BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924525
Length=1504
Score E
Sequences producing significant alignments: (Bits) Value
AT1G64190.1 | Symbols: | 6-phosphogluconate dehydrogenase fami... 2399 0.0
AT5G41670.1 | Symbols: | 6-phosphogluconate dehydrogenase fami... 1762 0.0
> AT1G64190.1 | Symbols: | 6-phosphogluconate dehydrogenase family
protein | chr1:23825328-23827136 REVERSE LENGTH=1809
Length=1809
Score = 2399 bits (1299), Expect = 0.0
Identities = 1422/1482 (96%), Gaps = 6/1482 (0%)
Strand=Plus/Plus
Query 7 TCTCTCTATCTCCAATGGAGTCCGCCGCACTATCCCGAATTGGTCTTGCCGGACTCGCCG 66
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 111 TCTCTCTATCTCCAATGGAGTCCGCCGCACTATCCCGAATCGGTCTCGCCGGACTCGCCG 170
Query 67 TAATGGGCCAGAACCTGGCCTTAAACATCGCCGAGAAAGGTTTCCCAATCTCAGTCTACA 126
| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 TGATGGGCCAAAACCTCGCCTTAAACATCGCCGAGAAAGGTTTCCCAATCTCAGTCTACA 230
Query 127 ATCGAACCACTTCCAAAGTCGACGAAACCCTAGATCGAGCCGCCGTCGAAGGAAACCTCC 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 231 ATCGAACCACTTCCAAAGTCGACGAAACCCTAGATCGAGCCGCCGTCGAAGGAAACCTCC 290
Query 187 CAGTCTCCGGCCAATACTC-CCCTCGCGATTTCGTCCTCTCGATCCAACGGCCTAGATCT 245
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 291 CAGTCTCCGGCCAATACTCTCCC-CGCGATTTCGTCCTCTCGATCCAACGGCCTAGATCT 349
Query 246 CTCATCATCCTCGTCAAAGCTGGAGCTCCCGTTGACCAAACAATCGACGCGTTCTCCGAG 305
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 350 CTCATCATCCTCGTCAAAGCTGGAGCTCCCGTTGACCAAACAATCGACGCCTTCTCCGAA 409
Query 306 TACATGGAGCCCGGAGATTGCATCATCGACGGTGGAAACGAATGGTATCAGAACACAGAG 365
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 410 TACATGGAGCCAGGAGATTGCATCATCGACGGTGGAAACGAATGGTATCAGAACACAGAG 469
Query 366 CGACGGATCTCCGAAGCAGAGCAAAAAGGATTGCTCTATTTAGGTATGGGAGTCTCCGGC 425
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 470 CGACGGATCTCCGAAGCTGAGCAAAAAGGATTGCTCTATTTAGGTATGGGAGTCTCCGGC 529
Query 426 GGCGAAGAAGGTGCTCGTAACGGTCCTTCGTTAATGCCTGGTGGATCATTTCAAGCTTAT 485
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 530 GGCGAAGAAGGAGCTCGTAACGGTCCTTCGTTAATGCCTGGTGGATCATTTCAAGCTTAT 589
Query 486 GATAACATTAAAGATATCTTGGGGAAAGTCGCAGCTCAAGTTGAAGATGGACCTTGTGTT 545
|||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 590 GATAACATCAAAGATATTTTGGAGAAAGTCGCAGCTCAAGTTGAAGATGGACCTTGTGTT 649
Query 546 ACATACATCGGAGAAGGTGGATCTGGAAATTTCGTGAAGATGGTTCATAATGGGATTGAG 605
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 ACTTACATCGGAGAAGGTGGATCTGGAAATTTCGTGAAGATGGTTCATAATGGGATTGAG 709
Query 606 TATGGAGATATGCAATTGATCTCTGAAGCGTATGATGTGTTGAAGAACGTTGGTGGTTTG 665
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 710 TATGGAGATATGCAATTGATCTCTGAAGCTTATGATGTGTTGAAGAACGTTGGTGGATTA 769
Query 666 AGCAATGAAGAGCTTGCGGAGATTTTCACGGAGTGGAAT-CGAGGTGAGCTTGAGAGTTT 724
||||| || |||||||| ||||||||||| ||||||||| | ||||||||||||||||||
Sbjct 770 AGCAACGAGGAGCTTGCTGAGATTTTCACTGAGTGGAATTC-AGGTGAGCTTGAGAGTTT 828
Query 725 CTTGGTTGAGATTACTTCGGATATATTTAGGGTTAAGGATGAGTTTGGTGATGGAGAGTT 784
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 829 CTTGGTTGAGATAACTTCTGATATATTTAGGGTTAAGGATGAGTTTGGTGATGGAGAGTT 888
Query 785 AGTTGATAAGATTTTGGATAAGACTGGTATGAAAGGTACCGGGAAATGGACGGTGCAGCA 844
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 889 AGTTGATAAGATTTTGGATAAGACTGGTATGAAAGGTACTGGGAAATGGACGGTGCAGCA 948
Query 845 AGCGGCGGAGCTGTCTGTGGCGGCTCCGACGATTGCTGCTTCGTTGGATTGTAGGTATTT 904
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 949 AGCGGCGGAGCTGTCTGTTGCAGCTCCGACGATTGCTGCTTCGTTGGATTGTAGGTATTT 1008
Query 905 GAGTGGATTGAAAGATGAGAGGGAGAATGCTGCCAAAGTGTTGAGGGAAGCTGGTTTGAA 964
|||||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct 1009 GAGTGGGTTGAAAGATGAGAGGGAGAATGCAGCGAAAGTGTTGAGGGAAGCTGGATTGAA 1068
Query 965 AGAAGAGATTGGTTCTGCGTCTAGCGGAATCGATAAGAAGAGATTGGTTGATGATGTTAG 1024
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1069 AGAAGAGATTGGTTCTGCGTCGAGTGGAATCGATAAGAAGAGATTGGTTGATGATGTTAG 1128
Query 1025 GCAAGCTTTGTATGCTTCGAAGATTTGTAGTTATGCTCAAGGGATGAATTTGCTTAGAGC 1084
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GCAAGCTTTGTATGCTTCCAAGATTTGTAGTTATGCTCAAGGGATGAATTTGCTTAGAGC 1188
Query 1085 TAAGAGTTTAGAGAA-AGGTTGGAACTTGAATTTCGGTGAATTGGCTAGGATTTGGAAAG 1143
||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||
Sbjct 1189 TAAGAGTTTAGAGAAGAG-TTGGAACTTGAATTTTGGTGAATTGGCTAGGATTTGGAAAG 1247
Query 1144 GTGGGTGTATTATAAGAGCGGTTTTCTTGGATAGGATCAAGAAAGCTTACCAGAGGAACC 1203
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 GTGGTTGTATTATAAGAGCGGTTTTCTTGGATAGGATCAAGAAAGCTTACCAGAGGAACC 1307
Query 1204 CGGATTTGGCGAGTCTTGTGGTTGATCCTGAGTTTGCTAAAGAGATGGTTCAGAGACAAG 1263
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 CGGACTTGGCTAGTCTTGTGGTTGATCCTGAGTTTGCTAAAGAGATGGTTCAGAGACAAG 1367
Query 1264 CTGCTTGGAGAAGAGTGGTGGGCTTGGCTGTTTCTGCAGGGATTAGCACGCCAGGAATGT 1323
|||||||||||||||| || || |||||||||||||| |||||||||||||| |||||||
Sbjct 1368 CTGCTTGGAGAAGAGTTGTTGGTTTGGCTGTTTCTGCTGGGATTAGCACGCCTGGAATGT 1427
Query 1324 GCGCGAGTCTTGCGTATTTCGATACTTATAGACGCGCTAGATTGCCGGCAAATCTGGTTC 1383
| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1428 GTGCTAGTCTTGCGTATTTCGATACTTATAGACGTGCTAGATTGCCGGCGAATCTGGTTC 1487
Query 1384 AGGCGCAGAGAGATCTCTTTGGAGCTCATACTTACGAGAGGACCGATCGTCCTGGTGCGT 1443
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 1488 AGGCGCAGAGAGATCTCTTTGGAGCTCACACTTATGAGAGAACCGATCGTCCTGGTGCGT 1547
Query 1444 ACCACACCGAATGGACCAAGCTTGCTAGGAAGAACAATTGAA 1485
|||| || |||||||| |||||||| ||||||||| ||||||
Sbjct 1548 ACCATACTGAATGGACTAAGCTTGCCAGGAAGAACCATTGAA 1589
> AT5G41670.1 | Symbols: | 6-phosphogluconate dehydrogenase family
protein | chr5:16665283-16667171 REVERSE LENGTH=1813
Length=1813
Score = 1762 bits (954), Expect = 0.0
Identities = 1304/1472 (89%), Gaps = 28/1472 (2%)
Strand=Plus/Plus
Query 19 CAATGGAGTCCGCCGCACTATCCCGAATTGGTCTTGCCGGACTCGCCGTAATGGGCCAGA 78
|||||||||||| ||| ||||| || || ||||| ||||| ||||| || ||||| || |
Sbjct 60 CAATGGAGTCCGTCGCTCTATCTCGCATAGGTCTCGCCGGTCTCGCAGTCATGGGACAAA 119
Query 79 ACCTGGCCTTAAACATCGCCGAGAAAGGTTTCCCAATCTCAGTCTACAATCGAACCACTT 138
|||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct 120 ACCTCGCCTTAAACATCGCCGATAAAGGATTCCCAATCTCCGTCTACAATCGAACCACTT 179
Query 139 CCAAAGTCGACGAAACCCTAGATCGAGCCGCCGTCGAAGGAAACCTCCCAGTCTCCGGCC 198
||||||||||||||||| ||||||| ||| || ||||||||| ||||||||| | || |
Sbjct 180 CCAAAGTCGACGAAACCTTAGATCGTGCCTCCAACGAAGGAAAACTCCCAGTCGCTGGTC 239
Query 199 AATACTCCCCTCGCGATTTCGTCCTCTCGATCCAACGGCCTAGATCTC-TCATCATCCTC 257
||||||| |||||||||||||| ||||||||||||||||||||||| | | ||||||||
Sbjct 240 AATACTCGCCTCGCGATTTCGTTCTCTCGATCCAACGGCCTAGATC-CGTTATCATCCTT 298
Query 258 GTCAAAGCTGGAGCTCCCGTTGACCAAACAATCGAC-GCGT-TCTCCGAGTACATGGAGC 315
|||||||| || ||||||||||||||||| ||| | || | |||| || ||||||||||
Sbjct 299 GTCAAAGCCGGTGCTCCCGTTGACCAAACCATC-TCTGC-TCTCTCTGAATACATGGAGC 356
Query 316 CCGGAGATTGCATCATCGACGGTGGAAACGAATGGTATCAGAACACAGAGCGACGGATC- 374
| || ||||| ||||||||||||||||| || ||||||||||||||||||||||| |||
Sbjct 357 CTGGTGATTGTATCATCGACGGTGGAAATGAGTGGTATCAGAACACAGAGCGACGAATCG 416
Query 375 TCCGAAGCAGAGCAA-AAAGGATTGCTCTATTTAGGTATGGGAGTCTCCGGCGGCGAAGA 433
| ||||| ||| || ||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 417 T-TGAAGCTGAG-AAGAAAGGATTGCTTTATTTAGGTATGGGAGTCTCCGGTGGTGAAGA 474
Query 434 AGGTGCTCGTAACGGTCCTTCGT-TAATGCCTGGTGGATCATTTCA-AGCTTATGATAAC 491
||| |||||||| |||||||| | | |||||||||||||| ||||| || ||| | ||
Sbjct 475 AGGAGCTCGTAATGGTCCTTC-TCTTATGCCTGGTGGATC-TTTCACTGCGTATAACAAT 532
Query 492 ATTAAAGATA-TCTTGGGGAAAGTCGCAGCTCAAGTTGAAGATGGACCTTGTGTTACATA 550
||||||||| |||| | |||||| || |||||||| |||||||| ||||||||||||||
Sbjct 533 GTTAAAGATATTCTT-GAGAAAGTTGCTGCTCAAGTCGAAGATGGTCCTTGTGTTACATA 591
Query 551 CATCGGAGAAGGTGGATCTGGAAATTTCGTGAAGATGGTTCATAATGGGATTGAGTATGG 610
||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||
Sbjct 592 CATTGGAGAAGGTGGATCTGGGAATTTTGTGAAAATGGTTCATAATGGGATTGAATATGG 651
Query 611 AGATATGCAATTGATCTCTGAAGCGTATGATGTGTTGAAGAACGTTGGTGGTTTGAGCAA 670
|||||||| |||| || || |||||||| |||||||||||||||||||| ||||| ||
Sbjct 652 TGATATGCAGCTGATTTCGGAGGCGTATGACGTGTTGAAGAACGTTGGTGGATTGAGTAA 711
Query 671 TGAAGAGCTT-GCGGAGATTTTCACGGAGTGGAATCGAGGTGAGCTTGAGAGTTTCTTGG 729
||| || || || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 712 TGATGA-ATTGGCTGAGATCTTCACGGAGTGGAATCGAGGTGAGCTTGAGAGTTTCTTGG 770
Query 730 TTGAGATTACTTCGGATATATTTAGGGTTAAGGATGAGTT-TGGTGATGGAGAGTTAGTT 788
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 771 TTGAGATTACTTCGGATATATTTAGGGTTAAGGATGA-TTATGGTGATGGAGAGTTAGTG 829
Query 789 GATAAGATTTTGGATAAGACTGGTATGAAAGGTACCGGGAAATGGACGGTGCAGCAAGCG 848
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct 830 GATAAGATTTTGGATAAGACTGGTATGAAAGGTACAGGGAAATGGACGGTTCAGCAGGCG 889
Query 849 GCGGAGCTGTCTGTGGCGGCTCCGACGATTGCTGCTTCGTTGGATTGTAGGTATTTGAGT 908
|| ||||| ||||| ||||| || ||||||||||| |||||||||||||| || ||||||
Sbjct 890 GCTGAGCTTTCTGTTGCGGCGCCTACGATTGCTGCGTCGTTGGATTGTAGATACTTGAGT 949
Query 909 GGATTGAAAGATGAGAGGGAGAATGCTGCCAAAGTGTTG-AGGGAAGCTGGTTTGAAAGA 967
|||||||| |||||||||||||||||||| ||||| ||| | | ||||||| ||||| ||
Sbjct 950 GGATTGAAGGATGAGAGGGAGAATGCTGCTAAAGTTTTGGAAG-AAGCTGGATTGAAGGA 1008
Query 968 AGAGATTGGTTCTGCGTCTAGCGGAATCGATAAGAAGAGATTGGTTGATGATGTTAGGCA 1027
|| || |||||||||||| | || | ||||||||||| ||| |||||||||| |||||
Sbjct 1009 GGATATCGGTTCTGCGTCTCGTGGTGTTGATAAGAAGAGGTTGATTGATGATGTGAGGCA 1068
Query 1028 AGCTTTGTATGCTTCGAAGATTTGTAGTTATGCTCAAGGGATGAATTTGCTTAGAGCTAA 1087
||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1069 AGCTTTGTATGCTTCTAAGATCTGTAGTTATGCTCAAGGGATGAATTTGCTTAGGGCTAA 1128
Query 1088 GAGTTTAGAGAAAGGTTGGAACTTGAATTTCGGTGAATTGGCTAGGATTTGGAAAGGTGG 1147
||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct 1129 GAGTTTAGAGAAAGGTTGGGACTTGAATTTGGGTGAAATGGCTAGGATTTGGAAAGGTGG 1188
Query 1148 GTGTATTATAAGAGCGGTTTTCTTGGATAGGATCAAGAAAGCTTACCAGAGGAACCCGGA 1207
||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| |
Sbjct 1189 GTGTATTATCAGGGCGGTTTTCTTGGACAGGATCAAGAAAGCTTACCAGAGAAACCCGAA 1248
Query 1208 TTTGGCGAGTCTT-GTGGTTGATCCTGAGTTTGCTAAAGAGATGGTTCAGAGACAAGCTG 1266
||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1249 TTTGGCGAG-CTTAGTGGTTGATCCTGATTTTGCTAAAGAGATGGTTCAGAGGCAAGCTG 1307
Query 1267 CTTGGAGAAGAGTGGTGGG-CTTGGCTGTTTCTGCAGGGATTAGCACGCCAGGAATGTGC 1325
| ||||| ||||||||||| |||| || | ||||| ||||||||||| ||||||||||||
Sbjct 1308 CATGGAGGAGAGTGGTGGGTCTTG-CTATATCTGCTGGGATTAGCACACCAGGAATGTGC 1366
Query 1326 GCGAGTCTT-GCGTATTTCGATACTTATAGACGCGCTAGATTGCCGGCAAATCTGGTTCA 1384
|| ||| || ||||||||||| ||||| || || |||||||| || || |||||||||||
Sbjct 1367 GCAAGT-TTAGCGTATTTCGACACTTACAGGCGTGCTAGATTACCTGCGAATCTGGTTCA 1425
Query 1385 GGCGCAGAGAGATCTCTTTGGAGCTCATACTTACGAGAGGACCGATCGTCCTGGTGCGTA 1444
|||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 1426 GGCGCAGAGAGATCTCTTTGGAGCTCATACATATGAGAGAACCGATCGTCCTGGTGCATA 1485
Query 1445 CCACACCGAATGGACCAAGCTTGCTAGGAAGA 1476
|||||| |||||||| |||||||| |||||||
Sbjct 1486 CCACACTGAATGGACTAAGCTTGCAAGGAAGA 1517
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74196405510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5