BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg924204

Length=593
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 |...  78.7    6e-14


> AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 
| chr1:17643976-17647035 FORWARD LENGTH=3060
Length=3060

 Score = 78.7 bits (42),  Expect = 6e-14
 Identities = 52/57 (91%), Gaps = 0/57 (0%)
 Strand=Plus/Plus

Query  149  AAATTCCAGTCGAGCTGCTTCAGCTAACTAAGTTGGTGTCTCTCGATCTTTCTTCTA  205
            |||||||| || | || ||||||||||| ||||||||||||||||||||||||||||
Sbjct  545  AAATTCCAATCAATCTTCTTCAGCTAACAAAGTTGGTGTCTCTCGATCTTTCTTCTA  601



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 28532995496


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5