BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924152
Length=2743
Score E
Sequences producing significant alignments: (Bits) Value
AT1G56140.1 | Symbols: | Leucine-rich repeat transmembrane pro... 1847 0.0
AT1G56130.1 | Symbols: | Leucine-rich repeat transmembrane pro... 1808 0.0
AT1G56120.1 | Symbols: | Leucine-rich repeat transmembrane pro... 1520 0.0
AT1G56145.2 | Symbols: | Leucine-rich repeat transmembrane pro... 732 0.0
> AT1G56140.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:21001574-21007809 REVERSE LENGTH=3320
Length=3320
Score = 1847 bits (1000), Expect = 0.0
Identities = 1319/1470 (90%), Gaps = 33/1470 (2%)
Strand=Plus/Plus
Query 850 TAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTAATATTGGAGAATACTCAA 909
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 968 TAGTATTGAGGAACAATAATCTCACTGGGACAATACCGTCTAATATTGGAGAATATTCAA 1027
Query 910 GTTTGCGACAAGTTGATTTGAGCTTCAACAAACTACATGGACCAATTCCGGCTTCACTTT 969
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1028 GTTTGCGACAACTTGATTTGAGCTTCAACAAACTACATGGAACAATTCCGGCTTCACTTT 1087
Query 970 TCAACTTAAGTCAACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTTGC 1029
|||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1088 TCAACTTAAGACAGCTTACTCACTTGTTTCTGGGGAACAACACGTTGAATGGCTCATTGC 1147
Query 1030 CCACTCAAAAGAGGCAGTCTCTGATCAATATAGATGTGTCGTACAATGATTTGTCTGGAA 1089
||||||||||| |||||||||||| |||| |||||||||| |||||||||||||||||||
Sbjct 1148 CCACTCAAAAGGGGCAGTCTCTGAGCAATGTAGATGTGTCATACAATGATTTGTCTGGAA 1207
Query 1090 GTCTTCCTTTATGGGTCAGTTTACCAAACTTGAAACTCAATC-TAGTAGCTAACAATTTC 1148
||||||| | |||||||||||||||||||||||| ||||| | |||| |||||||| |||
Sbjct 1208 GTCTTCCGTCATGGGTCAGTTTACCAAACTTGAATCTCAA-CTTAGTTGCTAACAACTTC 1266
Query 1149 ACATTGGAAGGTCTTGACAACAGTGTTTTATCAGGACTGAACTGCCTGCAGAAGAATTTC 1208
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1267 ACATTGGAAGGTCTTGACAACAGGGTTTTATCAGGACTGAACTGCCTGCAGAAGAACTTC 1326
Query 1209 GCC-TGCAATCGCGGCAAAGGAATCTATTATAACTTTTCGATTAATTGCGGAGGCCCAGA 1267
|| |||||||| || |||||||| |||| | |||| || || || ||||||||||||||
Sbjct 1327 -CCATGCAATCGAGGGAAAGGAATATATTCTGACTTCTCAATCAACTGCGGAGGCCCAGA 1385
Query 1268 GATAAGGTCTGCT-AGTGGAGCACTATATGAGAAAGAGGAC-ATGGATCTTGGACCAGCT 1325
|||||| |||| | | || |||| ||| ||||| |||||| | ||||||||||||||||
Sbjct 1386 GATAAGATCTG-TAACTGAAGCAGTATTTGAGAGGGAGGACGA-GGATCTTGGACCAGCT 1443
Query 1326 TCGTTTGTCGTGAGTGCTGCTCAGAGATGGGCAGCCAGTAGTGTAGGAAATTTTGCCGGA 1385
|| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 1444 TCATTTGTCGTGAGTGCTGGTCAGAGATGGGCAGCCAGTAGTGTAGGACTTTTTGCCGGA 1503
Query 1386 AGTAGCAGA-AATAAATATAGAGAGACTTCACAATCACAATTTATCAACACTTTGGACTC 1444
||||||| | |||| ||| | | |||||||||||||||||| ||||||||||||||||
Sbjct 1504 AGTAGCA-ACAATATATACATATCTACTTCACAATCACAATTTGTCAACACTTTGGACTC 1562
Query 1445 GGAGCTTTTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTATTATGGGTTGGGGCT 1504
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1563 AGAGCTATTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTATTATGGGTTGGGTCT 1622
Query 1505 TGAAAATGGAGGCTACACCGTTACACTTCAGTTTGCTGAAATACAAATTCAAGG-T-T-C 1561
|||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | | |
Sbjct 1623 AGAAAATGGAGGCTATACCGTCACACTTCAGTTTGCTGAAATACAAATTCTAGGTTCTAC 1682
Query 1562 -T--AACTCTTGGAAAGGTATT-GGAAGACGACGTTTTGACATTTATGTCCAGGGAAGAC 1617
| ||| |||||| |||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1683 TTCCAACACTTGGAGAGGT-TTAGGAAGACGACGTTTTGACATTTATGTCCAGGGAAGAC 1741
Query 1618 TTGTTGAAAAGGATTTTGATATACGCAGAACAGCTGGTGGGTCTTCGGTTCGAGCAGTTC 1677
||||||||||||| || ||| |||||||||||||||||| || | |||||||||||||
Sbjct 1742 TTGTTGAAAAGGACTTCGATGTACGCAGAACAGCTGGTGACTCCACTGTTCGAGCAGTTC 1801
Query 1678 AGAGAGAATATAAAACAAATGTATCAGAAAATCATCTTGAAGTTCATCTTTTCTGGGCTG 1737
|||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||
Sbjct 1802 AGAGAGAATATAAAGCAAATGTATCACAAAATCATCTCGAAATTCATCTTTTCTGGGCTG 1861
Query 1738 GAAAAGGAACATGCTGTATTCCTATCCAAGGGGCTTATGGGCCATTAATATCGGCCATCA 1797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1862 GAAAAGGAACATGCTGTATTCCTATCCAAGGGGCTTATGGGCCATTAATATCGGCCGTCG 1921
Query 1798 GTGCAACACCAGATTTCACACCAACTGTGGCTAATAGGCCACCATCAAAGGAAAAGAACA 1857
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 1922 GTGCAACACCAGATTTCACACCAACTGTGGGTAATAGGCCACCATCAAAGGGAAAGAGCA 1981
Query 1858 TGACTGGTACTATTGTGGGTGTCATTGTTGCCGTAGGACTCTTGAGCATC-TTAGCGGGT 1916
|||||||||||||||||||||||||||||| ||| ||||| ||||||||| || | |||
Sbjct 1982 TGACTGGTACTATTGTGGGTGTCATTGTTGGCGTTGGACTTTTGAGCATCATTT-CTGGT 2040
Query 1917 GTGGTTATCTTCATCATCCTAAAAAGTAGAAAGCCGTACACAGATGATGAAGAGATACTT 1976
||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct 2041 GTGGTTATCTTTATCATCCGAAAAAGAAGAAAGCGGTACACAGATGATGAAGAGATACTT 2100
Query 1977 AGTATGGACGTAAAGCCTTACACCTTTACTTACTCA-ATACTTAAAAGTGCAACACAAGA 2035
||||||||||| |||||||||||||| |||||||| | ||||||||||||||| |||||
Sbjct 2101 AGTATGGACGTTAAGCCTTACACCTTCACTTACTCGGA-ACTTAAAAGTGCAACTCAAGA 2159
Query 2036 TTTCGATCCCTCAAACAAGCTTGGAGAGGGAGCG-TTTGGGGTTGTTTATAAGGGATCCC 2094
||| |||||||||||||||||||||||||||| | ||||| ||||||||||||| |
Sbjct 2160 TTTTGATCCCTCAAACAAGCTTGGAGAGGGAG-GATTTGGCCCTGTTTATAAGGGAAAAC 2218
Query 2095 TCAATGATGGAAGAGAGATCGCAGTGAAGA-AGCTGTCAACGGTTGGATCACGGCACGGG 2153
||||||||||||||||| | ||||||||| | |||| ||| ||||| || || |||
Sbjct 2219 TCAATGATGGAAGAGAGGTAGCAGTGAAGCTAT-TGTC---GGTGGGATCCCGACAAGGG 2274
Query 2154 AAGGGTCAATTTGTTGCAGAAATTGTAGCAATTTCTTCAGTTCTGCATCGTAACCTAGTA 2213
||||| |||||||||||||||||||||||||||||| |||| | ||||| ||| |||||
Sbjct 2275 AAGGGACAATTTGTTGCAGAAATTGTAGCAATTTCTGCAGTCCAACATCGCAACTTAGTA 2334
Query 2214 AAACTTTACGGGTGCTGCTTTGAAGGAGATCAGCGTTTGCTCGTATATGAGTATCTCTC- 2272
|||||||| |||||||||| ||||||||| || |||||||| |||||||| || || ||
Sbjct 2335 AAACTTTATGGGTGCTGCTATGAAGGAGAGCATCGTTTGCTTGTATATGAATACCT-TCC 2393
Query 2273 TAATGGAAGTCTCGATGACGCAT-TATTTG 2301
||| |||||||| ||| | || | ||||||
Sbjct 2394 TAACGGAAGTCTTGATCAGGC-TCTATTTG 2422
Score = 664 bits (359), Expect = 0.0
Identities = 686/838 (82%), Gaps = 46/838 (5%)
Strand=Plus/Plus
Query 20 GATGCTCAGGCTACGGAGATCTCTGTTTCTGCTCCTAACCGTCTGGTTCTTGTATAGTTC 79
||||||||||||| || | | ||||| ||| ||||| || ||||||||||||| || ||
Sbjct 84 GATGCTCAGGCTATGGCGGTATCTGTGTCTACTCCTCACTGTCTGGTTCTTGTGTAATTT 143
Query 80 CGGTTCGGTTCACGTGGTGGTTCGAGCCCAAAA-CCAAAACGGAGCCACTACTCATCCCG 138
|||| ||||| || ||||||||||| ||||| | || | |||||||| || |||||||
Sbjct 144 CGGTCCGGTTTAC---GTGGTTCGAGCTCAAAATCGAACA-GGAGCCACCACACATCCCG 199
Query 139 ACGAAGTGATTGTGGAAACAACAGCGCGAGCTTTGAACTCAATCTTCGCGACTTGGAAGA 198
|| | | ||||| ||||||||||||||| |||||| |||||| ||
Sbjct 200 AC------------G-----A-AGCGCTAGCTTTGAACTCAATTTTCGCGGCTTGGAGGA 241
Query 199 TCCAAGCGCCCAAGGAATGGAACATCAGCGGCGAACTTTGCTCCGGCGCCGCCATCAACG 258
| | ||||| | ||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 242 TTCGGGCGCCGAGGGAATGGAACATCAGCGGCGAACTTTGCTCCGGCGCCGCTATCGACG 301
Query 259 --A-TG-TCACCA-TCGACGACAAGGACC-ACAACCCTCTAATAAAATGCGGCTGTACTT 312
| || || | | || | || | || |||| ||||| || ||||||| ||| | ||
Sbjct 302 CCAGTGTTCTCGACTC-A-AACCCTG-CCTACAATCCTCTCATCAAATGCGACTGCAGTT 358
Query 313 TCGTCAACTCCACAATCTGCCGCATCACCGCCCTAAAGGTTTATGCGA-GAGATGTTGTA 371
||| |||||||||||||||||||| ||| | | ||||||||||||| | || ||||||
Sbjct 359 TCGAAAACTCCACAATCTGCCGCATTACCAACATCAAGGTTTATGCGATG-GAAGTTGTA 417
Query 372 GGACCTATACCTCAAGAGCTCTGGA-CTTTGATATTCCTCACCAATCTGAACCTGGCTCA 430
||| ||||||||||| | ||||||| ||| || || ||| || ||||||||| ||| |||
Sbjct 418 GGATCTATACCTCAACAACTCTGGACCTTGGA-ATACCTGACAAATCTGAACTTGGGTCA 476
Query 431 AAATTTTCTGACAGGCTCACTGCCTCCTGCAATTGGGAATTTGACTCTAATGCAG-TGGA 489
|||| |||| || |||||||| ||||||||| |||| |||||||||| ||||| | ||||
Sbjct 477 AAATGTTCTCACTGGCTCACTTCCTCCTGCACTTGGAAATTTGACTCGAATGC-GATGGA 535
Query 490 TGACTTTTGGGATCAATGCCTTGTCTGGCCCTGTTCCTAAGGAAATTGG-TCGCCTCACA 548
||||||||||||||||||| |||||||||||| ||||||| ||||| || | | || |||
Sbjct 536 TGACTTTTGGGATCAATGCGTTGTCTGGCCCTATTCCTAAAGAAATCGGTTTG-CTTACA 594
Query 549 GATTTACGATCACTTAGTATTGGTTCAAATAACTTTTCCGGTTCTATACCTGCTGAGATC 608
|||||| ||| |||||||||| |||||||||||||||| ||||||||||| | ||||||
Sbjct 595 GATTTAAGATTACTTAGTATTAGTTCAAATAACTTTTCGGGTTCTATACCAGATGAGATT 654
Query 609 GGGA-ATTGTACAAAACTACAGCAAATATACATAGGTAGTTCTGGACTCAATGGGGAAAT 667
|||| | |||||||||||||| || |||||||||| |||||| ||||||| |||| | |
Sbjct 655 GGGAGA-TGTACAAAACTACAACAGATATACATAGATAGTTCGGGACTCAGCGGGGGATT 713
Query 668 ACCTTTATCCTTGGCTAATCTTGTGGAGCT-G-ACTGTCGCTTGGATTATGGATCTTGAA 725
|||| |||| || ||||||||||||||||| | || ||||||||| |||| | |||
Sbjct 714 ACCTGTATCATTTGCTAATCTTGTGGAGCTGGAAC--AAGCTTGGATTGCGGATATGGAA 771
Query 726 GTTACTGGTCGGATACCAGACTTTATAGGAAATTGGACCAAACTTACTACCTTGAGAATT 785
|||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 772 CTTACAGGTCAGATACCAGACTTTATAGGAGATTGGACCAAACTTACTACCTTGAGAATT 831
Query 786 ATGGGAACTGGTTTGAGTGGTCCGATACCGTCGTCATTTTCCAACTTAGCTTCTATGA 843
| ||||||||||||||||||||||||||| |||| ||||| |||||| ||||| |||
Sbjct 832 CTTGGAACTGGTTTGAGTGGTCCGATACCGGCGTCGTTTTCAAACTTAACTTCTTTGA 889
Score = 331 bits (179), Expect = 2e-89
Identities = 372/460 (81%), Gaps = 33/460 (7%)
Strand=Plus/Plus
Query 2301 GTGAGTGGAAGGAAAAACTCTGATGAAAACCTGGAGGAGGGaaaaaa-aTATCTTCTTGA 2359
|||||||||||| |||||||||||| ||| ||||||| ||||||| ||||||||||||
Sbjct 2743 GTGAGTGGAAGGCCAAACTCTGATGAGAACTTGGAGGA-TGAAAAAAGATATCTTCTTGA 2801
Query 2360 ATGGGCATGGAATCTACACGAGAAAAGCCGTGACGTTGAACTAATTGATGATGAGCT-AG 2418
||||||||||||||||||||||||| ||||||| |||||||| |||||| || |||| |
Sbjct 2802 ATGGGCATGGAATCTACACGAGAAAGGCCGTGAAGTTGAACTTATTGATCATCAGCTGAC 2861
Query 2419 GTGAATACAACATGGAAGAAGTGAAACGCATGATTGGCGTTGCTCTGCTTTGCACTCAGT 2478
||||| |||||||||||||| |||||||||||||||| | || ||||| || || ||
Sbjct 2862 -TGAATTCAACATGGAAGAAGGGAAACGCATGATTGGCATAGCCCTGCTGTGTACACAAA 2920
Query 2479 CGTCTCATGCGTTGAGACCACCAATGTCACGCGTGGTAGCCATG-TTGTCAGGAGATGCT 2537
| |||||||| |||||||||||||||||||| ||||| |||||| || |||||||||| |
Sbjct 2921 CATCTCATGCCTTGAGACCACCAATGTCACGAGTGGTGGCCATGCTT-TCAGGAGATGTT 2979
Query 2538 GAGGTCAATGATGCCACCTCGAAGCCAGGCCATCTAATCGACAGTATATATGATGACACC 2597
||||||| ||||| ||| || ||||||||| | |||| |||| | | || ||||||||||
Sbjct 2980 GAGGTCAGTGATGTCACTTCAAAGCCAGGCTACCTAACCGACTGGAGATTTGATGACACC 3039
Query 2598 ACAAGC-TCCTCT-TACAGTGGCTTTC-A--AACCAAAGACACAAGCTTCTCAA-C---- 2647
||| || ||||| | ||| ||||||| | || ||| ||||| |||||| || |
Sbjct 3040 ACA-GCCTCCTCAAT-CAGCGGCTTTCCATTAAG-AAACACACAGGCTTCTGAATCCTTC 3096
Query 2648 --GAGCTTTGTGACGCCTGGC-CCAAGAGA-CAGCGA----CA--G----TAAGCCAATG 2693
|||||||||| ||||| | || ||| | || ||| || | || |||||||
Sbjct 3097 ACGAGCTTTGTGGCGCCTAGATCCGAGATATCACCGAGAAACAACGACGCTAGGCCAATG 3156
Query 2694 CTTGGATTCAAGATCAAGGAGGGAAGATGACAAAGACCCT 2733
|||||| | |||| || ||||||||||||||||||||||
Sbjct 3157 CTTGGAGCCCAGATGAATGAGGGAAGATGACAAAGACCCT 3196
> AT1G56130.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:20994931-21000887 REVERSE LENGTH=3099
Length=3099
Score = 1808 bits (979), Expect = 0.0
Identities = 1312/1470 (89%), Gaps = 33/1470 (2%)
Strand=Plus/Plus
Query 850 TAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTAATATTGGAGAATACTCAA 909
|||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 887 TAGTTTTGAGGAACAACAATCTCACTGGGACAATACCGTCTACTATTGGAGAACACTCAA 946
Query 910 GTTTGCGACAAGTTGATTTGAGCTTCAACAAACTACATGGACCAATTCCGGCTTCACTTT 969
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 947 GTTTGCGACAAGTTGATTTAAGCTTCAACAAACTACATGGACCAATTCCGGCTTCACTTT 1006
Query 970 TCAACTTAAGTCAACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTTGC 1029
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1007 TCAACTTAAGTCAGCTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTTTC 1066
Query 1030 CCACTCAAAAGAGGCAGTCTCTGATCAATATAGATGTGTCGTACAATGATTTGTCTGGAA 1089
|||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1067 CCACTCAAAAGACGCAGTCTCTGAGAAATGTAGATGTGTCGTACAATGATTTGTCTGGAA 1126
Query 1090 GTCTTCCTTTATGGGTCAGTTTACCAAACTTGAAACTCAATCTAGTAGCTAACAATTTCA 1149
||||||||| ||||||||| ||||||| |||||||||||| ||||| |||||||| ||||
Sbjct 1127 GTCTTCCTTCATGGGTCAGCTTACCAAGCTTGAAACTCAACCTAGTTGCTAACAACTTCA 1186
Query 1150 CATTGGAAGGTCTTGACAACAGTGTTTTATCAGGACTGAACTGCCTGCAGAAGAATTTCG 1209
|||| ||||||||||||||||| |||||| |||||||||||||||||||||| || |||
Sbjct 1187 CATTAGAAGGTCTTGACAACAGGGTTTTACCAGGACTGAACTGCCTGCAGAAAAACTTCC 1246
Query 1210 CCTGCAATCGCGGCAAAGGAATCTATTATAACTTTTCGATTAATTGCGGAGGCCCAGAGA 1269
|||||||||| |||||||||||||||| | ||||||| || || ||||||||||||||||
Sbjct 1247 CCTGCAATCGAGGCAAAGGAATCTATTCTGACTTTTCAATCAACTGCGGAGGCCCAGAGA 1306
Query 1270 TAAGGTCTGCTAG-TGGAGCACTATATGAGAAAGAGGAC-ATGGATCTTGGACCAGCTTC 1327
||| |||| || ||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct 1307 AAAGATCTG-TAACTGGAGCACTATTTGAGAGGGAGGATGA-GGATTTTGGACCAGCTTC 1364
Query 1328 GTTTGTCGTGAGTGCTGCTCAGAGATGGGCAGCCAGTAGTGTAGGAAATTTTGCCGGAAG 1387
||| |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||
Sbjct 1365 ATTTTTCGTGAGTGCTGGTCAGAGATGGGCAGCTAGTAGTGTAGGACTTTTTGCCGGAAG 1424
Query 1388 TAGCAGA-AATAAATATAGAGAGACTTCACAATCACAATTTATCAACACTTTGGACTCGG 1446
||||| | |||| ||| | || |||||||||||||||||| |||||||||||||||| |
Sbjct 1425 TAGCA-ACAATATATACATAGCTACTTCACAATCACAATTTGTCAACACTTTGGACTCAG 1483
Query 1447 AGCTTTTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTATTATGGGTTGGGGCTTG 1506
|||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1484 AGCTATTTCAATCAGCAAGACTTTCTGCATCTTCCGTAAGGTATTATGGGTTGGGGCTAG 1543
Query 1507 AAAATGGAGGCTACACCGTTACACTTCAGTTTGCTGAAATACAAATTCAAGGTTCTAA-- 1564
|||||||||| || || || || ||||||||||||||||||||||||| ||||||||
Sbjct 1544 AAAATGGAGGATATACAGTAACCCTTCAGTTTGCTGAAATACAAATTCTAGGTTCTACTT 1603
Query 1565 CT-C---TTGGAAAGGTATTGGAA-GACGACGTTTTGACATTTATGTCCAGGGAAGACTT 1619
|| | |||||||||| |||| | |||||||||||||||||||||||||||||||||||
Sbjct 1604 CTACCACTTGGAAAGGT-TTGGGACGACGACGTTTTGACATTTATGTCCAGGGAAGACTT 1662
Query 1620 GTTGAAAAGGATTTTGATATACGCAGAACAGCTGGTGGGTCTTCGGTTCGAGCAGTTCAG 1679
|||||||||||||||||| |||| ||||||||||||| ||| | ||| |||||||||||
Sbjct 1663 GTTGAAAAGGATTTTGATGTACGTAGAACAGCTGGTGACTCTACTGTTAGAGCAGTTCAG 1722
Query 1680 AGAGAATATAAAACAAATGTATCAGAAAATCATCTTGAAGTTCATCTTTTCTGGGCTGGA 1739
|||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1723 AGAGTATATAAGGCAAATGTATCAGAAAATCACCTCGAAGTTCATCTTTTCTGGGCTGGG 1782
Query 1740 AAAGGAACATGCTGTATTCCTATCCAAGGGGCTTATGGGCCATTAATATCGGCCA-TCAG 1798
||||||||||| ||||| |||||||||||||||||||| ||||||||||| || | ||||
Sbjct 1783 AAAGGAACATGTTGTATACCTATCCAAGGGGCTTATGGACCATTAATATCAGC-AGTCAG 1841
Query 1799 TGCAACACCAGATTTCACACCAACTGTGGCTAATAGGCCACCATCAAA-GGAAAAGAACA 1857
|||||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||
Sbjct 1842 TGCAACACCAGATTTCACACCAACTGTGGCGAATAAGCCACCATCAAAAGGAAA-GAACA 1900
Query 1858 TGACTGGTACTATTGTGGGTGTCATTGTTGCCGTAGGACTCTTGAGCATC-TTAGCGGGT 1916
|||||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||
Sbjct 1901 GGACTGGTACTATTGTGGGCGTCATTGTTGGCGTAGGACTTTTGAGCATCCTT-GCGGGT 1959
Query 1917 GTGGTTATCTTCA-TCATCCTAAAAAGTAGAAAGCCGTACACAGATGATGAAGAGATACT 1975
||||| || || | | |||| |||||| ||||| | ||||||||||||||||||| ||||
Sbjct 1960 GTGGTCATGTTTACT-ATCCGAAAAAGAAGAAAACGGTACACAGATGATGAAGAGCTACT 2018
Query 1976 TAGTATGGACGTAAAGCCTTACACCTTTACTTACTCA-ATACTTAAAAGTGCAACACAAG 2034
| ||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||
Sbjct 2019 TGGTATGGACGTAAAGCCTTACATCTTTACTTATTCGGA-ACTTAAAAGTGCAACTCAAG 2077
Query 2035 ATTTCGATCCCTCAAACAAGCTTGGAGAGGGAGCG-TTTGGGGTTGTTTATAAGGGATCC 2093
|||| |||||||||||||||||||||||||| | | |||||| ||||||||||||| |
Sbjct 2078 ATTTTGATCCCTCAAACAAGCTTGGAGAGGGGG-GATTTGGGCCTGTTTATAAGGGAAAC 2136
Query 2094 CTCAATGATGGAAGAGAGATCGCAGTGAAGA-AGCTGTCAACGGTTGGATCACGGCACGG 2152
|| ||||||||||||| | |||| |||||| | |||| ||| ||||| || || ||
Sbjct 2137 CTTAATGATGGAAGAGTGGTCGCGGTGAAGCTAT-TGTC---GGTGGGATCCCGTCAAGG 2192
Query 2153 GAAGGGTCAATTTGTTGCAGAAATTGTAGCAATTTCTTCAGTTCTGCATCGTAACCTAGT 2212
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2193 GAAGGGACAATTTGTTGCAGAAATTGTAGCAATTTCTTCAGTTCTACATCGCAACCTAGT 2252
Query 2213 AAAACTTTACGGGTGCTGCTTTGAAGGAGATCAGCGTTTGCTCGTATATGAGTATCT-CT 2271
||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||| |
Sbjct 2253 AAAACTTTATGGGTGCTGCTTTGAAGGAGAGCATCGTATGCTCGTATATGAGTATCTAC- 2311
Query 2272 CTAATGGAAGTCTCGATGACGCATTATTTG 2301
||||||||||||| ||| | || ||||||
Sbjct 2312 CTAATGGAAGTCTTGATCAGGCGCTATTTG 2341
Score = 728 bits (394), Expect = 0.0
Identities = 691/826 (84%), Gaps = 53/826 (6%)
Strand=Plus/Plus
Query 26 CAGGCTACGGAGATCT-C-TGT-TTCTGCTCCTAACCGTCTGGTTCTTGTATAGTT-CCG 81
|||| ||||||| ||| | ||| | || ||||| | |||||||| ||| || || |||
Sbjct 6 CAGGATACGGAGGTCTCCGTGTCTACTACTCCTCATTATCTGGTTCATGTGTA-TTGCCG 64
Query 82 GTTCGGTTCACGTGGTGGTTCGAGCCCAAAACCAAAACGGAGCCACTACTCATCCCGACG 141
|||||||||| |||||||| | | |||||||||| ||||||||||||||||||||||
Sbjct 65 GTTCGGTTCA---GGTGGTTCAATCTCAAAACCAAACCGGAGCCACTACTCATCCCGAC- 120
Query 142 AAGTGATTGTGGAAACAACAGCGCGAGCTTTGAACTCAATCTTCGCGACTTGGAAGATCC 201
| | ||||||||||||||||||||| |||||| ||||||||||||
Sbjct 121 -----------G-----A-AGCGCGAGCTTTGAACTCAATTTTCGCGGCTTGGAAGATCC 163
Query 202 AAGCGCCCAAG-GAATGGAACATCAGCGGCGAACTTTGCTCCGGCGCCGCCATCAACG-- 258
| ||| || || |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 164 AGGCG-CCGAGAGAATGGAACATCAGCGGCGAACTTTGCTCCGGCGCCGCTATCGACGCC 222
Query 259 A-TGTCACCATCGACGA-CAA---GGACC-ACAACCCTCTAATAAAATGCGGCTGTACTT 312
| ||| | | ||||| | ||| | || |||| ||||| || ||||||| ||||| ||
Sbjct 223 AGTGT-A-C-TCGAC-AGCAACCCTG-CCTACAATCCTCTCATCAAATGCGACTGTAGTT 277
Query 313 TCGTCAACTCCACAATCTGCCGCATCACCGCCCTAAAGGTTTATGCGAGAGATGTTGTAG 372
|| ||||||||||||||||||||||| | | ||||||||||||| |||||||||||
Sbjct 278 TCCAAAACTCCACAATCTGCCGCATCACTAACATCAAGGTTTATGCGATAGATGTTGTAG 337
Query 373 GACCTATACCTCAAGAGCTCTGGACTTTGATATTCCTCACCAATCTGAACCTGGCTCAAA 432
||||||| |||| ||||||||||||||| | || |||||||||||||||| ||| |||||
Sbjct 338 GACCTATCCCTCCAGAGCTCTGGACTTTAACATACCTCACCAATCTGAACTTGGGTCAAA 397
Query 433 ATTTTCTGACAGGCTCACTGCCTCCTGCAATTGGGAATTTGACTCTAATGCAGTGGATGA 492
|| |||| || |||||||| |||||||||||||| ||| |||||| |||||| |||||||
Sbjct 398 ATGTTCTCACTGGCTCACTTCCTCCTGCAATTGGAAATCTGACTCGAATGCAATGGATGA 457
Query 493 CTTTTGGGATCAATGCCTTGTCTGGCCCTGTTCCTAAGGAAATTGG-TCGCCTCACAGAT 551
|||||||||||||||| ||||||||||||||||||||||||||||| | | || ||||||
Sbjct 458 CTTTTGGGATCAATGCGTTGTCTGGCCCTGTTCCTAAGGAAATTGGTTTG-CTTACAGAT 516
Query 552 TTACGATCACTTAGTATTGGTTCAAATAACTTTTCCGGTTCTATACCTGCTGAGATCGGG 611
||| ||| |||| ||||| |||||||||||||||||||||||||||| | |||||| |||
Sbjct 517 TTAAGATTACTTGGTATTAGTTCAAATAACTTTTCCGGTTCTATACCAGATGAGATTGGG 576
Query 612 A-ATTGTACAAAACTACAGCAAATATACATAGGTAGTTCTGGACTCAATG-GGGA-AATA 668
| | |||||||||||||| || || ||||||| ||||||||||||| | | |||| ||||
Sbjct 577 AGA-TGTACAAAACTACAACAGATGTACATAGATAGTTCTGGACTC-A-GCGGGAGAATA 633
Query 669 CCTTTATCCTTGGCTAATCTTGTGGAGCT-G-ACTGTCGCTTGGATTATGGATCTTGAAG 726
|||||||| || ||||| || ||| |||| | || |||||||| |||||| ||||
Sbjct 634 CCTTTATCATTTGCTAACCTCGTGCAGCTGGAAC--AAGCTTGGATCGCGGATCTGGAAG 691
Query 727 TTACTGGTCGGATACCAGACTTTATAGGAAATTGGACCAAACTTACTACCTTGAGAATTA 786
|||| | || ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 692 TTACAGATCAGATACCAGACTTTATAGGAGATTGGACCAAACTTACTACCTTGAGAATTA 751
Query 787 TGGGAACTGGTTTGAGTGGTCCGATACCGTCGTCATTTTCCAACTT 832
| ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 752 TTGGAACTGGTCTGAGTGGTCCGATACCTTCGTCATTTTCCAACTT 797
> AT1G56120.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:20987288-20993072 REVERSE LENGTH=3144
Length=3144
Score = 1520 bits (823), Expect = 0.0
Identities = 991/1072 (92%), Gaps = 11/1072 (1%)
Strand=Plus/Plus
Query 1234 ATTATAACTTTTCGATTAATTGCGGAGGCCCAGAGATAAGGTCTGCTAGTGGAGCACTAT 1293
|||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1325 ATTATAACTTTTCGATCAACTGCGGAGGCCCAGAGATAAGGTCTGTTAGTGGAGCACTAT 1384
Query 1294 ATGAGAAA-GAGGACATGGATCTTGGACCAGCTTCGTTTGTCGTGAGTGCTGCTCAGAGA 1352
||| ||| |||||| |||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1385 TTGA-AAAGGAGGACGCGGATCTTGGACCAGCTTCGTTTGTTGTGAGTGCTGCAAAGAGA 1443
Query 1353 TGGGCAGCCAGTAGTGTAGGAAATTTTGCCGGAAGTAGCAGA-AATAAATATAGAGAGAC 1411
||||||||||||||||||||||||||||| || ||||||| | |||| ||| | || ||
Sbjct 1444 TGGGCAGCCAGTAGTGTAGGAAATTTTGCTGGCAGTAGCA-ACAATATATACATAGCTAC 1502
Query 1412 TTCACAATCACAATTTATCAACACTTTGGACTCGGAGCTTTTTCAGTCAGCAAGACTTTC 1471
||||| | ||||||||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct 1503 TTCACTAGCACAATTTATCAACACTATGGACTCAGAGCTTTTTCAGTCAGCACGACTTTC 1562
Query 1472 TGCATCTTCCCTAAGGTATTATGGGTTGGGGCTTGAAAATGGAGGCTACACCGTTACACT 1531
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1563 TGCATCTTCCCTAAGGTATTATGGGTTGGGGCTAGAAAATGGAGGGTACACCGTAACACT 1622
Query 1532 TCAGTTTGCTGAAATACAAATTCAAGGTTCTAACTCTTGGAAAGGTATTGGAAGACGACG 1591
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1623 TCAGTTTGCTGAAGTACAAATTGAAGGTTCTAACTCTTGGAAAGGTATTGGAAGACGACG 1682
Query 1592 TTTTGACATTTATGTCCAGGGAAGACTTGTTGAAAAGGATTTTGATATACGCAGAACAGC 1651
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1683 TTTTAACATTTATGTCCAGGGAAGACTTGTTGAAAAGGATTTTGATATACGCAGAACAGC 1742
Query 1652 TGGTGGGTCTTCGGTTCGAGCAGTTCAGAGAGAATATAAAACAAATGTATCAGAAAATCA 1711
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 TGGTGGCTCTTCGGTTCGAGCAGTTCAGAGAGAATATAAAACAAATGTATCAGAAAATCA 1802
Query 1712 TCTTGAAGTTCATCTTTTCTGGGCTGGAAAAGGAACATGCTGTATTCCTATCCAAGGGGC 1771
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1803 TCTCGAAGTCCATCTTTTCTGGGCTGGAAAAGGAACATGTTGTATTCCTATCCAAGGGGC 1862
Query 1772 TTATGGGCCATTAATATCGGCCATCAGTGCAACACCAGATTTCACACCAACTGTGGCTAA 1831
|||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1863 TTATGGGCCATTAATAGCGGCCGTCAGTGCGACACCAGATTTCACACCAACTGTGGCTAA 1922
Query 1832 TAGGCCACCATCAAAGGAAAAGAACATGACTGGTACTATTGTGGGTGTCATTGTTGCCGT 1891
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct 1923 TAGGCCACCATCAAAGGGAAAGAGCAGGACTGGTACTATTGTGGGTGTCATTGTTGGTGT 1982
Query 1892 AGGACTCTTGAGCATCTTAGCGGGTGTGGTTATCTTCATCATCCTAAAAAGTAGAAAGCC 1951
||||| ||||||||||| ||||||||||||||| || |||| | |||||| ||||| ||
Sbjct 1983 TGGACTTTTGAGCATCTTTGCGGGTGTGGTTATCCTCGTCATTCGAAAAAGAAGAAAACC 2042
Query 1952 GTACACAGATGATGAAGAGATACTTAGTATGGACGTAAAGCCTTACACCTTTACTTACTC 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2043 GTACACAGATGATGAAGAGATACTTAGTATGGACGTAAAGCCTTACACCTTTACTTACTC 2102
Query 2012 A-ATACTTAA-AAGTGCAACACAAGATTTCGATCCCTCAAACAAGCTTGGAGAGGGAGCG 2069
| |||||| || ||||||||||||||| |||| ||||||||||||||||||||||| |
Sbjct 2103 GGA-ACTTAAGAA-TGCAACACAAGATTTTGATCTCTCAAACAAGCTTGGAGAGGGAGGG 2160
Query 2070 TTTGGGGTTGTTTATAAGGGATCCCTCAATGATGGAAGAGAGATCGCAGTGAAGAAGCTG 2129
||||||| ||||||||||||| ||||||||||||||||||| | || |||||| || ||
Sbjct 2161 TTTGGGGCTGTTTATAAGGGAAACCTCAATGATGGAAGAGAGGTGGCGGTGAAGCAGTTG 2220
Query 2130 TCAACGGTTGGATCACGGCACGGGAAGGGTCAATTTGTTGCAGAAATTGTAGCAATTTCT 2189
|||| ||||||||||||| |||||||| |||||||||||||||||| | |||||||||
Sbjct 2221 TCAA---TTGGATCACGGCAAGGGAAGGGACAATTTGTTGCAGAAATTATTGCAATTTCT 2277
Query 2190 TCAGTTCTGCATCGTAACCTAGTAAAACTTTACGGGTGCTGCTTTGAAGGAGATCAGCGT 2249
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2278 TCAGTTCTACATCGCAACCTAGTAAAACTTTACGGGTGCTGCTTTGAAGGAGATCATCGT 2337
Query 2250 TTGCTCGTATATGAGTATCTCTCTAATGGAAGTCTCGATGACGCATTATTTG 2301
||||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 2338 TTGCTCGTATATGAGTATCTCCCTAATGGAAGTCTCGATCAGGCATTATTTG 2389
Score = 701 bits (379), Expect = 0.0
Identities = 587/685 (86%), Gaps = 23/685 (3%)
Strand=Plus/Plus
Query 162 GCGCGAGCTTTGAACTCAATCTTCGCGACTTGGAAGATCCAAGCGCCCAAGGAATGGAAC 221
||||||||||||||||| ||||||||| |||||||||| | ||||| | ||||||||||
Sbjct 49 GCGCGAGCTTTGAACTCCATCTTCGCGGCTTGGAAGATTCGGGCGCCGAGGGAATGGAAC 108
Query 222 ATCAGCGGCGAACTTTGCTCCGGCGCCGCCATCAACG--A-TGTCACCATCGACG-ACA- 276
||||||||||||||||||||||||| ||||||| ||| | ||| || ||||| | |
Sbjct 109 ATCAGCGGCGAACTTTGCTCCGGCGTCGCCATCGACGCCAGTGT-AC--TCGACTCAAAC 165
Query 277 -AGGACC-ACAACCCTCTAATAAAATGCGGCTGTACTTTCGTCAACTCCACAATCTGCCG 334
| | || |||| ||||| || ||||||| ||||| |||| |||||||||||||||||
Sbjct 166 CATG-CCTACAATCCTCTCATCAAATGCGACTGTAGTTTCCAAAACTCCACAATCTGCCG 224
Query 335 CATCACCGCCCTAAAGGTTTATGCGAGAGATGTTGTAGGACCTATACCTCAAGAGCTCTG 394
||| | | ||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 225 CATAAATAACATAAAGGTTTATGCGATAGATGTTGTAGGACCTATACCTCCAGAGCTCTG 284
Query 395 GACTTTGATATTCCTCACCAATCTGAACCT-GGCTCAAAATTTTCTGACAGGCTCACTGC 453
||| || | || |||||||||||||||||| || |||||||| ||| ||||||||||||
Sbjct 285 GACCTTAACATACCTCACCAATCTGAACCTAGG-TCAAAATTATCTCACAGGCTCACTGT 343
Query 454 CTCCTGCAATTGGGAATTTGACTCTAATGCAGTGGATGACTTTTGGGATCAATGCCTTGT 513
||||||| |||||||||||||||| |||||||||||||||||||| ||||| || ||||
Sbjct 344 CTCCTGCTATTGGGAATTTGACTCGGATGCAGTGGATGACTTTTGGAATCAACGCGTTGT 403
Query 514 CTGGCCCTGTTCCTAAGGAAATTGGTC-GCCTCACAGATTTACGATCACTTAGTATTGGT 572
|||||||| ||||||||||||| ||| || | || |||||| ||| |||| ||||| ||
Sbjct 404 CTGGCCCTATTCCTAAGGAAATCGGTTTGCTT-ACGGATTTAAGATTACTTGGTATTAGT 462
Query 573 TCAAATAACTTTTCCGGTTC-TATACCTGCTGAGATCGGGAATTGTACAAAACTACAGCA 631
|||||||||||||||||||| | |||| |||||||| |||| ||||||||||||||||||
Sbjct 463 TCAAATAACTTTTCCGGTTCCT-TACCAGCTGAGATTGGGAGTTGTACAAAACTACAGCA 521
Query 632 AATATACATAGGTAGTTCTGGACTCAATGG-GGAAATACCTTTATCCTTGGCTAATCTTG 690
||| ||||| | |||||||||||||| || |||| |||||||||| || |||||| |||
Sbjct 522 AATGTACATCGATAGTTCTGGACTCAGCGGAGGAA-TACCTTTATCATTTGCTAATTTTG 580
Query 691 TGGAGCTG-ACTGTCGCTTGGATTATGGATCTTGAAGTTACTGGTCGGATACCAGACTTT 749
||||| || | |||||||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct 581 TGGAGTTGGAA-GTCGCTTGGATTATGGATGTGGAACTTACAGGTCGGATACCAGACTTT 639
Query 750 ATAGGAAAT-TGGACCAAACTTACTACCTTGAGAATTATGGGAACTGGTTTGAGTGGTCC 808
|||||| | ||||||||||||||||||||||| || | |||||||||||||| || ||
Sbjct 640 ATAGGAT-TCTGGACCAAACTTACTACCTTGAGGATCCTCGGAACTGGTTTGAGCGGCCC 698
Query 809 GATACCGTCGTCATTTTCCAACTTA 833
||||||||||||||||||||||||
Sbjct 699 AATACCGTCGTCATTTTCCAACTTA 723
Score = 560 bits (303), Expect = 2e-158
Identities = 358/385 (93%), Gaps = 2/385 (1%)
Strand=Plus/Plus
Query 850 TAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTAATATTGGAGAATACTCAA 909
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||
Sbjct 812 TAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTACTATTGGAGGATACACAA 871
Query 910 GTTTGCGACAAGTTGATTTGAGCTTCAACAAACTACATGGACCAATTCCGGCTTCACTTT 969
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 872 GTTTGCAACAAGTTGATTTGAGCTTCAACAAATTACATGGACCAATTCCGGCTTCACTTT 931
Query 970 TCAACTTAAGTCAACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTTGC 1029
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 932 TCAACTTAAGTCGACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGATCCTTGC 991
Query 1030 CCACTCAAAAGAGGCAGTCTCTGATCAATATAGATGTGTCGTACAATGATTTGTCTGGAA 1089
|||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 992 CCACTCTAAAGGGGCAGTCTCTGAGCAATTTAGATGTGTCGTACAATGATTTGTCTGGAA 1051
Query 1090 GTCTTCCTTTATGGGTCAGTTTACCAAACTTGAAACTCAATCTAGTAGCTAACAATTTCA 1149
||||||||| ||||||||| |||||| | ||||| ||||||||||| |||||||| ||||
Sbjct 1052 GTCTTCCTTCATGGGTCAGCTTACCAGATTTGAAGCTCAATCTAGTTGCTAACAACTTCA 1111
Query 1150 CATTGGAAGGTCTTGACAACAGTGTTTTATCAGGACTGA-ACTGCCTGCAGAAGAATTTC 1208
|| ||||||||||||||||||| |||||||||||||| | | |||||||||||||| |||
Sbjct 1112 CACTGGAAGGTCTTGACAACAGGGTTTTATCAGGACT-ACATTGCCTGCAGAAGAACTTC 1170
Query 1209 GCCTGCAATCGCGGCAAAGGAATCT 1233
|||||||||| ||| |||||||||
Sbjct 1171 CCCTGCAATCGAGGCGAAGGAATCT 1195
Score = 549 bits (297), Expect = 5e-155
Identities = 393/437 (90%), Gaps = 16/437 (4%)
Strand=Plus/Plus
Query 2301 GTGAGTGGAAGGAAAAACTCTGATGAAAACCTGGAGGAGGGaaaaaaaTATCTTCTTGAA 2360
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2710 GTGAGTGGAAGGAAAAACTCTGATGAGAACCTGGAAGAGGGAAAAAAATATCTTCTTGAA 2769
Query 2361 TGGGCATGGAATCTACACGAGAAAAGCCGTGACGTTGAACTAATTGATGATGAGCTAGGT 2420
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||
Sbjct 2770 TGGGCATGGAATCTACACGAGAAAAACCGTGACGTTGAACTAATAGATGATGAGCTAAGT 2829
Query 2421 GAATACAACATGGAAGAAGTGAAACGCATGATTGGCGTTGCTCTGCTTTGCACTCAGTCG 2480
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2830 GAATACAACATGGAAGAAGTGAAACGCATGATTGGCATTGCTCTGCTTTGCACTCAGTCA 2889
Query 2481 TCTCATGCGTTGAGACCACCAATGTCACGCGTGGTAGCCATGTTGTCAGGAGATGCTGAG 2540
||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2890 TCTTATGCGTTGAGACCACCAATGTCACGAGTAGTAGCCATGTTGTCAGGAGATGCTGAG 2949
Query 2541 GTCAATGATGCCACCTCGAAGCCAGGCCATCTAATCGACAGTATATATGATGACACCACA 2600
||||||||||||||||| ||||||||| | |||| |||| ||| || |||||||||||||
Sbjct 2950 GTCAATGATGCCACCTCTAAGCCAGGCTACCTAACCGACTGTACATTTGATGACACCACA 3009
Query 2601 AGCTCCTC-TTACAGTGGCTTTCAAACCAAAGACACAAGCTTCTCAACGAGCTTTGT-GA 2658
|||||||| || ||| ||||||||| |||||||| |||||||| ||||||||| | |
Sbjct 3010 AGCTCCTCATT-CAGCAACTTTCAAACGAAAGACACTAGCTTCTCGACGAGCTTTATAG- 3067
Query 2659 CGCCTGGCCCA-AGA-G--AC--AGCGACAG----T--AAGCCAATGCTTGGATTCAAGA 2706
|||||||||| ||| | || || ||| | | ||||||||| ||||||||||||
Sbjct 3068 CGCCTGGCCCGGAGATGCCACTTAGAGACGGCGAATCGAAGCCAATGGTTGGATTCAAGA 3127
Query 2707 TCAAGGAGGGAAGATGA 2723
|||||||||||||||||
Sbjct 3128 TCAAGGAGGGAAGATGA 3144
> AT1G56145.2 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:21008149-21014018 REVERSE LENGTH=3280
Length=3280
Score = 732 bits (396), Expect = 0.0
Identities = 1130/1472 (77%), Gaps = 99/1472 (7%)
Strand=Plus/Plus
Query 849 CTAGTATTGAGGAACAACAATCTCACTGGGACAATACCGTCTAATATTGGAGAATACTCA 908
|||||||| |||||||| |||||||| || |||||||| || ||||||||||| ||||
Sbjct 955 CTAGTATTAAGGAACAATAATCTCACAGGCACAATACCTTCCAATATTGGAGATTACTTG 1014
Query 909 AGTTTGCGACAAGTTGATTTGAGCTTCAACAAACT-ACATGGACCAATTCCGGCTTCACT 967
| | |||||| |||||||||| |||||||| || || ||| | |||||| ||| | ||
Sbjct 1015 GGGCTACGACAACTTGATTTGAGTTTCAACAAGCTAAC-TGGGCAAATTCCAGCTCCGCT 1073
Query 968 TTTCAACTTAAGTCAACTTACTCACTTGTTTCTGGGAAACAACACGTTGAATGGCTCCTT 1027
|||||||| ||| || ||||||||||||||||| ||||| |||| | ||||||| |||||
Sbjct 1074 TTTCAACTCAAGACAGCTTACTCACTTGTTTCTTGGAAATAACAGGCTGAATGGTTCCTT 1133
Query 1028 GCCCACTCAAAAGAGGCAGTCTCTGATCAATATAGATGTGTCGTACAATGATTTGTC-TG 1086
|||||||||||||| | ||||| | ||||||||||||||| ||||||||||| | |
Sbjct 1134 ACCCACTCAAAAGAGTCCCTCTCTTAGCAATATAGATGTGTCATACAATGATTTAACAGG 1193
Query 1087 GAAGTCTTCCTT-TATGGG-TCAGTTTACCAAACTTGAAACTCAATCTAG-TAGCTAA-C 1142
| | |||||||| | |||| || | ||||||||||| |||| || || | | || || |
Sbjct 1194 GGA-TCTTCCTTCT-TGGGTTC-GCCTACCAAACTTGCAACTTAACCT-GATTGCCAACC 1249
Query 1143 AATTTCACATTGGAAGG-TCTTGACA-ACAGTGTTTTATCAGGACTGAACTGCCTGCAGA 1200
| ||| || ||| ||| || | ||| | || | |||| | ||||| ||||||| ||||
Sbjct 1250 ACTTT-ACCGTGGGAGGTTC-TAACAGA-AGGGCTTTACCCCGACTGGACTGCCTCCAGA 1306
Query 1201 AGAATTT-CGCCTGCAATCGCGGCAAAGGAATCTATTAT-AAC-TTTTCGATTAATTGCG 1257
|| |||| || ||||||||| || |||||| | |||| | ||| |||||| | ||||| |
Sbjct 1307 AGGATTTCCG-CTGCAATCGAGGAAAAGGAGTATATT-TCAACTTTTTCG-TCAATTGTG 1363
Query 1258 GAGGCCCAGAGATAAGGTCT-GCTAGTGGAGCACTATATGAGAAA-GAGGACATGG-ATC 1314
|||||| || || |||||| | ||||||||| | ||||| ||| || || || | |
Sbjct 1364 GAGGCCGGGATATCAGGTCTAG-TAGTGGAGCTTTGTATGA-AAAGGACGAGGGGGCA-C 1420
Query 1315 TTGGACCAGCTTCGTTTGTCGTGAGTGCTGCTCAGAGATGGGCAGCCAGTAGTGTAGGAA 1374
||||||||||| | ||| |||| ||| | ||||||||||||| ||| | |||||| |
Sbjct 1421 TTGGACCAGCTACTTTTTTCGTAAGTAAAACGCAGAGATGGGCAGTCAGCAATGTAGG-A 1479
Query 1375 AT-TTTGCCGGAAGTAGCAGAAATAAATATAGAGAGAC-TTC-ACAATCACAATTTATC- 1430
| ||| | || |||| ||| ||| |||| | || | ||| ||| | |||||| |
Sbjct 1480 CTATTTACTGGGAGTAACAGTAATCAATACATAG-CTCTTTCGGCAA-CGCAATTT-GCA 1536
Query 1431 AACACTTTGGACTCGGAGCTTTTTCAGTCAGCAAGACTTTCTGCATCTTCCCTAAGGTAT 1490
||||| | ||||| |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 1537 AACACGTCAGACTCAGAGCTTTTCCAATCAGCGAGACTCTCTGCATCTTCTTTAAGGTAT 1596
Query 1491 TATGGGTTGGGGCTTGAAAATGGAGGCTACACCGTTACACTTCAGTTTGCTGAAATACAA 1550
|| || ||||||| |||||||||||||| | || || ||||||||||||| ||||||
Sbjct 1597 TACGGACTGGGGCTAGAAAATGGAGGCTATAGTGTAACGGTTCAGTTTGCTGAGATACAA 1656
Query 1551 ATTCAAGGTTCTAACT-CTTGGAAAGGTATTGGAAGACGACGTTTT-GACATTTATGTCC 1608
|| ||||||||||| | | |||||| || ||||||| ||| |||| ||||| |||||||
Sbjct 1657 ATACAAGGTTCTAA-TACCTGGAAAAGTCTTGGAAGGCGA-ATTTTCGACATATATGTCC 1714
Query 1609 AGGGAAGACTTGTTGAAAAGGATTTTGATATACGCAGAACAGCTGGT---GGGTCTTCGG 1665
|||||| ||||||||| ||||||||||| || ||| || ||||| | || || | |
Sbjct 1715 AGGGAAAACTTGTTGAGAAGGATTTTGACAT--GCA-AAAAGCTGCTAACGGTTC-T-AG 1769
Query 1666 T-T-CGAG-CAGTTCAGAGAGAATATAAAACAAATGTATCAGAAAATCATCTTGAAGTTC 1722
| | |||| | |||| |||| |||||| ||||||||||||||||| | ||||||||||
Sbjct 1770 TATCCGAGTTA-TTCAAAGAGTCTATAAAGCAAATGTATCAGAAAATTACCTTGAAGTTC 1828
Query 1723 ATCTTTTCTGGGCTGGAAAAGGAACATGCTGTATTCCTA-TCCAAGGGGCTTATGGGCCA 1781
|||||||||||||||||||||| || |||||||||||| || |||| |||||||||||
Sbjct 1829 ATCTTTTCTGGGCTGGAAAAGGGACCTGCTGTATTCCTGCTC-AAGGCACTTATGGGCCA 1887
Query 1782 TTAATATCGGCCATCAGTGCAACACCAGATTTCACACCAACTGTGGCTAATAGGCCACCA 1841
||| | || || ||||||||||| |||||||||| ||| ||||| |||| | ||
Sbjct 1888 TTAGTCTCAGCTATCAGTGCAACTCCAGATTTCATACCTACTGTAAAAAATAAGTTGCCC 1947
Query 1842 TC-AAAGG-AA-AAGAACATGACTGGTA-CTATTGT-GGGTG-TCATTGTTGCCGTAGG- 1894
|| ||| || || ||||| || || | ||||| ||| | | ||||| | | |||
Sbjct 1948 TCGAAATCCAAGAAAAACAT---TGTTATC-ATTGTAGGG-GCT-ATTGTAGGAGCAGGG 2001
Query 1895 ACTCTTGA-GCATCTTAGCGGGTGTGGT-TA-TCTTCAT-CATCC-TA--AAAAGTAGAA 1947
| | || | | || || | | | || | | |||| || ||||| || ||||| | ||
Sbjct 2002 A-TGTT-ATGTATATTGGTGA-T-TGCTATCCTCTT-ATTCATCCGTAGGAAAAGAA-AA 2055
Query 1948 AGC-CGTACACAGATGATGAAGAGATACTTAGTATGGACGTAAAGCCTTACACCTTTACT 2006
|| || | ||||| |||| | || ||| || || ||| ||| |||||||||| |
Sbjct 2056 AGGGCGG-CT--GATGAAGAAGTGCTAAACAGTCTGCACATAAGGCCCTACACCTTTAGT 2112
Query 2007 TACTCA-ATACTTAAAAGTGCAACACAAGATTTCGATCCCTCAAACAAGCTTGGAGAGGG 2065
|||||| | ||| | || |||||| |||||||| ||||| || ||||||||||| |||||
Sbjct 2113 TACTCAGA-ACTCAGAACTGCAACTCAAGATTTTGATCCTTCCAACAAGCTTGGGGAGGG 2171
Query 2066 AGCG-TTTGGGGTTGTTTATAAGGGATCCCTCAATGATGGAAGAGAGATCGCAGTGAAG- 2123
|| | ||||| ||||| ||||||| || || || ||||||||||| || ||||||
Sbjct 2172 AG-GATTTGGACCTGTTTTTAAGGGAAAACTGAACGACGGAAGAGAGATAGCCGTGAAGC 2230
Query 2124 AAGCTGTCAACGGTTGGATC-ACGGCACGGGAAGGGTCAATTTGTTGCAGAAATTGT-AG 2181
|| ||||| | ||| ||| | |||| || ||||||||||||||||| || |||| |
Sbjct 2231 AAT-TGTCA--G-TTGCATCCA-GGCAAGGAAAGGGTCAATTTGTTGCGGAGATTGCCA- 2284
Query 2182 CAATTTCTTCAGTTCTGCATCGTAACCTAGTAAAACTT-TACGGGTGCTGCTTTGAAGGA 2240
| || || | |||| |||||| ||||| |||||| || || || |||||| |||| |||
Sbjct 2285 CTATATCAGCTGTTCAGCATCGCAACCTTGTAAAA-TTGTATGGATGCTGCATTGAGGGA 2343
Query 2241 GATCAGCGTTTGCTCGTATATGAGTATCTCTC 2272
||||||| |||| |||||||| || |||||
Sbjct 2344 AATCAGCGCATGCTTGTATATGAATACCTCTC 2375
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136253417188
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5