BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924441
Length=1476
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70770.1 | Symbols: | Protein of unknown function DUF2359, ... 1192 0.0
AT3G11880.1 | Symbols: | Protein of unknown function DUF2359, ... 813 0.0
AT1G23170.2 | Symbols: | Protein of unknown function DUF2359, ... 540 2e-152
> AT1G70770.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:26688230-26691277 REVERSE LENGTH=2317
Length=2317
Score = 1192 bits (645), Expect = 0.0
Identities = 1058/1249 (85%), Gaps = 62/1249 (5%)
Strand=Plus/Plus
Query 134 AATCGTATGCGTA-TGAGCCGGAGGTTCAGCTATTGAGA-TT-CATCGAGTACCTTGAGA 190
||||||||||| | | |||| ||| |||||||| ||||| || | | || ||| ||| ||
Sbjct 571 AATCGTATGCG-AGTCAGCCTGAGATTCAGCTAATGAGATTTGC-T-GATTACTTTGGGA 627
Query 191 GAACAC--T-T----TC-C-GCTGTGCAATTTCCATGGGCGAATATGTTCAAGGAGTCTC 241
|| ||| | | || | |||||||||||||||||| ||| ||||| || |||||||
Sbjct 628 GAGCACTTTCTGGAGTCTCATCTGTGCAATTTCCATGGGTGAAGATGTTTAAAGAGTCTC 687
Query 242 CTTTGCCCAAGCTGATCGACGTGATCGATGTTCCTTTATCGCAAATTCCCGACCCTGTCT 301
||||| | |||||||| ||| | ||||| ||| | || ||||| || || || |
Sbjct 688 CTTTGTCTAAGCTGAT-----TGA---A-GTTCCGTTAGCTCATATTCCGGAACCAGTGT 738
Query 302 ACAAAACATCAGTCGATTGGATCAACCATCTTCCTCTT-ATGACACTAT-GTGGCTTTGT 359
| || |||||||| |||||||||||||||| ||| || | | |||| | | | ||||||
Sbjct 739 ATAAGACATCAGTTGATTGGATCAACCATCGTCCAATTGA-GGCACT-TGGAGCCTTTGT 796
Query 360 TTTGTGGGCGTTTAATCATATTCTCACTTATTTGGCAGCAGCACAACTAGGACATACCAA 419
|||||||| ||| || ||||||||| |||| ||||||||||| ||| | | ||
Sbjct 797 GTTGTGGGCTTTTGATTGTATTCTCACAGATTT---AGCAGCACAACAAGGTGGTGCTAA 853
Query 420 AGGTGGGGAGAAGGGTGCG-CAACATACGT-CTTCCAAGTCTCGGGTAGCAATATTTGTT 477
||||||| ||||||||| | ||||| || | ||||||| |||| ||| ||||||||||||
Sbjct 854 AGGTGGGAAGAAGGGTG-GTCAACAAAC-TACTTCCAAATCTCAGGTGGCAATATTTGTT 911
Query 478 GCATTAGCAATGGTATTGCGTA--ACAGACCTAATGCTTTGGCTATTGTATTGCCGACTC 535
|||||||| ||||||||||||| | || ||| |||||||| ||| ||||||||| ||||
Sbjct 912 GCATTAGCGATGGTATTGCGTAGGA-AG-CCTGATGCTTTGACTAATGTATTGCCAACTC 969
Query 536 TGAGGGAGAAGCGTAAGTATCAAGGACATGACAAGCTTCCGATTACAGTTTGGATGATGG 595
|||||||||| | ||||||||| || || || ||||||||| ||||||||||||||||||
Sbjct 970 TGAGGGAGAATCCTAAGTATCAGGGTCAGGATAAGCTTCCGGTTACAGTTTGGATGATGG 1029
Query 596 CTCAGGCCTCCCAAGGTGATTTATCTGTAGGCTTGTATTCATGGGCGCATAACTTGTTAC 655
|||||||||||||||||||| || |||||||||||||||||||||| || ||||||||||
Sbjct 1030 CTCAGGCCTCCCAAGGTGATATAGCTGTAGGCTTGTATTCATGGGCTCACAACTTGTTAC 1089
Query 656 CACTAGTCGG---T-AG--C---AACCCTCAGTCAAGGGATCTCATCCTGCAGTTGGTTG 706
| | ||||| | || | |||||||||||||||||||||||||||||||||||||
Sbjct 1090 CTGTTGTCGGTAATAAGAACTGTAACCCTCAGTCAAGGGATCTCATCCTGCAGTTGGTTG 1149
Query 707 AGAAAATTTTGTCGAATCAAAATGCTCGGACTATACTTGTAGATGGAGCTGTTGAAGA-G 765
||||||||||| |||||| ||| ||||| || ||||||||| ||||||||||| | || |
Sbjct 1150 AGAAAATTTTGACGAATCCAAAGGCTCGTACCATACTTGTAAATGGAGCTGTT-AGGAAG 1208
Query 766 GGACCA-CGACTGATTCCACCTCTTTCATTTGAGATCTTGCTGCGGCTTACATTCCCTGC 824
||| | || |||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 1209 GGAG-AGCGTTTGATTCCACCTCCTTCATTTGAGATCTTGTTGCGGCTTACATTCCCTGC 1267
Query 825 TTCATCCGCAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATTTATCCTTTGTTGAAGGA 884
||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||
Sbjct 1268 ATCATCTGCAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATATATCCCTTGCTGAAAGA 1327
Query 885 AGTGGCTCTTGCCGGTGCATCAGGAAGCAAGTTAATGAAACAAGTCACTGAACAGATATT 944
|||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 1328 AGTGGCTCTTGCTGGTGCACCAGGAAGCAAGGCGATGAAACAAGTCACACAACAGATATT 1387
Query 945 CACTTTTTCTTTGAGATTAGCTGCAGAAGGAAATCCTGTTTTAGCCAAGGAAGCTACAGC 1004
||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1388 CACTTTTGCTCTGAAATTAGCTGGAGAAGGAAATCCTGTTTTAGCCAAGGAAGCTACAGC 1447
Query 1005 AATTGCTATCTGGTCTGTGACCGAGAACGTTGATTGCTGCAGGCTCTGGGAAAATCTCTA 1064
|||||||||||||||||||||| | ||| |||||||||||| || |||||| ||||||||
Sbjct 1448 AATTGCTATCTGGTCTGTGACCCAAAACTTTGATTGCTGCAAGCACTGGGACAATCTCTA 1507
Query 1065 TGAGGAGAA-C-GAAGAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTAGACGAATGGAAG 1122
||||||| | | |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1508 CAAGGAGAATCTG--GAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTTGAAGAATGGAAA 1565
Query 1123 GATCATTCTCG-CAAACTATCATCATCACC-AAGTGATACTCTCACTCTCAGTGGAACTA 1180
|| ||||| | |||||||||||||||||| || |||| |||||||||||| ||||||
Sbjct 1566 GAGCATTCG-GTCAAACTATCATCATCACCGAA-TGATGCTCTCACTCTCAACCGAACTA 1623
Query 1181 TGGAGAGCTTGAGTCTAAAGAACGAAAAAGCCATCACTGAAGGAGGAGCCAATGGTTCTC 1240
|| | ||||| || ||||||||||| | | ||||||||| ||||||||||||| |||||
Sbjct 1624 TGAAAAGCTTCAGGCTAAAGAACGAGGAGGTCATCACTGAGGGAGGAGCCAATGCTTCTC 1683
Query 1241 TTTACAAAGAAGCTGACAAGTCTTGCAGAGCGATCTCGGGGAGACTCTCCCGTGGAAGTG 1300
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1684 TTTACAAAGAAGCTGACAAGTCTTGCAAAACGATCTCGGGGAGACTCTCCCGTGGAAGTG 1743
Query 1301 GCTGCCTCAAAGGAACATCCATTACTGTT-GTGGTTCTAGCTGCTGCAG 1348
||||||||||||||||| |||||||| || ||| |||||||||||||||
Sbjct 1744 GCTGCCTCAAAGGAACAGCCATTACT-TTAGTGTTTCTAGCTGCTGCAG 1791
> AT3G11880.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr3:3751660-3754060 FORWARD LENGTH=1707
Length=1707
Score = 813 bits (440), Expect = 0.0
Identities = 717/846 (85%), Gaps = 38/846 (4%)
Strand=Plus/Plus
Query 646 AACTTGTTACCACTAGT-CGGTAGCAACCCTCAGTCAAGGGATCTCATCCTGCAGTTGGT 704
|||||||||||| || | | |||||||| ||||||||| ||||||||||||||||||||
Sbjct 641 AACTTGTTACCAGTA-TCCCGTAGCAACTCTCAGTCAATGGATCTCATCCTGCAGTTGGC 699
Query 705 TGAGAAAATTTTGTCGAATCAAAATGCTCGGACTATACTTGTAGATGGAGCTGTTGA-AG 763
||||| |||||||| |||| |||||||||||||||||||| | ||| | ||| | ||
Sbjct 700 TGAGATGATTTTGTCTAATCTTGATGCTCGGACTATACTTGTAAACGGAACCGTT-ATAG 758
Query 764 AGGGACCA-CGACTGATTCCACCTCT-TTCATTTGAGATCTTGCTGCGGCTTACATTCCC 821
| | || ||||||||| ||||| | | |||||||| ||||| ||||||||||||||||
Sbjct 759 A-TAAACAGCGACTGATTTCACCT-TATGCATTTGAGCTCTTGATGCGGCTTACATTCCC 816
Query 822 TGCTTCATCCGCAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATTTATCCTTTGTTGAA 881
||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 817 TGCTTCATCTGAAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATTTATCCCTTGTTGAA 876
Query 882 GGAAGTGGCTCTTGCCGGTGCATCAGGAAGCAAGTTAATGAAACAAGTCACTGAACAGAT 941
|||||||||||||||| ||| | |||||||| |||||||||||||||||||| |||| ||
Sbjct 877 GGAAGTGGCTCTTGCCTGTGAACCAGGAAGCGAGTTAATGAAACAAGTCACTCAACAAAT 936
Query 942 ATTCACTTT-TTCTTTGAGATTAGCTGCA-GAAGGAAATCCTGTTTTAGCCAAGGAAGCT 999
|||| | || |||||||| | |||||| | |||| ||||| |||||||||||||||||||
Sbjct 937 ATTC-CATTATTCTTTGATAATAGCTGGAAGAAG-AAATCTTGTTTTAGCCAAGGAAGCT 994
Query 1000 ACAGCAATTGCTATCTGGTCTGTGACCGAGAACGTTGATTGCTGCAGGCTCTGGGAAAAT 1059
|||||||| ||| |||||||| ||||||| ||||| |||||||||| || ||||||||
Sbjct 995 ACAGCAATCGCTGTCTGGTCTCTGACCGAAAACGTAGATTGCTGCAAGCAGTGGGAAAAA 1054
Query 1060 CTCTAT-GAGGAGAACGAAGAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTAGACGAATG 1118
|||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 1055 CTCTATTG-GGAGAATAAAGAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTAGATGAAAG 1113
Query 1119 GAAG-GATCATTCTCG--CAAACTATCATCATCACCAAGTGATAC-TCTCACTCTCAGTG 1174
| | ||| ||| || ||||||| |||||||||| ||| ||| | |||| |||| |
Sbjct 1114 GG-GTGAT-ATT-TCCATCAAACTAGCATCATCACCGAGTCATAAAT-TCACACTCAATC 1169
Query 1175 GAACTATGGAGAGCTTGAGTCTAAAGAACGAAAAAGCCATCACTGAAGGAGGAGCCAATG 1234
||||||||||||| | || ||||| ||||||||||||||||||||||||||| ||| ||
Sbjct 1170 AAACTATGGAGAGCATCAGGCTAAAAAACGAAAAAGCCATCACTGAAGGAGGAACCATTG 1229
Query 1235 GTTCTCTTTACAAAGAAGCTGACAAGTCTTGCAGAGCGATCTCGGGGAGACTCT-CCCGT 1293
|||||| ||||||||||||||||||||| |||| || ||| ||||| ||| ||| ||| |
Sbjct 1230 GTTCTCGTTACAAAGAAGCTGACAAGTCCTGCAAAGTGATGTCGGGTAGATTCTTCCC-T 1288
Query 1294 GGAAGTGGCTGCCTCAAAGGAACATCCATTA---CTGTTGTGGTTCTAGCTGCTGCAGTT 1350
| || || |||||||||||| ||| |||||| ||| ||||||||||||||||| || |
Sbjct 1289 GAAAATGCCTGCCTCAAAGGTACAGCCATTATTACTGCTGTGGTTCTAGCTGCTGTAGCT 1348
Query 1351 GTACTATCTTCCAACCTGGAGGCTACATCCGTGCTGAAGAAGCTGCTGGACTCGGTGGAT 1410
|||||| ||||||||||| || | |||||||||| || ||||||| ||| |
Sbjct 1349 GTACTAGCTTCCAACCTG-----TA-----G-GCTGAAGAAGATGGTGGACTCATTGGTT 1397
Query 1411 CTGCACCTATACTTCAATGCAACCACCACAGCTTTGAAGAGCTAAGAGAGAAATATCATT 1470
|||||||||||||||||||||| |||| |||||||||||| |||||||||| ||| ||||
Sbjct 1398 CTGCACCTATACTTCAATGCAAACACCTCAGCTTTGAAGAACTAAGAGAGATATACCATT 1457
Query 1471 GTCCTT 1476
||||||
Sbjct 1458 GTCCTT 1463
Score = 337 bits (182), Expect = 2e-91
Identities = 424/535 (79%), Gaps = 39/535 (7%)
Strand=Plus/Plus
Query 132 GAAATCGTATGCGTATGAGCCGGAGGTTCAGCTATTGAGATTCATCGAGTACCTTGAGAG 191
|||||| |||| | || |||||||| |||||||||| ||| |||| ||||||||||
Sbjct 121 GAAATCACATGCCTTTGTGCCGGAGGAGCAGCTATTGAAATTTGTCGATTACCTTGAGAT 180
Query 192 AACACTTTCCGCTGTGCAATTTCCATGGGC-GAATATGTTC-AAGGAGTCTCCTTTG-CC 248
|| ||||||| ||||||||| || || ||| | | |||||| |||| |||||| ||| ||
Sbjct 181 AAAACTTTCCTCTGTGCAATATCTAT-GGCTGGACATGTTCAAAGG-GTCTCC-TTGCCC 237
Query 249 CAAGCTGATCGACGTGATCGATGTTCCTTTATCGCAAATTCCCG-ACCCTGTCTACAAAA 307
||||||||| || |||| |||||||| ||||| || ||||| | | |||||||| | |
Sbjct 238 CAAGCTGATAGATATGATTGATGTTCCATTATCTCATATTCCTGTA-TCTGTCTACGACA 296
Query 308 CATCAGTCGATTGGATCAAC-CATCTTCCTCTTATGACACTATGTGGCTTTGTTTTGTGG 366
|||||||||| ||| || || || || || || | ||| |||| |||||| |||||
Sbjct 297 CATCAGTCGAGTGGCTCGACAAAT-TTTCTATTGGGTTACTCTGTGCCTTTGTAGTGTGG 355
Query 367 GCGTTTAATCATATTCTCACTTA-TTTGGCAGCAGCACAACTAGGACATACCAAAGGTGG 425
|||| |||| | ||||||| | ||||| | | | | || ||| | | ||| |
Sbjct 356 TCGTTGAATCGTCTTCTCAC-GATTTTGG-A--A-C-C-AC---CACA-A-C--AGG-GA 400
Query 426 GGAGAAGGGTGCGCAACATACGT-CTTCCAAGTCTCGGGTAGCAATATTTGTTGCATTAG 484
|| | ||| || ||| | ||||||| | || |||||| ||||||||||| |||
Sbjct 401 GG-TCA-CCAGCG--ACGTAC-TACTTCCAAATTTCACGTAGCAGTATTTGTTGCACTAG 455
Query 485 CAATGGTATTGCGTAACAG-ACCTAATGCTTTGGCTATTGTATTGCCGACTCT-GAGGGA 542
|||||||||||||||| | ||||||| |||||| |||||||||||||||||| ||| |
Sbjct 456 CAATGGTATTGCGTAA-TGAACCTAATACTTTGGTTATTGTATTGCCGACTCTCAAGGAA 514
Query 543 GAAGCGTAAGTATCAAGGACATGACAAGCTTCCGATTACAGTTTGGATGATGGCTCAGGC 602
| | || ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 515 G-A-CG--AGTATCAAGGACATGACAAGCTTCCGATTTTAGTTTGGATGATGGCTCAGGC 570
Query 603 CTCCCAAGGTGATTTATCTGTAGGCTTGTATTCATGGGCGCATAACTTGTTACCA 657
||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 571 CTCCCAAGGTGATTTATCTGTAGGCTTGTATTCATGGTCGTGTAACTTGTTACCA 625
> AT1G23170.2 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:8212556-8215807 FORWARD LENGTH=2307
Length=2307
Score = 540 bits (292), Expect = 2e-152
Identities = 768/992 (77%), Gaps = 56/992 (6%)
Strand=Plus/Plus
Query 263 TGATCGATGTTCC-TTTATCGCAAATTCCCGACCCTGTCTACAAAACATCAGTC-GATTG 320
|||||||| |||| || || || ||||| || | || || || ||||||| | |||||
Sbjct 806 TGATCGATATTCCACTT-TCTCATATTCCTGAAGCAGTGTATAAGACATCAG-CTGATTG 863
Query 321 GATCAACCATCTTCCTC-TT-ATGACACTAT-GTGGCTTTGTTTTGT-GGGCGTTTAATC 376
||| ||||| | ||| | || | | |||| | | | |||||| |||| |||| || ||
Sbjct 864 GATTAACCAACGTCC-CATTGA-GGCACT-TGGAGCCTTTGTATTGTGGGGC-TTGGATT 919
Query 377 ATATTCTCACTTATTTGGCAGCAGCACAACTAGGACATACCAAAGGTGGGGAGAAGGGTG 436
|||||| || | || | || | ||||| |||| | ||| ||||| |||| || |
Sbjct 920 GTATTCTTGCTGACTT-G--GCTGTACAACAAGGAGGTGTCAAGGGTGGTAAGAAAGGAG 976
Query 437 CGCAACATACGTCTTCCAAGTCTCGGGTAGCAATATTTGTTGCATTAGCAATGGTATTGC 496
| ||||| | ||||| || |||| ||| || |||||||| || |||||||||| ||||
Sbjct 977 CACAACAGGCTTCTTCGAAATCTCAGGTTGCGATATTTGTGGCGGTAGCAATGGTTTTGC 1036
Query 497 GTAACAGACCTAATGCTTTGGCTATTGTATTGCCGACTCTGAGGGAGAAGCGTAAGTATC 556
|||| | |||| ||||||| ||| | ||||||| ||| |||||||||| | |||||||
Sbjct 1037 GTAAGAAACCTGATGCTTTAACTAATATATTGCCAACTTTGAGGGAGAATCCCAAGTATC 1096
Query 557 AAGGACATGACAAGCTTCCGA-TTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGAT 615
| ||||| || |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1097 AGGGACAGGATAAGCTTCC-AGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGAT 1155
Query 616 TTATCTGTAGGCTTGTATTCATGGGCGCATAACTTGTTACCACTAGTCGGTAGCAA---- 671
|||| ||||||||||| || ||||| || ||||||||||| | ||| |||||||
Sbjct 1156 ATATCAGTAGGCTTGTACTCGTGGGCTCACAACTTGTTACCGGTGGTCAGTAGCAAGAGT 1215
Query 672 --C---CCTCAGTCAAGGGATCTCATCCTGCAGTTGGTTGAGAAAATTTTGTCGAATCAA 726
| |||||||||||||||||||| || ||||||||||||| || ||||| || |
Sbjct 1216 TGCAATCCTCAGTCAAGGGATCTCATTCTTCAGTTGGTTGAGAGGATCTTGTCCAACCCG 1275
Query 727 AATGCTCGGACTATACTTGTAGATGGAGCTGTTGAAGA-GGGACCA-CGACTGATTCCAC 784
|| || ||||| ||||||||| |||| |||||| | || |||| | ||| |||||||||
Sbjct 1276 AAGGCCCGGACCATACTTGTAAATGGGGCTGTT-AGGAAGGGAG-AGCGATTGATTCCAC 1333
Query 785 CTCTTTCATTTGAGATCTTGCTGCGGCTTACATTCCCTGCTTCATCCGCAAGAGTAAAGG 844
||| ||| |||||||||||| | || |||||||||||||| || ||||||||||| ||||
Sbjct 1334 CTCCTTCGTTTGAGATCTTGGTTCGACTTACATTCCCTGCATCTTCCGCAAGAGTGAAGG 1393
Query 845 CTACAGAGAGGTTTGAGGCAATTTATCCTTTGTTGAAGGAAGTGGCTCTTGCCGGTGCAT 904
|||||||||||||||||||||| ||||| ||| ||||||| ||| ||||||| ||||| |
Sbjct 1394 CTACAGAGAGGTTTGAGGCAATATATCCCTTGCTGAAGGAGGTGTCTCTTGCTGGTGC-T 1452
Query 905 CA-GGAAGCAAGTTAATGAAACAAGTCACTGAACAGATATTCACTTTTTCTTTGAGATTA 963
| || || ||| |||||| |||||||| | || |||||||||||| || ||| | |
Sbjct 1453 CCTGGGAGTAAGGCAATGAAGCAAGTCACACAGCAAATATTCACTTTTGCTCTGAAAGCA 1512
Query 964 GCTGCAGAAGGAAATCCTGTT-TTAGCCAAGGAAGCTACAGCAATTGCTATCTGGTCTGT 1022
|| | |||| |||||| || |||||||||||||| | ||||| |||||||| || |
Sbjct 1513 GCCGGGGAAGAAAATCCC-TTATTAGCCAAGGAAGCGGCTGCAATCACTATCTGGGCTCT 1571
Query 1023 GAC-CGAGAACGTTGATTGCTGCAGGC-TCTGGGAAAATCTCTATGAG-GAGAAC--GAA 1077
|| | | || ||||||||||||| || | ||||| ||||| ||| | || || |||
Sbjct 1572 CACTCAA-AATGTTGATTGCTGCAAGCAT-TGGGAGAATCTTTAT-ACCGACAATTTGAA 1628
Query 1078 GAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTAGACGAATGGAAGGATCATTCTCG-CAA 1136
| || ||||||||||||||||||||||| | | ||| |||||||| | |||| | |||
Sbjct 1629 -A-GCCAGTGTTGCTGTTCTTAAAAAGCTCATTGGCGAGTGGAAGGAGCGTTCT-GTCAA 1685
Query 1137 ACT-ATCATCATCACCAAGTGATACTCTCACTCTCAGTGGAACTATGGAGAGCTTGAGTC 1195
|| | | || | | ||| || |||||||||| ||| ||| |||||||||| |
Sbjct 1686 GCTGA-C-TCCTG-C----TGAAACCCTCACTCTCAACCAAACAATGAAGAGCTTGAGGC 1738
Query 1196 TAAAGAACGAAAAAGC-CATCACTGAAGGAGG 1226
||||||||| |||| | | ||||| |||||
Sbjct 1739 AAAAGAACGAGGAAGCTCTT-ACTGAGGGAGG 1769
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72790790250
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5