BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924246 Length=326 Score E Sequences producing significant alignments: (Bits) Value AT5G66710.1 | Symbols: | Protein kinase superfamily protein | ... 235 2e-61 > AT5G66710.1 | Symbols: | Protein kinase superfamily protein | chr5:26636609-26638794 FORWARD LENGTH=1448 Length=1448 Score = 235 bits (127), Expect = 2e-61 Identities = 155/168 (92%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 125 CATTGAGCAGAAGAAGAAGTTTCAAAGAAAGGTTTTGCTGCTTTCCAAGTTTCA-ACATG 183 ||||||||||| |||||||||||| ||| ||||||||||||||||||||||| | ||||| Sbjct 330 CATTGAGCAGAGGAAGAAGTTTCAGAGAGAGGTTTTGCTGCTTTCCAAGTTT-AGACATG 388 Query 184 AAAACAATGTGCAGTTCATTGGGGCGTGCATAGAACCAAAGTTGATGATAATAACTGAAC 243 |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 389 AAAACATTGTGCGGTTCATTGGGGCGTGCATAGAACCAAAGTTGATGATAATTACTGAAC 448 Query 244 TCATAGAAGGCAATACTCTTCAGAAGTTTATGCTGAGTACTCAGTCCA 291 |||| ||||||||||||||||||||||||||| ||||| || ||||| Sbjct 449 TCATGGAAGGCAATACTCTTCAGAAGTTTATGTTGAGTGTTC-GTCCA 495 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15180860198 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5