BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924130
Length=1543
Score E
Sequences producing significant alignments: (Bits) Value
AT1G55940.1 | Symbols: CYP708A1 | cytochrome P450, family 708, ... 1242 0.0
AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein |... 167 3e-40
AT1G78490.1 | Symbols: CYP708A3 | cytochrome P450, family 708, ... 148 1e-34
> AT1G55940.1 | Symbols: CYP708A1 | cytochrome P450, family 708,
subfamily A, polypeptide 1 | chr1:20922459-20925619 REVERSE
LENGTH=2052
Length=2052
Score = 1242 bits (672), Expect = 0.0
Identities = 781/830 (94%), Gaps = 21/830 (3%)
Strand=Plus/Plus
Query 708 AAGGCACGCAGAAATGTGATGAAGATGATAAAAAGAATGTTCAAAGAGAGGAGAGAAGAA 767
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1174 AAGGCACGCAGCAATGTGATGAAGATGCTAAAAAGAATGTTCAAAGAGAGGAGAGAAGAA 1233
Query 768 GGAACATCGGATGAATTAAAATATGGAGACTTCATGGAGACGATGATATATGAGGTGGAG 827
| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1234 GCAACATCGGATGACTCAAAATATGGAGACTTCATGGAGACAATGATATATGAGGTGGAG 1293
Query 828 AAAGAAGGCGATACGGTGAACGAGGAAAGATCTGTAGAGCTAATACTAAGTTTACTGATT 887
||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1294 AAAGAAGGCGATACGATCAACGAGGAAAGATCAGTAGAGCTAATACTTAGTTTACTGATT 1353
Query 888 GCGTCTTATGAAACTACTTCTACAATGACTGCACTAACTGTGAAATTCATAGCTGAAAAC 947
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1354 GCGTCTTATGAAACTACTTCTACTATGACTGCATTAACTGTGAAATTCATAGCTGAAAAC 1413
Query 948 CCCAAAGTGCTTATGGAGCTGAAGAGAGAGCATGAGACCATCCTCCATAACAGAGCTGAT 1007
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1414 CCCAAAGTGCTTATGGAGCTGAAGAGAGAACATGAGACCATCCTCCAAAACAGAGCTGAT 1473
Query 1008 AAAGAGTCTGGAGTTACTTGGAAAGAATATAGATCCATGATGACTTTCACCCATATGGTT 1067
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1474 AAAGAATCTGGAGTTACTTGGAAAGAATATAGATCCATGATGAATTTCACCCATATGGTT 1533
Query 1068 ATCAATGAGTCTCTTCGTTTAGGAAGTTTGTCACCTGCTATGTTTAGAAAGGTGGTGAGT 1127
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1534 ATCAATGAGTCTCTTCGTTTAGGAAGTTTGTCACCTGCTATGTTTAGAAAGGCGGTGAAT 1593
Query 1128 GATGTGGAGATCAAAGGCAAGTTTGAGTCTCTCTTTTGGTATACAATTCCAGCAGGATGG 1187
||||||||||||||||| || | | | |||||||||||||||||
Sbjct 1594 GATGTGGAGATCAAAGG---GT---A-T------------A--CAATTCCAGCAGGATGG 1632
Query 1188 ATTGTATTGGTTGTTCCATCTCTTCTTCATTATGACCCTCAAATCTATGAACAACCATGT 1247
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 ATTGTATTGGTGGTTCCATCTCTTCTTCATTATGACCCTCAAATCTATGAACAACCATGT 1692
Query 1248 GAGTTTAATCCATGGAGATGGGAGGGGAAGGAATTGCTTTGTGGCTCTAAAACGTTCATG 1307
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1693 GAGTTTAATCCATGGAGATGGGAGGGGAAAGAATTGCTTTCTGGCTCTAAAACGTTCATG 1752
Query 1308 GCGTTTGGTGGTGGTGCAAGACTATGTGCAGGAGCAGAGTTTGCTAGGCTTGGGATGGCT 1367
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1753 GCGTTTGGTGGTGGTGCAAGACTATGTGCAGGAGCAGAGTTTGCTAGGCTTCAGATGGCT 1812
Query 1368 ATATTTCTTCATCATCTAGTCACAACGTATGACTTGTCTTTGATCGATAAATCTTATATC 1427
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1813 ATATTTCTTCATCATCTAGTCACAACGTATGACTTCTCTTTGATCGATAAATCTTATATC 1872
Query 1428 ATTCGAGCACCCTTACTTCGATTCTCCAAGCCGATACGCATAACGATCTCCGAGAATCCT 1487
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1873 ATCCGAGCACCCTTACTTCGATTCTCCAAGCCGATACGCATAACGATCTCCGAGAATCCT 1932
Query 1488 TTAAGTTCATCCCATCAATATGCAAATCTTCTTTAGTATTGTGTTATGAA 1537
||||||||||| |||||| ||||||||||| |||||||||||||||||||
Sbjct 1933 TTAAGTTCATCTCATCAAAATGCAAATCTTTTTTAGTATTGTGTTATGAA 1982
Score = 1133 bits (613), Expect = 0.0
Identities = 671/700 (96%), Gaps = 0/700 (0%)
Strand=Plus/Plus
Query 9 GATATTAAGAAAGAAATGTGGGGTGTTGCACTGAGTGTTGTTATAGCTTTAGTGGTCGTC 68
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 427 GATATTATGAAAGAAATGTGGGGTGTTGCACTGAGTTTTGTTATAGCTTTAGTGGTCGTC 486
Query 69 AAGATCAGTCTCTGGCTCTATAGATGGGCTAACCCTAACTGCTCCGGCAAGCTACCTCCG 128
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 487 AAGATCAGTCTCTGGCTCTATAGATGGGCTAACCCTAACTGCTCCGGCAAACTACCTCCA 546
Query 129 GGTTCAATGGGGTTTCCGGTGATCGGAGAAACCATTGAGTTCTTCAAACCTTACAGTTTC 188
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 547 GGTTCAATGGGGTTTCCGGTGATCGGAGAAACCGTTGAGTTCTTCAAACCTTACAGTTTC 606
Query 189 GACGAAATCCATCCATTTGTCAAGAAAAGAATGTTCAAGCACGGTGGTTCGTTGTTCCGG 248
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 607 AACGAAATCCATCCATTTGTCAAGAAAAGAATGTTCAAGCACGGTGGTTCATTATTCCGG 666
Query 249 ACGAGTATCCTTGGCTCTAAAACGATTGTTTCGACAGACCCGGAAGTGAACTTTGAGATT 308
|||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 667 ACGAATATCCTCGGCTCTAAAACGATTGTTTCGACAGATCCGGAAGTGAACTTTGAGATT 726
Query 309 CTCAAACAAGACAACAGGGGTTTCATCATGAGCTATCCAGAAGCTCTTGTTAGAATCTTT 368
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 727 CTCAAACAAGAGAACAGGTGTTTCATCATGAGCTATCCAGAAGCTCTTGTTAGAATCTTT 786
Query 369 GGGAAAGATAACTTGTTCTTCAAGCAAGGAAAGGACTTCCACAGGTACATGAGACAGATT 428
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 787 GGGAAAGATAACTTGTTCTTCAAGCAAGGCAAGGACTTCCACAGGTACATGAGACATATT 846
Query 429 GCTCTGCAGCTTCTTGGCCCTGAACGTTTGAAGCAGAGATTTATACAACAAATCGACATA 488
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 847 GCTCTGCAGCTTCTTGGCCCTGAGTGTTTGAAGCAGAGATTTATACAACAAATCGACATA 906
Query 489 GCTACACGCGAGCATCTCAAATCTGTCTCCTTCCAAGGCGTTTTAGACGTCAAAGACACT 548
|| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 907 GCAACAAGCGAGCATCTCAAATCTGTCTCCTTCCAAGGCGTTGTAGACGTCAAAGATACT 966
Query 549 AGTGGAAGATTGATATTGGAACAAATGATCCAGATGATCATAAGTAACATCAAACCTGAG 608
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 967 AGTGGAAGATTGATATTGGAACAAATGATCCTGATGATCATAAGTAACATCAAACCTGAG 1026
Query 609 ACTAAGATCAAACTGATAGAAAGCTTTAGAGATTTCAGCTTCGACTTGGTTATGTCCCCT 668
||||||| |||||||||||| || ||||||||||||||||| || ||||||| |||||||
Sbjct 1027 ACTAAGAGCAAACTGATAGAGAGTTTTAGAGATTTCAGCTTTGATTTGGTTAGGTCCCCT 1086
Query 669 TTTGATCCTTCTTTTTGGAACGCTCTTTACAATGGACTTA 708
||||||||||||||||||||||||||||||||||| ||||
Sbjct 1087 TTTGATCCTTCTTTTTGGAACGCTCTTTACAATGGTCTTA 1126
> AT3G44970.1 | Symbols: | Cytochrome P450 superfamily protein
| chr3:16432443-16434848 FORWARD LENGTH=1440
Length=1440
Score = 167 bits (90), Expect = 3e-40
Identities = 361/485 (74%), Gaps = 45/485 (9%)
Strand=Plus/Plus
Query 925 CTGTGAAATTCATAGCT-GAAAACCCCAAAGTGCTTATGGAGCTGAAGAGAGAGCATGAG 983
||||||||||| || | |||||||| ||||| || ||| | |||| ||| ||||||
Sbjct 890 CTGTGAAATTCCTA-TTGGAAAACCCAAAAGTTCTCGCAGAGTTAAAGAAAGAACATGAG 948
Query 984 ACCATCCTCCATAA-CAGAGCTGATAAAG-AGTCTGGAGTTACTTGGAAAGAATATAGAT 1041
||||| | || ||||| || |||| || ||||||||||||| ||||||| |||
Sbjct 949 GTGATCCTTGA-AAGCAGAGAAGACAAAGAAG-GTGGAGTTACTTGGGAAGAATACAGA- 1005
Query 1042 C-CATGATGACTTTCACCCATATGGTTATCAATGAGTCTCTTCGTTTAGGAAGTTTGTCA 1100
| || ||||||||||||| | ||||||||||||||||||||||| || || ||| |
Sbjct 1006 CACAAGATGACTTTCACCAACATGGTTATCAATGAGTCTCTTCGAATAACAAACTTGGCT 1065
Query 1101 CC--TGCTATGTTTAGAAAGGTGGT-GAGTGATGTGGAGATCAAAGGCAAGTTTGAGTCT 1157
|| || | | |||||||| | ||| || |||||||| |||||||| | | |
Sbjct 1066 CCTATG-T-TATTTAGAAAAGCGGTAAAG-GATGTGGAAATCAAAGG--A---T-A---- 1112
Query 1158 CTCTTTTGGTATACAATTCCAGCAGGATGGATTGT-ATTGGTTGTTCCATCTCTTCTTCA 1216
| || ||||||||||| ||||| || | || || | || || | ||||
Sbjct 1113 --C---------ACCATTCCAGCAGGTTGGATAGTGA-TGATTATACCTTCAGTGGTTCA 1160
Query 1217 TTATGACCCTCAAATCTATGAACAA-CCATGTGAGTTTAATCCATGGAGATGGGAGGGGA 1275
|| ||| ||| ||||||||||| || || | |||||||||||||||||||||||||||||
Sbjct 1161 TTTTGATCCTGAAATCTATGAA-AACCCTTTTGAGTTTAATCCATGGAGATGGGAGGGGA 1219
Query 1276 AGGAATTGCTTTG-TGGCTCTAAAACGTTCATGGCGTTTGGTGGTGGTGCA-AGACTATG 1333
| || |||| | ||| |||||||||||||||| |||||| || | |||| |||
Sbjct 1220 AAGAGTTGCGG-GCTGGATCTAAAACGTTCATGGTGTTTGGAACCGGA-CTTAGACAATG 1277
Query 1334 TGCAGGAGCAGAGTTTGCTAGGCTTGGGATGGCTA-TATTTCTTCATCATCTAGTCACAA 1392
|| || |||||||||||||||||| ||| | | |||||||||||||||| || || |
Sbjct 1278 CGCTGGTGCAGAGTTTGCTAGGCTTCAGATTTC-AGTATTTCTTCATCATCTTGTTACCA 1336
Query 1393 CGTAT 1397
| |||
Sbjct 1337 CTTAT 1341
> AT1G78490.1 | Symbols: CYP708A3 | cytochrome P450, family 708,
subfamily A, polypeptide 3 | chr1:29528253-29530665 FORWARD
LENGTH=1810
Length=1810
Score = 148 bits (80), Expect = 1e-34
Identities = 178/224 (79%), Gaps = 12/224 (5%)
Strand=Plus/Plus
Query 1167 TATACAATTCCAGCAGGATGGATTGTATTGGTTGTTCCATCTCTTC--TTCATTATGACC 1224
||||||||||| || || |||||||| ||||| || | || | |||||| ||| |
Sbjct 1207 TATACAATTCCGGCTGGTTGGATTGTGGCGGTTGCACC-T-TCAGCGGTTCATTTTGATC 1264
Query 1225 CT-CAAATCTATGAACAA-CCATGTGAGTTTAATCCATGGAGATGGGAGGGGAAGGAATT 1282
|| | |||||||| | || |||| |||||||||||||||||||||||||||||| ||| |
Sbjct 1265 CTGC-AATCTATG-AGAACCCATTTGAGTTTAATCCATGGAGATGGGAGGGGAAAGAAAT 1322
Query 1283 GCTTTGTGGCTCTAAAACGTTCATGGCGTTTGG-TGGTGGTGCAAGACTATGTGCAGGAG 1341
| |||| || ||||||||||||||||||||||| | ||| | ||||| |||| ||| |
Sbjct 1323 GATTTGGGGATCTAAAACGTTCATGGCGTTTGGATA-TGGAGTTAGACTTTGTGTAGGTG 1381
Query 1342 CAGAGTTTGCTA-GGCTTGGGATGGCTATATTTCTTCATCATCT 1384
|||||||| | | ||||| ||||| || || || ||||||||
Sbjct 1382 CAGAGTTTTC-ACGGCTTCAAATGGCAATCTTCCTCCATCATCT 1424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76154226765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5