BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923873 Length=1354 Score E Sequences producing significant alignments: (Bits) Value AT1G53280.1 | Symbols: | Class I glutamine amidotransferase-li... 2224 0.0 AT3G14990.1 | Symbols: | Class I glutamine amidotransferase-li... 1027 0.0 > AT1G53280.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:19864770-19867389 REVERSE LENGTH=1537 Length=1537 Score = 2224 bits (1204), Expect = 0.0 Identities = 1307/1356 (96%), Gaps = 9/1356 (1%) Strand=Plus/Plus Query 5 aaaaaaaaaaaCGTCAATGGCGTCGTCGTCGTCGTTGTGTCATTGCTATTTTAACCCAAT 64 |||||||||||||||||| | | |||||||||||||||||||| ||||||||||| ||| Sbjct 33 AAAAAAAAAAACGTCAAT-G-G-CGTCGTCGTCGTTGTGTCATCGCTATTTTAACAAAAT 89 Query 65 CACTGTCACTCCCTTCCCTAACACT---AAACGCAATCACTCTTCT-C--GACGAATCTC 118 ||||||||||||||| ||||||| |||| | |||||| |||| | |||||||||| Sbjct 90 CACTGTCACTCCCTTTTTTAACACTAAAAAACTCCATCACTATTCTCCGAGACGAATCTC 149 Query 119 TCTTCGTGTAAATCGACGATCCTTCTCTATCTCTGCAACTATGTCTTCATCTGCTAAGAA 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 150 TCTTCGTGTAAATCGACGATCCTTCTCTATCTCTGCAACTATGTCTTCATCTACTAAGAA 209 Query 179 GGTTTTGATTCCCGTTGCGCATGGTACGGAGCCGTTTGAAGCGGTGGTGATGATCGATGT 238 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 210 GGTTTTGATTCCTGTTGCTCATGGTACGGAGCCGTTTGAAGCGGTGGTTATGATCGATGT 269 Query 239 GCTACGGCGAGGCGGAGCGGATGTTACGGTGGCGTCCGTTGAGAATCAGGTCGGCGTTGA 298 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 270 GCTACGGCGAGGCGGAGCGGATGTTACGGTGGCTTCCGTTGAGAATCAGGTCGGCGTTGA 329 Query 299 TGCTTGCCATGGAATCAAGATGGTCGCTGATACTCTTCTCTCTGAGATCACCGACTCCGT 358 |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct 330 TGCTTGCCATGGAATCAAAATGGTCGCTGATACTCTTCTCTCTGATATCACCGACTCGGT 389 Query 359 TTTCGACCTTATTATGCTCCCTGGAGGACTTCCGGGCGGTGAGACTCTTAAGAATTGTAA 418 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 390 TTTCGACCTTATTATGCTCCCTGGAGGACTTCCTGGTGGTGAGACTCTTAAGAATTGTAA 449 Query 419 ACCTTTAGAGAAGATGGTGAAGAAGCAAGACACTGATGGACGACTTAACGCTGCTATCTG 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450 ACCTTTAGAGAAGATGGTGAAGAAGCAAGACACTGATGGACGACTTAACGCTGCTATCTG 509 Query 479 TTGTGCGCCTGCGTTGGCGCTTGGTACTTGGGGTCTACTAGAGGGTAAAAAAGCTACATG 538 ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct 510 TTGTGCGCCGGCGTTGGCGTTTGGTACTTGGGGACTACTAGAGGGTAAAAAAGCTACATG 569 Query 539 TTACCCGGTTTTTATGGAGAAACTAGCTGCTTGCGCGACAGCTGTTGAGTCAAGAGTGGA 598 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 570 TTACCCGGTTTTTATGGAGAAACTAGCGGCTTGTGCGACAGCTGTTGAGTCAAGAGTGGA 629 Query 599 AATTGATGGGAAGATAGTGACCAGTAGAGGGCCTGGAACTACCATGGAATTCTCTGTCAC 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 AATTGATGGGAAGATAGTGACCAGTAGAGGGCCTGGAACTACCATGGAATTCTCTGTCAC 689 Query 659 GCTTGTGGAGCAACTTCTTGGGAAAGAGAAAGCTGTTGAAGTCTCTGGCCCCTTGGTGAT 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 GCTTGTGGAGCAACTTCTTGGGAAAGAGAAAGCTGTTGAAGTCTCTGGCCCCTTGGTGAT 749 Query 719 GCGTCCCAACCCTGGTGATGAGTATACTATTACTGAGCTTAACCAAGTCAACTGGTCATT 778 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 750 GCGTCCCAACCCTGGTGATGAGTATACTATTACTGAGCTTAACCAAGTCAGCTGGTCATT 809 Query 779 CGACGGTACCCCACAGATTCTTGTACCCATTGCAGATGGCTCAGAGGAAATGGAAGCTGT 838 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 810 CGAGGGTACCCCACAGATTCTTGTACCCATTGCAGATGGCTCGGAGGAAATGGAAGCTGT 869 Query 839 TGCTATCATTGATGTCCTGAGGCGGGCAAAAGCAAATGTTGTCGTTGCTGCGCTTGGTAA 898 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 870 TGCTATCATTGATGTCCTGAAGCGGGCAAAAGCAAATGTTGTCGTAGCTGCGCTTGGTAA 929 Query 899 CAGTTTGGAAGTGGTAGCATCTCGGAAAGTCAAGCTGGTGGCAGATGTGCTTCTCGATGA 958 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 930 CAGTTTGGAAGTGGTAGCATCTCGGAAAGTCAAGCTGGTGGCAGATGTGCTTCTCGACGA 989 Query 959 GGCTGAAAAGAATTTGTACGATCTGATTGTGTTGCCTGGTGGTCTAGGTGGTGCTGAAGC 1018 |||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| Sbjct 990 GGCTGAAAAGAATTCGTACGATCTGATTGTGTTGCCTGGTGGTCTCGGCGGTGCTGAAGC 1049 Query 1019 ATTTGCAAGTTCGGAGAAGCTAGTGAATATGTTAAAGAAGCAGGCGGAATCAAACAAACC 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1050 ATTTGCAAGTTCGGAGAAGCTAGTGAATATGTTAAAGAAGCAGGCGGAATCAAACAAACC 1109 Query 1079 ATATGGAGCAATTTGTGCCTCTCCTGCTCTGGTGTTTGAGCCACATGGTTTACTCAAGGG 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1110 ATATGGAGCAATTTGTGCCTCTCCTGCTCTGGTGTTTGAGCCACATGGTTTACTCAAGGG 1169 Query 1139 TAAGAAGGCAACAGCGTTCCCAGCAATGTGCAGCAAACTGACGGACCAGAGTCACATCGA 1198 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1170 TAAGAAGGCAACAGCGTTTCCAGCAATGTGCAGCAAACTGACGGACCAGAGTCACATCGA 1229 Query 1199 GCATCGAGTCTTGGTGGACGGCAATCTCATAACAAGCAGGGGTCCAGGAACCTCATTGGA 1258 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1230 GCATCGAGTCTTGGTGGACGGCAATCTCATAACGAGCAGGGGTCCAGGAACCTCATTGGA 1289 Query 1259 GTTTGCGCTCGCAATTGTAGAGAAGTTTTACGGGCGTGAGAAAGGACTTCAGCTCGCAAA 1318 |||||| || |||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1290 GTTTGCACTTGCAATTGTAGAGAAGTTTTACGGGCGCGAGAAAGGACTTCAGCTCTCAAA 1349 Query 1319 GGCAACACTTGTGTAAAATCATGAGTATCTTAGGTA 1354 ||||||||||||||||| |||||||||||||||||| Sbjct 1350 GGCAACACTTGTGTAAACTCATGAGTATCTTAGGTA 1385 > AT3G14990.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr3:5047400-5049877 FORWARD LENGTH=1545 Length=1545 Score = 1027 bits (556), Expect = 0.0 Identities = 1012/1228 (82%), Gaps = 47/1228 (4%) Strand=Plus/Plus Query 131 TCGACGATC-CTTCTCT-ATCTCTGCAACTATGTCTTCATCTGCTAAGAA-GGTTTTGAT 187 ||||| ||| |||||| ||||| ||||||||| |||||| | | || || |||||||| Sbjct 81 TCGACCATCGTTTCTCTAATCTCCGCAACTATGGCTTCATTTACGAA-AACGGTTTTGA- 138 Query 188 TCCC-GTTGCGCATGGTACGGAGCCGT-TTGAAGCGGTGGTGATGATCGA-TGTGCTACG 244 |||| ||||||| ||||||||||| | | |||||||||| |||||| | ||| | || Sbjct 139 TCCCTATTGCGCACGGTACGGAGCC-TCTAGAAGCGGTGGCGATGAT-TACCGTGTTGCG 196 Query 245 GCGAGGCGGAGCGGATGTTACGGTGGCGTCCGTTGAGAATCAGGTCGGCGTTGATGCTTG 304 ||||| || || || || ||||||||||| ||||||| |||||| |||||||||||||| Sbjct 197 TCGAGGTGGTGCTGACGTGACGGTGGCGTCTGTTGAGACTCAGGTTGGCGTTGATGCTTG 256 Query 305 CCATGGAATCAAGATGGTCGCTGATACTCTTCTCTCTGAGATCACCGACTCCGTTTTCGA 364 ||||| |||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct 257 TCATGGCATCAAGATGGTCGCTGATACTCTTCTCTCTGATATTACCGACTCTGTTTTCGA 316 Query 365 CCTTATTATGCTCCCTGGAGGACTTCCGGGCGGTGAGACTCTTAAGAATTGTAAACCTTT 424 ||||||| ||||||| ||||| ||||| || || ||||||||||| || |||||| |||| Sbjct 317 CCTTATTGTGCTCCCCGGAGGGCTTCCCGGTGGCGAGACTCTTAAAAACTGTAAATCTTT 376 Query 425 AGAGAAGATGGTGAAGAAGCAAGACACTGATGGACGACTTAACGCTGCTATCTGTTGTGC 484 |||||| ||||| ||||| |||||| ||||||| ||||||||||| ||||| |||||||| Sbjct 377 AGAGAACATGGTCAAGAAACAAGACTCTGATGGCCGACTTAACGCAGCTATATGTTGTGC 436 Query 485 GCCTGCGTTGGCGCTTGGTACTTGGGGTCTACTAGAGGGTAAAAAAGCTACATGTTACCC 544 ||||| ||||| ||||||||||||||||||||||| || || ||||| || ||||||| Sbjct 437 TCCTGCCTTGGCTCTTGGTACTTGGGGTCTACTAGAAGGCAAGAAAGCAACGGGTTACCC 496 Query 545 GGTTTTTATGGAGAAACTAGCTGCT--T-GCGCGACAGCTGTTGAGTCAAGAGTGGAAAT 601 ||||||||||||||||| || ||| | | || || |||||||||||||||||| |||| Sbjct 497 TGTTTTTATGGAGAAACTTGCGGCTACTTGTGCAACTGCTGTTGAGTCAAGAGTGCAAAT 556 Query 602 TGATGGGAAGA-TAGTGACCAGTAGAGGGCCTGGAACTACCATGGAATTCTCTGTCACGC 660 |||||| |||| ||||||||||| | || || ||||| ||||| |||||||| |||||| Sbjct 557 TGATGG-AAGAATAGTGACCAGTCGTGGACCAGGAACCACCATTGAATTCTCCATCACGC 615 Query 661 TTGTGGAGCAACTTCTT-GGGAAAGAGAAAGCTGTTGAAGTCTCTGGCCCCTTGGTGATG 719 || | ||||| || || |||||||| ||||||| ||||||||| | |||| || | Sbjct 616 TTATAGAGCAG-TTGTTTGGGAAAGAAAAAGCTGATGAAGTCTCCAGTATCTTGCTGCTT 674 Query 720 CGTCCCAACCCTGGTGATGAGTATACTATTACTGAGCTTAACCAAGTCAA-CTGGTCATT 778 ||||| ||||||||||| |||| |||| ||||||||||||||||| ||| ||||||||| Sbjct 675 CGTCCTAACCCTGGTGAGGAGTTTACTTTTACTGAGCTTAACCAAA-CAAACTGGTCATT 733 Query 779 CGACGGTACCCCACAGATTCTTGTACCCATTGCAGATG-GCTCAGAGGAAATGGAAGCTG 837 || | ||| ||||||||||| |||||||||||||| | | ||||||||||| |||||| Sbjct 734 TGAAGATACACCACAGATTCTCGTACCCATTGCAGAGGAG-TCAGAGGAAATTGAAGCTA 792 Query 838 TTGCTATCATTGATGTCCTGAGGCGGGCAAAAGCAAATGTTGTCG-TTGCTGC-GCTTGG 895 | || | | ||| ||||||||||||||||||||||||| || | ||||||| | |||| Sbjct 793 TAGCGCTTGTAGATATCCTGAGGCGGGCAAAAGCAAATGTAGT-GATTGCTGCAG-TTGG 850 Query 896 TAACAGTTTGGAAGTGGTAGCATCTCGGAAAG-TCAAGCTGGTGGCAGATGTGCTTCTCG 954 ||||||||||||||| | || |||||| |||| | ||||| || ||||| || ||||| | Sbjct 851 TAACAGTTTGGAAGTTGAAGGATCTCGCAAAGCT-AAGCTAGTAGCAGAAGTTCTTCTTG 909 Query 955 ATGAGGCTGAAAAGAATTTGTACGATCTGATTGTGTTGCCTGGTGGTCT-AGGTGGTGCT 1013 |||||| || | |||| | || |||||||||||||| ||||| ||||| | |||||| Sbjct 910 ATGAGGTTGCAGAGAAGTCGTTTGATCTGATTGTGTTACCTGGCGGTCTTAAC-GGTGCT 968 Query 1014 GAA-GCATTTGCAAGTT-CGGAGAAGCTAGTGAATATGTTAAAGAAGCAGGCGGAATCAA 1071 || | ||| ||||| | || |||||||||| |||||||||| ||| ||||| ||| ||| Sbjct 969 CAAAG-ATTCGCAAGCTGCG-AGAAGCTAGTTAATATGTTAAGGAAACAGGCAGAAGCAA 1026 Query 1072 ACAAACCATATGGAGCAATTTGTGCCTCTCCTGCTCTG-GTGTTTGAGCC-ACATGGTTT 1129 ||||||||||||||| ||| || || || |||||| | || || ||||| | ||||||| Sbjct 1027 ACAAACCATATGGAGGAATCTGCGCATCGCCTGCT-TACGTCTTCGAGCCTA-ATGGTTT 1084 Query 1130 ACTCAAGGGTAAGAAGGCAAC-AGCGTT-CCCAGCAATGTGC-AGCAAACTGACGGACCA 1186 |||||||||||||||||| || | | | ||||| || || | |||||| ||||| | Sbjct 1085 ACTCAAGGGTAAGAAGGCTACTA-C-TCACCCAGTGGTGAGCGA-CAAACTTTCGGACAA 1141 Query 1187 GAGTCACATCGAGCATC-GAGTCTTGGTGGACGGCAATCTCATAACAAGCAGGGGTCCAG 1245 ||||||||| ||||| | ||||| |||| || || ||| ||||||||||||| | ||||| Sbjct 1142 GAGTCACATTGAGCA-CAGAGTCGTGGTAGATGGAAATGTCATAACAAGCAGAGCTCCAG 1200 Query 1246 GAACCT-CATTGGAGTTTGCGCTCGCAATTGTAGAGAAGTTTTACGGGCGTGAGAAAGGA 1304 | || | || |||||||| | || || ||||| || |||||||||||||| ||||||| Sbjct 1201 GGAC-TGCAATGGAGTTTTCACTTGCCATTGTCGAAAAGTTTTACGGGCGAGAGAAAGCT 1259 Query 1305 CTTCAGCTCGCAAAGGCAACACTTGTGT 1332 |||||||||| ||||||||||||||||| Sbjct 1260 CTTCAGCTCGGAAAGGCAACACTTGTGT 1287 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66666323760 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5