BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923933 Length=232 Score E Sequences producing significant alignments: (Bits) Value AT1G53708.1 | Symbols: RTFL9 | ROTUNDIFOLIA like 9 | chr1:20052... 285 1e-76 > AT1G53708.1 | Symbols: RTFL9 | ROTUNDIFOLIA like 9 | chr1:20052393-20053195 FORWARD LENGTH=630 Length=630 Score = 285 bits (154), Expect = 1e-76 Identities = 165/170 (97%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 1 ACC-AAAAAACCTTGGTTGTGGTAATGGCTGAGTTCAAGAGTAAGCTAAACAAAGGTCAC 59 ||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| Sbjct 114 ACCAAAAAAACCTTGATTGTTGTAATGGCTGAGTTCAAGAGTAAGTTAAACAAAGGTCAC 173 Query 60 GCCTTTACAAGCAAATGTGCTTCCTTGGTGAAGGAGCAACGAGCTCGTCTCTACATTCTT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 174 GCCTTTACAAGCAAATGTGCTTCCTTGGTGAAGGAGCAACGAGCTCGTCTCTACATTCTT 233 Query 120 CGTCGTTGCGCTACCATGCTTTGTTGCTGGTACATCCAAGGCGATGACTC 169 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 234 CGTCGTTGTGCTACCATGCTTTGTTGCTGGTACATCCAAGGCGATGACTC 283 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10455691792 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5