BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924096 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT1G55770.1 | Symbols: | Plant invertase/pectin methylesterase... 776 0.0 > AT1G55770.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:20851039-20851566 REVERSE LENGTH=528 Length=528 Score = 776 bits (420), Expect = 0.0 Identities = 497/533 (93%), Gaps = 10/533 (2%) Strand=Plus/Plus Query 21 ATGAAGCAATTC-GCCGGAGTCCTCTTCCTTTGCATCGTTCTTC-TCTCCTTCGTCGCCG 78 ||||||||| || |||||||| |||||||| |||||||||| || ||||||||||| ||| Sbjct 1 ATGAAGCAA-TCAGCCGGAGTTCTCTTCCTCTGCATCGTTC-TCATCTCCTTCGTCACCG 58 Query 79 GAAATGCTAATTCCGGTATGATATCCGATCTCTGCAAACACTCCGACGATCCAAAACTCT 138 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 59 GAAATGCTAATTCCGGTATGATATCCGATCTCTGCAAACACTCCGACGATCCAAACCTCT 118 Query 139 GTCTCTCCAGCATAACTTCACGTCCCGAGTCCGGCGAATTCGCAGGCACCAGCAGCCAGA 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 119 GTCTCTCCAGCATAACTTCACGTCCCGAGTCCGGCGAATTCGCAGGCACCAGCAACCAGA 178 Query 199 TCGAGATCATAGCTATCTCCGCGGCGTCAGCCAACGCCTCCGCCACTTCCTCCTATATCA 258 |||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| Sbjct 179 TCGAGATCATAGCTATCTCCGCCGCATCAGCCAACGCCTCCGCCACTTCCTCCTACATCA 238 Query 259 AGA-AAAAGCTCAGCAACGAAGATTTGGAGCCGGCGATTGAAGACACGCTTGAGGACTGT 317 | | ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 239 A-ACAAAAGCTCAGCAACGAAGATTTGGAGCCGGCTATTGAGGACACGCTTGAGGACTGT 297 Query 318 CAGAA-GAATTACCAAGATGCTGTGGAGCAGCTTGACGACTCGATCTCGGCCATGCTCGC 376 ||||| || |||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct 298 CAGAAAGA-TTACCAAGATGCCGTGGAGCAGCTAGATGACTCGATCTCCGCCATGCTCGC 356 Query 377 AGACGCACACGCTGATGTCGACGTCTGGCTGAGAGCGGCGATCAGCGCTATCGAGTCTTG 436 |||||||||| | || ||||| ||||||||||| |||||||||||||| |||||||| || Sbjct 357 AGACGCACACACCGACGTCGATGTCTGGCTGAGCGCGGCGATCAGCGCCATCGAGTCATG 416 Query 437 TGGAAGCGCGTTGGATTCACGCGCCGGGAACGATGCAGAGCTTTCCCAGAGGAAC-AAGG 495 ||||||||| |||| ||||||||| ||||| ||||| |||||||||||||||||| ||| Sbjct 417 TGGAAGCGCATTGGGTTCACGCGCTGGGAATGATGCTGAGCTTTCCCAGAGGAACGAAG- 475 Query 496 TCTTTCTCAAGCTGTGCAAAAACGCTTTGATGATTAACAAAATGTTAACTTGA 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 TCTTTCTCAAGCTGTGCAAAAACGCTTTGATGATTAACAAAATGTTAACTTGA 528 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5