BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924146 Length=1262 Score E Sequences producing significant alignments: (Bits) Value AT1G53720.1 | Symbols: ATCYP59, CYP59 | cyclophilin 59 | chr1:2... 431 9e-120 > AT1G53720.1 | Symbols: ATCYP59, CYP59 | cyclophilin 59 | chr1:20056533-20059638 FORWARD LENGTH=1770 Length=1770 Score = 431 bits (233), Expect = 9e-120 Identities = 291/319 (91%), Gaps = 3/319 (1%) Strand=Plus/Plus Query 19 ATAAATGTCCTTTGACCTGCAACAACTTTCTCAAGCTCTGCAAGATCAAGTACTACAAT- 77 ||||||| |||||||| ||||| ||||| || ||||| ||||||||||||||||||||| Sbjct 175 ATAAATGCCCTTTGACTTGCAAGAACTTCCTTAAGCTTTGCAAGATCAAGTACTACAATG 234 Query 78 GGTGCCTCTTCCACACTGTGCAAAATGATTTCACAGCACAGACGGGTGATCCAACTGCCA 137 |||| || || |||||||||||||| ||||||||||||||||| ||||||||||||| | Sbjct 235 GGTGTCTTTTTCACACTGTGCAAAAGGATTTCACAGCACAGACTGGTGATCCAACTGGTA 294 Query 138 CAGGAGCTGGTGGAGATTCAATCTACAAATTTCTGTACGGTGAGCAGGCTCGGTTTTTTG 197 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 295 CGGGAGCTGGTGGAGATTCAATCTACAAATTTCTGTACGGTGAGCAGGCTCG-TTTTTAC 353 Query 198 GC-GATGAGATTCATCTCGATTTAAAACATTCAAAGACTGGCATTGTTGCAATGGCCAAT 256 |||||||||||||| |||||||||||||||||||| |||| |||||||||||||| | Sbjct 354 AAAGATGAGATTCATCTTGATTTAAAACATTCAAAGACCGGCACTGTTGCAATGGCCAGT 413 Query 257 GGTGGAGAAAATCTGAATGCTTCCCAGTTCTATTTCACACTTCGTGATGATCTGGACTAT 316 |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 414 GGTGGAGAGAATCTCAATGCTTCCCAGTTCTATTTCACACTTCGTGATGATTTGGACTAT 473 Query 317 CTTGATGGGAAACACACTG 335 ||||||||||||||||||| Sbjct 474 CTTGATGGGAAACACACTG 492 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62047873620 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5