BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg924422

Length=1471
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G26010.1 | Symbols:  | Galactose oxidase/kelch repeat superf...   110    5e-23


> AT3G26010.1 | Symbols:  | Galactose oxidase/kelch repeat superfamily 
protein | chr3:9511901-9513316 FORWARD LENGTH=1416
Length=1416

 Score =  110 bits (59),  Expect = 5e-23
 Identities = 74/81 (91%), Gaps = 1/81 (1%)
 Strand=Plus/Plus

Query  1273  TCCCACGGTGGATGGAATCGCTGCCTTGTCCTCCCCAAGTTGAGATGATGGATACAACTT  1332
             |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct  1124  TCCCACGGTGGATGGAATCGGTGCCTTGTCCTCCCCAAGTTGAGATGATGAATACAGCTT  1183

Query  1333  CAGTACTCTCTTACATT-CTT  1352
             | ||| |||||||| || |||
Sbjct  1184  CGGTAATCTCTTACGTTACTT  1204



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 72539787525


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5