BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923635
Length=2138
Score E
Sequences producing significant alignments: (Bits) Value
AT1G51500.1 | Symbols: CER5, D3, ABCG12, WBC12, ATWBC12 | ABC-2... 3578 0.0
AT3G21090.1 | Symbols: | ABC-2 type transporter family protein... 1733 0.0
> AT1G51500.1 | Symbols: CER5, D3, ABCG12, WBC12, ATWBC12 | ABC-2
type transporter family protein | chr1:19097797-19101080
REVERSE LENGTH=2342
Length=2342
Score = 3578 bits (1937), Expect = 0.0
Identities = 2071/2137 (97%), Gaps = 3/2137 (0%)
Strand=Plus/Plus
Query 3 TCTCTCTCTAATAAGTAAGGTTTTGATCTTTTTCAAGATCAAACaaaaaaaaaTGGAGTT 62
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 58 TCTCTCTCTAATAAGTAAGGTTTTGATCTTTTTCAAGATCAAAC-AAAAACAATGGAGTT 116
Query 63 AGAGAGTACGAGCAATGGCCGACGTCCACCGCCGCCGGCAGAGATTGGCCGTGGGGCGTA 122
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 117 AGAGAGTACGAGCAATGGCCGACGTCCGCCGCCACCGGCAGAGATTGGCCGTGGGGCGTA 176
Query 123 CTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACTTTAGTGGTGGTCCGACTCGAAG 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 CTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACTTTAGTGGTGGTCCGACTCGAAG 236
Query 183 ATTGCTCGATGGACTT-AACGGTCATGCTGAACCGGGTCGGATTATGGCCATTATGGGTC 241
||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 237 ATTGCTCGATGGA-TTAAACGGTCATGCTGAACCAGGTCGGATTATGGCCATTATGGGTC 295
Query 242 CTTCCGGATCCGGCAAGTCTACGCTTCTTGATTCTCTCGCAGGTAGACTCGCAAGAAACG 301
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CTTCCGGATCCGGCAAGTCCACGCTTCTTGATTCTCTCGCAGGTAGACTCGCAAGAAACG 355
Query 302 TGATTATGACCGGTAATCTTCTATTGAACGGAAAGAAGGCAAGACTAGACTACGGCCTCG 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 356 TGATTATGACCGGTAATCTTCTATTGAACGGAAAGAAGGCAAGACTAGACTACGGTCTCG 415
Query 362 TCGCTTATGTAACACAAGAGGACATTTTGATGGGAACACTAACGGTGAGGGAGACAATAA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 TCGCTTATGTAACACAAGAGGACATTTTGATGGGAACACTAACGGTGAGGGAGACAATAA 475
Query 422 CATACTCAGCTCATCTAAGGCTGTCTAGTGATTTGACCAAAGAAGAAGTCAACGACATTG 481
||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||
Sbjct 476 CATACTCAGCTCATCTACGGCTATCAAGTGATTTGACCAAAGAAGAAGTCAACGACATTG 535
Query 482 TTGAAGGAACAATCATTGAGCTTGGTCTTCAAGATTGTGCAGACAGAGTCATAGGTAATT 541
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 536 TTGAAGGAACAATCATTGAACTTGGTCTTCAAGATTGTGCAGACAGAGTCATAGGTAATT 595
Query 542 GGCACTCTAGAGGAGTGAGTGGCGGTGAGAGGAAACGCGTTAGCGTTGCGTTGGAGATCT 601
|||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 596 GGCATTCTAGAGGAGTGAGTGGCGGCGAGAGGAAACGCGTCAGCGTTGCGTTAGAGATCT 655
Query 602 TAACGCGGCCGCAAATTTTGTTTCTTGATGAACCCACTAGTGGTTTGGACAGTGCTTCTG 661
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 656 TAACGCGACCGCAAATTTTGTTTCTTGATGAACCTACTAGTGGTTTGGACAGTGCTTCTG 715
Query 662 CTTTCTTTGTGATTCAAGCGCTTAGAAATATCGCTCGAGATGGTGGTAGAACCGTTGTTT 721
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 716 CTTTCTTTGTGATTCAAGCGCTAAGGAATATCGCTCGAGATGGTGGTAGAACCGTTGTTT 775
Query 722 CATCGATTCACCAGCCTAGTAGCGAAGTTTTCGCTCTCTTTGATGATCTATTTTTGCTCT 781
|||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 776 CATCGATTCATCAACCTAGTAGCGAAGTTTTTGCTCTCTTTGATGATCTTTTTTTGCTCT 835
Query 782 CTAGTGGAGAGACTGTTTATTTTGGCGAGTCCAAGTTTGCTGTTGAGTTCTTTGCCGAAG 841
||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 836 CTAGTGGTGAGACTGTTTATTTTGGTGAATCCAAGTTTGCTGTTGAGTTCTTTGCTGAAG 895
Query 842 CGGGTTTTCCTTGCCCGAAGAAACGGAATCCTTCTGATCATTTCCTAAGATGTATAAACT 901
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 896 CGGGGTTTCCTTGCCCGAAGAAACGGAATCCTTCTGATCATTTCCTAAGATGTATCAACT 955
Query 902 CGGACTTTGATACCGTTACAGCTACACTCAAAGGATCACAGAGGATTCGGGAGACACCAG 961
| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 956 CAGACTTTGATACCGTTACAGCTACACTCAAAGGATCTCAAAGGATTCGGGAGACACCAG 1015
Query 962 CTACATCAGATCCTTTAATGAATCTAGCAACATCTGAGATCAAAGCTAGACTTGTTGAGA 1021
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1016 CTACATCAGATCCTTTGATGAATCTAGCAACATCTGAGATCAAAGCTAGGCTTGTTGAGA 1075
Query 1022 ATTATCGTCGTTCAATCTACGCGAAATCTGCAAAATCTCGCATCCGTGAATTAGCTAGCA 1081
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1076 ATTATCGTCGTTCAGTCTACGCTAAATCTGCAAAATCTCGCATCCGTGAATTAGCTAGCA 1135
Query 1082 TTGAAGGACATCATGGGATGGAAGTGAGAAAGGGAAGCGAAGCGACGTGGTTTAAACAGC 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1136 TTGAAGGACATCATGGGATGGAAGTGAGAAAGGGAAGCGAAGCGACGTGGTTTAAGCAGC 1195
Query 1142 TAAGAACTTTGACAAAGAGATCATTTGTGAACATGACCCGCGATATTGGATACTATTGGT 1201
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1196 TAAGAACTTTGACAAAGAGATCATTTGTGAACATGTGCCGCGATATTGGATACTATTGGT 1255
Query 1202 CAAGAATTGTGATCTATATTGTGGTATCATTCTGCGTCGGGACAATCTTTTACGATGTAG 1261
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1256 CAAGAATTGTGATCTATATTGTGGTATCATTCTGTGTTGGGACAATCTTTTACGATGTAG 1315
Query 1262 GGCATAGCTACACATCGATCTTGGCTCGGGTTTCTTGTGGTGGATTCATTACCGGTTTCA 1321
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 GACATAGCTACACATCGATCTTGGCTCGGGTTTCTTGTGGTGGATTCATTACCGGTTTCA 1375
Query 1322 TGACTTTCATGTCCATTGGAGGGTTTCCTTCTTTCATTGAAGAAATGAAAGTGTTCTATA 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 TGACTTTCATGTCCATTGGAGGGTTTCCTTCTTTCATTGAAGAAATGAAAGTGTTCTATA 1435
Query 1382 AAGAGAGATTGAGTGGTTACTACGGTGTTTCGGTTTATATCATATCGAATTACGTCTCTT 1441
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1436 AAGAGAGATTGAGTGGTTACTACGGCGTTTCGGTTTATATCATATCGAATTACGTCTCTT 1495
Query 1442 CTTTCCCGTTCTTGGTAGCGATTGCGCTCATCACAGGGAGTATTACTTACAACATGGTGA 1501
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 CTTTCCCGTTCTTGGTAGCCATTGCGCTCATCACAGGGAGTATTACTTACAACATGGTGA 1555
Query 1502 AATTCCGTCCTGGGGTCTCGTATTGGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCT 1561
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1556 AATTCCGTCCTGGTGTCTCGCATTGGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCT 1615
Query 1562 CAGTCATTGAGAGTCTCATGATGGTTGTGGCTTCTCTTGTTCCAAATTTCTTGATGGGTC 1621
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1616 CCGTCATTGAGAGTCTCATGATGGTTGTGGCTTCTCTTGTTCCGAATTTCTTGATGGGTC 1675
Query 1622 TAATCACAGGAGCAGGCATCATTGGAATCATCATGATGACTTCTGGATTCTTCCGTTTGC 1681
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 TTATCACAGGAGCTGGCATCATTGGAATCATCATGATGACTTCTGGATTCTTCCGTTTGC 1735
Query 1682 TTCCCGATCTTCCAAAGGTTTTCTGGCGCTACCCGATTTCCTTCATGAGTTATGGTTCTT 1741
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 TTCCCGATCTGCCAAAGGTTTTCTGGCGCTACCCGATTTCCTTCATGAGTTATGGTTCTT 1795
Query 1742 GGGCTATTCAGGGAGCATACAAGAACGATTTTCTTGGTCTAGAGTTCGACCCGATGTTTG 1801
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1796 GGGCTATTCAGGGAGCATACAAGAATGATTTTCTTGGTCTAGAGTTTGACCCGATGTTTG 1855
Query 1802 CGGGGGAACCCAAGATGACAGGAGAGCAAGTGATAAACAAGATATTCGGAGTGCAAGTCA 1861
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1856 CGGGGGAACCAAAGATGACAGGAGAGCAAGTGATAAACAAGATATTTGGAGTGCAAGTCA 1915
Query 1862 CACATTCTAAGTGGTGGGACTTATCAGCGATCGTGTTGATCCTTGTGTGTTACCGCATTC 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 CACATTCTAAGTGGTGGGACTTATCAGCGATCGTGTTGATCCTTGTGTGTTACCGCATTC 1975
Query 1922 TCTTCTTCATAGTCTTGAAGCTTAAGGAGAGAGCAGAGCCGGCTTTGAAGGCGATACAAG 1981
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 TATTTTTCATAGTCTTGAAGCTTAAGGAGAGAGCAGAGCCGGCTTTGAAGGCGATACAAG 2035
Query 1982 CAAAGAGAACGATGAAGACTCTCAAAAAGAGACCGTCTTTCAAGAAAGTTCCATCTCTAT 2041
||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 2036 CAAAGCGAACGATGAAGAGTCTCAAAAAGAGACCTTCTTTCAAGAAAGTTCCATCTCTAT 2095
Query 2042 CTTCACTATCTTCAAGGAGACACCAACCTCTACACTCACTTTCTTCTCAAGAAGGTCTTA 2101
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2096 CATCACTATCTTCAAGGAGACACCAACCTCTACATTCACTTTCTTCTCAAGAAGGTCTTA 2155
Query 2102 CCTCTCCAATTAATTAAAGACTATATCTATATGTGTA 2138
|||||||||||||||||||| ||||||||| ||||||
Sbjct 2156 CCTCTCCAATTAATTAAAGATTATATCTATTTGTGTA 2192
> AT3G21090.1 | Symbols: | ABC-2 type transporter family protein
| chr3:7391438-7395041 REVERSE LENGTH=2243
Length=2243
Score = 1733 bits (938), Expect = 0.0
Identities = 1688/2045 (83%), Gaps = 72/2045 (4%)
Strand=Plus/Plus
Query 103 GAGATTG-GCCGTGGGGCGTACTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACTT 161
|||| || ||||||| ||||| |||||||||||||| ||||||||||| ||||| || ||
Sbjct 160 GAGA-TGAGCCGTGGAGCGTATTTGGCGTGGGAAGACTTGACGGTGGTAATACCCAA-TT 217
Query 162 T-AGTGGTGGTCCGACTC-GAAGATTGCT-CGATGGACTTAACGGTCATGCTGAACCGGG 218
| |||| |||||| || | |||| ||||| | | || || |||||| |||| ||||||||
Sbjct 218 TCAGTGATGGTCCAAC-CAGAAGGTTGCTCCAAAGG-CTAAACGGTTATGCAGAACCGGG 275
Query 219 TCGGATTATGGCCATTATGGGTCCTTCCGGATCCGGCAAGTCTACGCTTCTTGATTCTCT 278
|||||| ||||| || |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct 276 TCGGATCATGGCTATAATGGGTCCTTCCGGATCCGGAAAGTCCACTCTTCTTGACTCTCT 335
Query 279 CGCAGGTAGACTCGCAAGAAACGTGATTATGACCGGTAATCTTCTATTGAACGGAAAGAA 338
|||||||||||||||||||||||| | |||||||||||||||||| ||||||| |||||
Sbjct 336 TGCAGGTAGACTCGCAAGAAACGTGGTCATGACCGGTAATCTTCTACTGAACGGCAAGAA 395
Query 339 GGCAAGACTAGACTACGGCCTCGTCGCTTATGTAACACAAGAGGACATTTTGATGGGAAC 398
|| ||| |||||||||| ||||| || ||||| |||||||||||| | ||| |||| ||
Sbjct 396 AGCTAGATTAGACTACGGTCTCGTAGCATATGTGACACAAGAGGACGTATTGTTGGGGAC 455
Query 399 ACTAACGGTGAGGGAGACAATAACATACTCAGCTCATC-TAAGGCTGT-CTAGTGATTTG 456
|||||| ||||||||||||||||||||||||||||| | | || || | | |||||| ||
Sbjct 456 ACTAACAGTGAGGGAGACAATAACATACTCAGCTCA-CTTGAGACT-TCCAAGTGATATG 513
Query 457 ACCAAAGAAGAAGTCAACGACATTGTTGAAGGAACAATCATTGAGCTTGGTCTTCAAGAT 516
| ||||| ||||| | ||||| || ||||| |||||||| |||||||||||||||||
Sbjct 514 TCTAAAGAGGAAGTGAGTGACATCGTGGAAGGCACAATCATGGAGCTTGGTCTTCAAGAC 573
Query 517 TGTGCAGACAGAGTCATAGGTAATTGGCACTCTAGAGGAGTGAGTGGCGGTGAGAGGAAA 576
||| ||||||||||||| || || |||||| | |||||||| ||||||||||||||||||
Sbjct 574 TGTTCAGACAGAGTCATTGGAAACTGGCACGCCAGAGGAGTTAGTGGCGGTGAGAGGAAA 633
Query 577 CGCGTTAGCGTTGCGTTGGAGATCTTAACGCGGCCGCAAAT-TTTGTTTCTTGATGAACC 635
|| || ||| |||| ||||||||| | || || || ||||| || ||||| || |||||
Sbjct 634 CGTGTCAGCATTGCTTTGGAGATCCTCACTCGTCCTCAAATCCTT-TTTCTCGACGAACC 692
Query 636 CACTAGTGGTTTGGACAGTGCTTCTGC-TTTCTTTGTGATTCAAGCGCTTAGAAATATCG 694
||||||||||||||||||||||||||| ||| || || ||||| |||||||| || || |
Sbjct 693 CACTAGTGGTTTGGACAGTGCTTCTGCGTTT-TTCGTTATTCAGGCGCTTAGGAACATTG 751
Query 695 CTCGAGATGGTGGTAGAACCGTTGTTTCATCGATTCACCAGCCTAGTAGCGAAGTTTTCG 754
| || || ||| |||||||| | || ||| |||| ||||| || ||||| ||||| |
Sbjct 752 CACGCGA---TGGCAGAACCGTAATCTCCTCGGTTCATCAGCCCAGCAGCGAGGTTTTTG 808
Query 755 CTCTCTTTGATGATCTATTT-TTGCTCTCTAGTGGAGAGACTGTTTATTTTGGCG-AGTC 812
| || || |||||||| ||| ||||| || ||||| ||| |||| || ||||| | || |
Sbjct 809 CGCTGTTCGATGATCT-TTTCTTGCTTTCGAGTGGTGAGTCTGTCTACTTTGGTGAAG-C 866
Query 813 CAAGTTTGCTGTTGAGTTCTTTGCCGAAGCGGGTTTTCCTTGCCCGAAGAA-ACGGAATC 871
||||| |||||||||||||||||| ||| ||||||| || ||||||||||| | ||||||
Sbjct 867 CAAGTCTGCTGTTGAGTTCTTTGCAGAATCGGGTTTCCCGTGCCCGAAGAAGA-GGAATC 925
Query 872 CTTCTGATCATTTCCTAAGATGTATAAACTCGGACTTTGATACCGTTACAGCTACACTCA 931
|||| |||||||| || ||||||||||||||||||||||||| || |||||||||||||
Sbjct 926 CTTCCGATCATTTTCTGCGATGTATAAACTCGGACTTTGATACAGTCACAGCTACACTCA 985
Query 932 AAGGATCACAGAGGATTCGGGAGACACCAGCTACATCAGATCCTTTAATGAATCTAGCAA 991
||||||| ||||| |||| ||| ||||||||||||||||||||| |||||||||||||||
Sbjct 986 AAGGATCTCAGAGAATTCAGGAAACACCAGCTACATCAGATCCTCTAATGAATCTAGCAA 1045
Query 992 CATCTGAGATCAAAGCTAGACTTGTTGAGAATTATC--GTCGTTCAATCTACGCGAAATC 1049
|||||| ||||||||| || |||||||||||||| | | ||||||| || ||||||||
Sbjct 1046 CATCTGTGATCAAAGCAAGGCTTGTTGAGAATTA-CAAG-CGTTCAAAGTATGCGAAATC 1103
Query 1050 TGCAAAATCTCGCATCCGTGAATTAGCTAGCATTGAAGGACATCATGGGATGGAAGTGAG 1109
||||||||| | || || ||| || ||| ||| ||||| | || | ||||||| | ||
Sbjct 1104 CGCAAAATCTAGGATTCGAGAACTATCTAACATCGAAGGGC-TC--GAGATGGAAATAAG 1160
Query 1110 AAAGGGAAGCGAAGCGACGTGGTTTAAACAGCTAAGAACTTTGACA-AAGAGATCATTTG 1168
||| ||||| ||||| || |||| ||||| || || || || ||| | ||||||||
Sbjct 1161 AAAAGGAAGTGAAGCAACCTGGTGGAAACAACTTAGGACATTAACAGCA-AGATCATTCA 1219
Query 1169 TGAACATGACCCGCGATATTGGATACTATTGGTCAAGAATTGTGATCTATATTGTGGTAT 1228
| |||||| || ||| | || ||||||||| || |||| | | ||| ||||| || |
Sbjct 1220 TAAACATGTGTCGTGATGTCGGTTACTATTGGACACGAATAATAAGCTACATTGTTGTTT 1279
Query 1229 CAT-TCTGCGTCGGGACAATCTTTTACGATGTAGGGC-ATAGCTACACATCGATCTTGGC 1286
| | | |||| || || ||||| ||||| || ||| ||||||||||||| ||||| ||
Sbjct 1280 C-TATAAGCGTAGGAACCATCTTCTACGACGT-TGGCTATAGCTACACATCAATCTTAGC 1337
Query 1287 TCGGGTTTCTTGTGGTGGATTCATTACCGGTTTCATGACTTTCATGTCCATTGGAGGGTT 1346
|| |||||||| || |||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 1338 CCGTGTTTCTTGCGGCGGATTCATCACTGGTTTCATGACTTTCATGTCCATTGGAGGCTT 1397
Query 1347 TCCTTCTTTCATTGAAGAAATGAAAGTGTTCTATAAAGAGAGATTGAGTGGTTACTACGG 1406
||||||||| | ||||||||||| ||||||||||| ||||| | ||||| ||||||||
Sbjct 1398 CCCTTCTTTCCTCGAAGAAATGAAGGTGTTCTATAAGGAGAGGCTAAGTGGATACTACGG 1457
Query 1407 TGTTTCGGTTTATATCATATCGAATTACGTCTCTTCTTTCCCGTTCTTGGTAGCGATTGC 1466
||||||||||||||| | ||||||||| ||||||||||||| |||||||| |||||| |
Sbjct 1458 CGTTTCGGTTTATATCCTCTCGAATTACATCTCTTCTTTCCCTTTCTTGGTTGCGATTTC 1517
Query 1467 GCTCATCACAGGGAGTATTACTTACAACATGGTGAAATTCCGTCCTGGGGTCTCGTATTG 1526
| | |||||||| | ||||||||||||| ||||||| || ||||| ||| ||||| |||
Sbjct 1518 GGTTATCACAGGAACTATTACTTACAACTTGGTGAAGTTTCGTCCCGGGTTCTCGCATTA 1577
Query 1527 GGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCTCAGTCATTGAGAGTCTCATGATGGT 1586
|||||||||||||||||||| |||||||| || || || || |||||||||||||||||
Sbjct 1578 CGCTTTCTTCTGTCTCAACATCTTCTTCTCAGTTTCCGTGATAGAGAGTCTCATGATGGT 1637
Query 1587 TGTGGCTTCTCTTGTTCCAAATTTCTTGATGGGTCTAATCACAGGAGCAGGCATCATTGG 1646
|||||||||| |||||||||| |||||||||||||| ||||| ||||| ||| |||||||
Sbjct 1638 TGTGGCTTCTGTTGTTCCAAACTTCTTGATGGGTCTTATCACTGGAGCTGGCCTCATTGG 1697
Query 1647 AATCATCATGATGACTTCTGGATTCTTCCGT-TTGCTTCCCGATCTTCC-AAAGGT-TTT 1703
||||||||||||||||||||||||||||||| || ||||| |||||||| ||| | |||
Sbjct 1698 AATCATCATGATGACTTCTGGATTCTTCCGTCTT-CTTCCTGATCTTCCCAAAA-TCTTT 1755
Query 1704 CTGGCGCTACCCGATTTCCTT-CATGAGTTATGGTTCTTGGGCTATTCAGGGAGCATACA 1762
||||| |||||| |||| || ||| || || |||||||||||||| ||||||| ||||
Sbjct 1756 -TGGCGTTACCCGGTTTC-TTACATAAGCTACGGTTCTTGGGCTATCCAGGGAGGGTACA 1813
Query 1763 AGAACGATTTTCTTGGTCTAGAGTTCGACCCGAT-GTTTGCGGGGGAACCCAAGATGACA 1821
|||| || ||||| || ||||||||||| || || ||| |||| || || || ||||||
Sbjct 1814 AGAATGACTTTCTAGGGCTAGAGTTCGAGCC-ATTGTTCCCGGGTGAGCCGAAAATGACA 1872
Query 1822 GGAGAGCAAGTGATAAACAAGATATTCGGAGTGCAAG-TCACACATTCTAAGTGGTGGGA 1880
|||||| |||||||| | ||| | || |||||| ||| | ||| |||| || ||||||||
Sbjct 1873 GGAGAGGAAGTGATAGAGAAGGTCTTTGGAGTG-AAGGTGACATATTCAAAATGGTGGGA 1931
Query 1881 CTTATCAGCGATCGT-GTTGATCCTTGTGTGTTACCG-CATTCTCTTCTTCATAGT-CTT 1937
|||| | ||| | || | ||||||||||||||| | | ||||||||||| | || ||
Sbjct 1932 CTTAGCTGCGGTAGTAGCA-ATCCTTGTGTGTTACAGGC-TTCTCTTCTTCGTGGTTCTA 1989
Query 1938 GAAGCTTAAGGAGAGAGCAG-AGCCGGCTTTGAAGGCGATACAAGC-AAAGAGAACGATG 1995
||||| | ||||||||||| | || |||||||||||||| || || ||| |||||||||
Sbjct 1990 -AAGCTGAGGGAGAGAGCAGGA-CCTGCTTTGAAGGCGATTCAGGCGAAA-AGAACGATG 2046
Query 1996 AAGACTCTCAAAAAGAGACCGTCTTTCAAGA-AA-G--TTC-CA-TCTCTATC--T-TCA 2046
| || ||| | | |||||| ||||| |||| || | ||| | ||||| || | ||
Sbjct 2047 AGGAATCTTGATAGGAGACCTTCTTTTAAGAGAATGCCTTCTCTGTCTCTTTCACTGTCG 2106
Query 2047 -CTAT--CTTCAAGGAGACACCAACCTCTACACTCACTTTCTTCTCAAGAAGGTCTTACC 2103
| || |||||||||||||||||||||| | ||||||||||||||||||||| |||| |
Sbjct 2107 TCAATGTCTTCAAGGAGACACCAACCTCTCCGCTCACTTTCTTCTCAAGAAGGCCTTAAC 2166
Query 2104 TCTCC 2108
|||||
Sbjct 2167 TCTCC 2171
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106023551040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5