BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg923735

Length=291
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G66658.2 | Symbols: ALDH22A1 | aldehyde dehydrogenase 22A1 |...   145    3e-34


> AT3G66658.2 | Symbols: ALDH22A1 | aldehyde dehydrogenase 22A1 
| chr3:2095105-2099151 REVERSE LENGTH=2165
Length=2165

 Score =  145 bits (78),  Expect = 3e-34
 Identities = 89/94 (95%), Gaps = 2/94 (2%)
 Strand=Plus/Plus

Query  76   TGATCGTTCTCGCCTTCGCTTACGCGATCTGCAAATTCTTTCTTATGCTCATTCCTCCCA  135
            ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct  158  TGATCGTCCTCGCCTTCGCTTACGCGATCTGCAAGTTCCTTCTTATGCTCATTCCTCCCA  217

Query  136  ATGTTCCTTCCATTGAC-TTAGACGCATCCGATG  168
            ||||||||||||||||| || |||||||||||||
Sbjct  218  ATGTTCCTTCCATTGACGTT-GACGCATCCGATG  250



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 13421488983


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5