAAGCTTGAAGCTGCTCAAGAGTACGCCTCTATCAGAAGCTTACCGTCTCCTC 718 Query 613 GAAATGTTCTGATTCCTCGTACAAAGGGATTTGTTTCAGCGGTATCTCAAATACGGTCAT 672 |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||||| Sbjct 719 GAAATGTTTTGATTCCTCGTACAAAGGGATTTGTTTCGGCAGTGTCTGAAATACGGTCAT 778 Query 673 TTGTTCCTGCAATTTATGACTGCACCTTTACCGTTCATAACAATCAGCCTACACCAACTC 732 ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 779 TTGTTCCTGCAATATATGACTGTACCTTAACCGTTCATAACAATCAGCCTACACCAACTC 838 Query 733 TGCTTAGGATGTTCAGTCGACAATCATCTGAGGTAAATTTGCAGATGAGACGTCACAAAA 792 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 839 TGCTTAGGATGTTCAGTGGACAATCATCTGAGATAAATTTGCAGATGAGACGTCACAAAA 898 Query 793 TGAGCGAGTTGCCAGAAACCGATGATGGCATTGCACAATGGTGCCAAGATCTATTTATCA 852 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 TGAGTGAGTTGCCAGAAACCGATGATGGCATTGCACAATGGTGCCAAGATCTATTTATCA 958 Query 853 CCAAGGATGCTCAACTTGAGAAATACTTCACAAAAAACGTATTT-AGCGACTTGGACGTT 911 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||| Sbjct 959 CCAAGGATGCTCAACTTGAGAAATACTTCACAAAAGACGT-TTTCAGCGACTTGGAAGTT 1017 Query 912 CACCAAATCAACCGGCCAATCAAACCATTGATCGTGGTCATCATTTGGTT-GTGTCTTC- 969 |||||||| |||||||||||||| ||||| |||||||||||||||||||| | || ||| Sbjct 1018 CACCAAATTAACCGGCCAATCAAGCCATTAATCGTGGTCATCATTTGGTTAG-GT-TTCC 1075 Query 970 TTATATACGGTGGTTTTAAGCTATTCCAATGGCTTTCCTTAGTGGCCTCGTGGAAGATCA 1029 || ||| ||||||||| |||||| | ||||||||||| ||||||||||||||||||||| Sbjct 1076 TTGTATTCGGTGGTTTCAAGCTACTGCAATGGCTTTCAATAGTGGCCTCGTGGAAGATCA 1135 Query 1030 TTCTTTTGTTTGTGTTCTTCTTGGTGATTGCAACTATAACAATGCAAGTACTTGTTCAAA 1089 ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct 1136 TTCTTTTGTTTGTGTTCTTCTTGGTCATTGCAACTATAACAATGCAAATACTAATTCAAT 1195 Query 1090 CGTCTGAGTCACAACGTTTCA-CTCCTGCCAAGAGACCTTTAGAAGAACAGCTTATTTCT 1148 |||||||||||||||||| || |||| |||||||||||| || ||||||||||||||||| Sbjct 1196 CGTCTGAGTCACAACGTT-CAACTCCAGCCAAGAGACCTCTACAAGAACAGCTTATTTCT 1254 > AT1G51310.1 | Symbols: | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases | chr1:19018979-19021804 REVERSE LENGTH=1769 Length=1769 Score = 110 bits (59), Expect = 6e-23 Identities = 68/72 (94%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 1284 GTCCGACATGGGCCTAGCTTCTACAGCTGCAGTTTTGAAATGGAAGCAGACGGAGATGTT 1343 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1231 GTCCGACATGGGCCTGGCTTCTACAGCTGCAGTTTTGAAATGGAAGGAGACGGAGATGTT 1290 Query 1344 CCAGTTGCTGCA 1355 |||||| |||| Sbjct 1291 GCAGTTG-TGCA 1301 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76907234940 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5