BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg924120

Length=649
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G56010.2 | Symbols: NAC1, ANAC022 | NAC domain containing pr...   527    5e-149


> AT1G56010.2 | Symbols: NAC1, ANAC022 | NAC domain containing 
protein 1 | chr1:20946571-20949281 REVERSE LENGTH=1393
Length=1393

 Score =  527 bits (285),  Expect = 5e-149
 Identities = 325/344 (94%), Gaps = 3/344 (1%)
 Strand=Plus/Plus

Query  306   ATCATCAATGAGCACGTACCCTGCTTCTCCAATTTGTCACAGAACCAAACCTTGAACTCA  365
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct  792   ATCATCAATGAGCACGTACCCTGCTTCTCCAATTTGTCACAGAACCAAACCTTAAACTCG  851

Query  366   AACCAAACCTTGAACTCAGTCTCTGAACTCAAGATTCCATGCAAGAACCCTAACCCCTTG  425
             |||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  852   AACCTAACC---AACTCAGTCTCTGAACTCAAGATTCCATGCAAGAACCCTAACCCCTTG  908

Query  426   TTTACTGGTGGTTCAGCCCCAGCGACGCTCACAGGCCTCGACTCGTTCTGTTCTTCAGAT  485
             |||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||
Sbjct  909   TTTACTGGTGGTTCAGCCTCAGCCACGCTCACAGGCCTCGACTCATTCTGTTCTTCAGAT  968

Query  486   CAGATGGTTCTCAGAGCTCTACTCAGTCAGCTCACTAAGATCGACGGAAGCCTCGGGGCT  545
             ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||
Sbjct  969   CAGATGGTTCTCAGAGCTCTACTCAGTCAGCTCACTAAGATTGATGGAAGCCTCGGGCCT  1028

Query  546   AAAGAATCACAGAGTTATGGAGAAGGTAGCTCGGAGAGCCTGTTGACCGACATTGGTGTT  605
             |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||| ||
Sbjct  1029  AAAGAATCACAGAGTTATGGAGAAGGTAGCTCGGAGAGCCTCCTGACCGACATCGGTATT  1088

Query  606   CCAAGCAGTGCTTGGAATTGCTGATGATCGAGTGTAACCAGAGT  649
             ||||||| || ||||||||||||||||||||||||||| |||||
Sbjct  1089  CCAAGCACTGTTTGGAATTGCTGATGATCGAGTGTAACGAGAGT  1132



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 31346107728


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5