BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923651
Length=1341
Score E
Sequences producing significant alignments: (Bits) Value
AT1G51630.1 | Symbols: | O-fucosyltransferase family protein |... 2200 0.0
AT3G21190.1 | Symbols: | O-fucosyltransferase family protein |... 1173 0.0
> AT1G51630.1 | Symbols: | O-fucosyltransferase family protein
| chr1:19141973-19144294 REVERSE LENGTH=1652
Length=1652
Score = 2200 bits (1191), Expect = 0.0
Identities = 1290/1339 (96%), Gaps = 2/1339 (0%)
Strand=Plus/Plus
Query 4 AAGAAGAAGAAGAAGGAGATGGGTGTGGATTTGAGGCAAGTGGTGGCTGGAATTCTGACC 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 195 AAGAAGAAGAAGAAGGAGATGGGTGTGGATTTGAGGCAAGTGGTGGCTGGAATACTCACC 254
Query 64 ATTACCATGTTTGTGATGCTTGGACAAATGCTTCATAGAGATTACTTTGATGCTGTTCAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 ATTACCATGTTTGTGATGCTTGGACAAATGCTTCATAGAGATTACTTTGATGCTGTTCAG 314
Query 124 GAGAAAGTTCAAGGAGATGCACATGATATTGAATTCCAGGGATCAAGAGTAGCTGTTGAA 183
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 315 GAGAAAGTTCAAGGAGATGCACATGATATTGAATTCCATGGATCAAAAGTAGCTGTTGAA 374
Query 184 GATGGACTTGTTAGAGCCTTTGAAGG-TGGGAATAAAGGTCCTTGGATGGAAGATAGCCA 242
|||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||
Sbjct 375 GATGGACTTGTTAGAGCCTTTG-AGGCTGGGACTAAAGGGCCTTGGATGGAAGATAGTCA 433
Query 243 TGGACTTAAACCTTGTTGGTCTATATCTCAATCTGATGAAGCGGTATCGTCGAAGGGTTA 302
|| ||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct 434 TGAACTCAAACCTTGTTGGTCAATTTCTCAATCTGATGAAGCGGTATCGTCAAAGGGTTA 493
Query 303 TGTTACATTCTCCTTAACGAATGGTCCTGAATACCATGTTTCTCAGATTACGGATGCCGT 362
||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 494 CGTTACATTCTCCTTAACAAATGGTCCTGAATACCATGTCTCTCAGATTACTGATGCCGT 553
Query 363 TATGGTGGCGAAGCATCTTGGAGCAACTCTTGTGCTTCCAGACATTAGAGGAAGCAAACC 422
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 554 GATGGTGGCGAAGCATCTTGGAGCAACTCTTGTGCTTCCTGACATTAGAGGAAGCAAACC 613
Query 423 TGGTGATGAAATGAACTTTGAAGATATCTATGATGTGGATAAACTCATTAAAAGCTTGGA 482
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 614 TGGTGATGAAATGAAATTTGAAGATATCTATGATGTGGATAAACTCATTAAAACCTTGGA 673
Query 483 AAGTGTCGTCAAAGTTGTAAGGAAATTGCCGAGCCATGTATCTCTAAGAGATATCGCCAT 542
||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct 674 AAGTGTCGTCAAAGTTGTAAGAAAATTGCCGAGCCACGTATCTCTAAGAGATATTGCCAT 733
Query 543 TGTTAAGGTTCCTACCCGAGTTGCAGAAGATTACATCAAGGAACATATTGACCCCATCTT 602
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 734 TGTCAAAGTTCCTACCCGAGTTGCAGAAGATTACATCAAGGAACATATTGATCCCATCTT 793
Query 603 CAAATCAAAAGGGAATATAAGAGTTACAACCTATTTCCCTTCTGTGAATTTGAGGAAATC 662
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 794 CAAATCAAAAGGGAACATAAGGGTTACAACCTATTTCCCTTCTGTGAATTTGAGGAAATC 853
Query 663 TTCGCAGGGTGCTGAAACCGACCCTGTCTCTTGTTTGGCAATGTTTGGCTCCTTGGAATT 722
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 854 TTCGCAGGGTGCTGAAACCGACCCTGTCTCTTGTTTGGCAATGTTTGGTTCCTTGGAATT 913
Query 723 GCAACAGGGAGTGAATGAATTGGTTGAATCGATGATTCAGCGGTTGAAGACACATAGCAA 782
||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 914 GCAACCTGCAGTGAATGAATTGGTTGAGTCGATGATTCAGCGGTTGAAGACACATAGCAA 973
Query 783 GAAATCCGGTGGCCGTTTCATAGCCATAGACTTGAGGGTTGAGATACTTGAAAAGAAAAA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 GAAATCCGGTGGCCGTTTCATAGCCATAGACTTGAGGGTTGAGATACTTGAAAAGAAAAA 1033
Query 843 TTGCCATGAAACAGGTGCTGTGGGATCCAAAACATGTTACAACGCACAAGAGATTGCATT 902
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 CTGCCATGAAACAGGTGCAGTGGGATCCAAAACATGTTACAACGCACAAGAGATTGCATT 1093
Query 903 GTTCTTGAGGAAGCTTGGATTTGACAGCGATACAACTATATATCTGACTCAGCCAAGATG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 GTTCTTGAGGAAGCTTGGATTTGACAGCGATACAACTATATATCTGACTCAGCCAAGATG 1153
Query 963 GGAGAGCAGCCTCAATATTCTTAAGGACATTTTCCCGAAAACATATACTAAGGAGGCGAT 1022
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1154 GGAGAGCAGCCTCAATATTCTTAAGGACATTTTCCCAAAAACATATACTAAGGAGGCGAT 1213
Query 1023 AATGCCGTCAGATAAGAAATCGAAGTACCTTGAATTAGAAAATTCTGAATATGAAAATGT 1082
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1214 AATGCCGTCAGATAAGAAAACGAAGTACCTTGAATTAGAGAATTCTGAATATGAAAATGT 1273
Query 1083 TATTGACTTCTACATAAGTTCAAGGAGTGATGTATTTGTGCCAGCCATTCCCGGTCTGTT 1142
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1274 TATTGACTTCTACATAAGTTCAAGGAGTGATGTATTTGTACCAGCCATTCCCGGTCTGTT 1333
Query 1143 TTACGCCAACACAGTTGGAAAAAGGATAGCTTTAGGCAAGCCTCAAGTTCTCGTTCCAGC 1202
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 TTACGCCAATACAGTTGGAAAAAGGATAGCTTTAGGCAAGCCTCAAGTTCTCGTTCCAGC 1393
Query 1203 CGAGATCTCAGGGACATCCGGTGTTCCCACTAATTACATCTCTCCCTACATATCAAAGAA 1262
|||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||
Sbjct 1394 CGAGATCTCAGGGACATCCGGTCTTCCCGCTAATTACATATCTCCCTATATATCAAAGAA 1453
Query 1263 GAACCACTTGGCGTATTCATGCTTTTGCTGAACTTCTCTGATGTAACTTATGAGGGAAAT 1322
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1454 GAACCACTTGGCGTATTCATGCTTTTGCTGAACTTCTCTGGTGTAACTTTTGAGGGAAAT 1513
Query 1323 GTTTTGCTAAAGTGATCTT 1341
||||||||||||||||||
Sbjct 1514 ATTTTGCTAAAGTGATCTT 1532
> AT3G21190.1 | Symbols: | O-fucosyltransferase family protein
| chr3:7432299-7434665 REVERSE LENGTH=1671
Length=1671
Score = 1173 bits (635), Expect = 0.0
Identities = 1088/1302 (84%), Gaps = 49/1302 (4%)
Strand=Plus/Plus
Query 22 ATGGGTGTGGATTTGAGGCAAGTGGTGGCTGGAATTCTGACCATTACCATGTTTGTGATG 81
|||||||| |||||||||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct 123 ATGGGTGTTGATTTGAGGCAAGTAGTTGCTGGTATTCTCACCATTACCATGTTTGTGATG 182
Query 82 CTTGGACAAATGCTTCATAGAGATTACTTTGATGCTGTTCAGGAGAAAGTTCAAGGAGAT 141
|||||||| |||||||||||||||||||||||| || |||||||||||| ||| ||||||
Sbjct 183 CTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAGGGAGAT 242
Query 142 GCACATGATATTGAATTCCAGGGATC-AAGAGTAGCTGTTGAA-GATGGACTTGTTAGAG 199
||||| ||||||||||| | ||||| || ||| |||| ||| ||||| ||||| ||
Sbjct 243 GCACAAGATATTGAATTTGAAGGATCTAA-AGTCTCTGT-GAAAGATGGTCTTGTCGGAA 300
Query 200 CCTTTGAAGGTGGGAATAAAGGTCCTTGGATGGAAGATAGC-CATGGA-CTTAAACCTTG 257
|| ||||||| | |||||| | |||||||||||||| | | || | |||| |||||
Sbjct 301 CCGTTGAAGGCAG---TAAAGGACTTTGGATGGAAGATAACAC-TG-ATCTTACTCCTTG 355
Query 258 TTGGTCTATATCT-CAATCTGATGAAGCGGTATCGTCGAA-GGGTTATGTTACATTCTC- 314
|||| | | || | | ||||||||| || ||||| ||||| |||| |||||||||||||
Sbjct 356 TTGGCCAACAT-TACTATCTGATGACGCTGTATCATCGAAAGGGT-ATGTTACATTCTCA 413
Query 315 CTTAACGAATGGTCCTGAATACCATGTTTCTCAGATTACGGATGCCGTTATGGTGGCGAA 374
|||| | ||||||||||| |||||| | |||||||| || ||||| || |||||||| ||
Sbjct 414 CTTACC-AATGGTCCTGAGTACCATATCTCTCAGATCACTGATGCTGTAATGGTGGCTAA 472
Query 375 GCATCTTGGAGCAACTCTTGTGCTTCCAGACATTAGAGGAAGCAAACCTGGTGATGAAAT 434
|||||||||||||||||| || ||||| || || |||||||||||||||||||||||||
Sbjct 473 GCATCTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAAG 532
Query 435 GAACTTTGAAGATATCTATGATGTGGATAAACTCATTAAAAGCTTGGAAAGTGTCGTCAA 494
||| ||||||||||||||||||| |||||| || |||||||||||||||| |||||| ||
Sbjct 533 GAATTTTGAAGATATCTATGATGCGGATAAGCTGATTAAAAGCTTGGAAAATGTCGTTAA 592
Query 495 AGTTGT-AAGGAAATTGCC-GA-GCCATGTATCTCTAAGAGAT-ATCGCCATTGTTAAGG 550
|||||| || |||||||| || | | || |||||||| || || |||||||| ||||
Sbjct 593 AGTTGTGAAA-AAATTGCCTGAAGA-A-GTTTCTCTAAG-GAACATGGCCATTGTGAAGG 648
Query 551 TTCCTACCCGAGTTGCAGAAGATTACATCAAGGAACATATTGACCCCATCTTCAAATCAA 610
| |||||| ||||| ||||||||||||| || || || ||||| |||||||| ||||| |
Sbjct 649 TCCCTACCAGAGTTACAGAAGATTACATTAAAGAGCACATTGATCCCATCTTTAAATCTA 708
Query 611 AAGGGAATATAAGAGTTACAACCTATTTCCCTTCTGTGAATTTGAGGAAATCTTCGCAGG 670
|||| || || ||||| || | || ||||||||||| || ||||| ||||| || || |
Sbjct 709 AAGGAAACATTCGAGTTGCATCATACTTCCCTTCTGTAAACTTGAGAAAATCCTCACAAG 768
Query 671 GTG-CTGAAACCGACCCTGTCTCTTGTTTGGCAATGTTTGGCTCCTTGGAATTGCAACAG 729
|| | ||||| || ||||| | ||||| ||||||||||| || ||||| |||||||
Sbjct 769 ATGGC-GAAACTGATCCTGTAGCCTGTTTAGCAATGTTTGGGTCTTTGGAGTTGCAACCT 827
Query 730 GGAGTGAATGAATTGGTTGAATCGATGATTCAGCGGTTGAAGACACATAGCAAG-AAATC 788
| |||||||| | ||| |||||| ||| || ||||||||| ||| |||||| | |||||
Sbjct 828 GAAGTGAATGCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCC-GTAAATC 886
Query 789 CGGTGGCCGTTTCATAGCCA-TAGAC-TTGAGGGTTGAGATACTTGAAAAGAAAAATTGC 846
|||||||||||||||||| | ||||| || || | || |||||||| ||||||||||||
Sbjct 887 CGGTGGCCGTTTCATAGC-AGTAGACCTT-AGAATCGACATACTTGAGAAGAAAAATTGC 944
Query 847 CATGA-AACAGGTGCT-GT-GGGATCCAAAACATGTTACAACGCACAAGAGATTGCATTG 903
||| | ||| |||| | || ||| ||||| |||||||||||||| ||||||||||| ||
Sbjct 945 CAT-ACAACTGGTG-TAGTAGGG-TCCAAGACATGTTACAACGCTCAAGAGATTGCTTTA 1001
Query 904 TTCTTGAGGAAGCTTGGATTTGACAGCGATACAACTATATATCTGACTCAGCCAAGATGG 963
|||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||||||
Sbjct 1002 TTCTTGAGAAAGCTTGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGG 1061
Query 964 GAGAGCAGCCTCAATATTCTTAAGGACATTTTCCCGAAAACATAT-ACTAAGGAGGCGAT 1022
|| || ||||||||||| |||||||| || ||||| ||||||| | ||||||||||| ||
Sbjct 1062 GACAGTAGCCTCAATATCCTTAAGGATATCTTCCCAAAAACAT-TCACTAAGGAGGCAAT 1120
Query 1023 AATGCCGTCA-GATAAGAAATCGAAGTACCTTGAATTAGAAAATTCTGAATATGAAAATG 1081
||||||| || | ||||| ||| ||||||||||||| || | ||| || || |||||||
Sbjct 1121 AATGCCGGCAAG-TAAGAGATCAAAGTACCTTGAATCAGTGAGTTCCGAGTACGAAAATG 1179
Query 1082 TTATTGACTTCTACATAAGTTCAAGGAGTGATGTATTTGTGCCAGCCAT-TCCCGGTCTG 1140
|||| |||||||||||||| ||||| || ||||| ||||| |||||||| ||| ||||||
Sbjct 1180 TTATCGACTTCTACATAAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATCTCC-GGTCTG 1238
Query 1141 TTTTACGCCAACACAGTTGGAAAAAGGATAGCTTTAGGCAAGCCTCAAGT-TCTCGTTCC 1199
||||| || ||||| ||||| ||||||||||||||||| ||||||||||| | | |||||
Sbjct 1239 TTTTATGCAAACACCGTTGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGT-TAGTTCC 1297
Query 1200 AGCCGAGATCTCAGGGACATCCGGTGTTCCCACTA-ATTACATCTCTCCCTACATATCAA 1258
||| || ||||||| |||||| || || | || | ||| ||||||||| ||||| ||||
Sbjct 1298 AGCAGAAATCTCAGAGACATCTGGCCTTGCTAC-AGATTTCATCTCTCCATACATCTCAA 1356
Query 1259 AGAAGAACCACTTGGCGTATTCATGCTTTTGCTGAACTTCTC 1300
|||||||||| ||||| |||||||||||||||||| ||||||
Sbjct 1357 AGAAGAACCATTTGGCTTATTCATGCTTTTGCTGACCTTCTC 1398
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66013716675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5