BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924637
Length=2467
Score E
Sequences producing significant alignments: (Bits) Value
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 3659 0.0
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prot... 3461 0.0
> AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463069-23466451 REVERSE LENGTH=2612
Length=2612
Score = 3659 bits (1981), Expect = 0.0
Identities = 2297/2446 (94%), Gaps = 36/2446 (1%)
Strand=Plus/Plus
Query 21 ATGTACTCGTTAATTCTCCGGGAACGATCTGGATCCTTCACAGGGTCCTTATGGAGCCGA 80
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct 1 ATGTACTCGTTAATTCTCCGGGAAAGATCTGGATCCATCACAGGGTCCTTATGGAACCGA 60
Query 81 ATCTTCTCACGGAACATGGGTGGTGGTCCGAGAACCTTTCCTGGAGGACTGAACAAGTGG 140
|| | ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 61 ATATCCTCTCGGAACATGGGTGGTGGTCCGAGAACCTTCCCTGGAGGACTAAACAAGTGG 120
Query 141 CAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 200
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CAGTGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAGAACAAGCTCTTGGATCAA 180
Query 201 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGTAAT 260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 181 GAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGAGCTAAAATGTGGGGAAAT 240
Query 261 CCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAAAGTCACGGACCAATGAGCCCGAAA 320
|||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 241 CCAGATTCTGGTGAGAAAACGGCGAAATCGAAGCAGAGTCATGGACCAATGAGCCCGAAA 300
Query 321 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAAGATTTGTGGAAC 380
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 301 GAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGAGCAGAGGATTTTTGGAAC 360
Query 381 GAGAACGATGGGCCGATGAAGGAATCAGATGATGGATGGGGATTATCTCGTAGGGATAAT 440
||||||||||| ||| ||||| |||||||| | | ||| || | |
Sbjct 361 GAGAACGATGGTCCGGTGAAGAAATCAGATCA---A--GGG------TC-----G---A- 400
Query 441 GGACGGTCAGGTTCGAATTCGATTGATTCTTCTTCTAATTCGTCTATTGATGTGAGGAAG 500
|| ||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 401 -GA---TCAGGTTCGGATTCGATTGATTCTACTTCTAATTCGCCTATTGATGTGAGG-AG 455
Query 501 -TTAGTTAGTGGGACATGTTATTCAATGGGTAATAGTCGGGTTTTCGATCGTAGTAGGAG 559
|||||| || ||||||| |||| |||||||| | ||| ||||||| | ||||||||||
Sbjct 456 ATTAGTTTCTGCGACATGTGATTCTATGGGTAAAAATCGTGTTTTCGGTAGTAGTAGGAG 515
Query 560 AGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 619
|||||||||||| | | | || |||||||||||||||||||||||||||||||||||||
Sbjct 516 AGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATGAGAGTTCTTGTGATGAAGG 569
Query 620 AGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCGGG 679
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 570 AGATGACTTTGATGCTAAAAAGCTAGATACTTTGAGTCCTTTTTCTCCTAAATTTGCTGG 629
Query 680 TACCAAGGAGAAAGTGAAGAGCTCGAAGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 739
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 630 TACCAAGGAGAAAGTGAAGAGCTCGAGGAGTGTTGTTGGAGTTATAAGGAACAAAGGTTT 689
Query 740 GTTTGGGAGAAGGAAGTTTAGGAAGAATGATAGTTCTACTGAAGAGGATTCAGAGGAAGA 799
|||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||
Sbjct 690 GTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTGAAGAGGATTCAGATGAAGA 749
Query 800 AGGCGAAGAGGGAAAGATGA-ACGTTTGGTTGGATTTGAGGAAAATGGGAAGCAGTGCGG 858
|||||| ||||||||||||| | | |||| ||||| ||||||||| |||||||||||||
Sbjct 750 AGGCGATGAGGGAAAGATGATA-GGTTGGATGGATATGAGGAAAACGGGAAGCAGTGCGT 808
Query 859 CCTTAGGAAACCATGATATCAAACTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAG 918
| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 809 CGTTAGGGAACCACGATATCAAGCTGACGAAAAGAGTGAATCGTAATGTCACGGATGAAG 868
Query 919 AGCTTTATCCTCCTTTGGATATTAATACAGTCAGAGAAGATCTTAGTAAAAGAAAATCTG 978
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 869 AGCTTTATCCTCCTTTGGATATTAATACAGTTAGAGAAGATCTCAGTAAAAGAAAATCTG 928
Query 979 TGGATAATGTAATGGAGGAGAACCGAGAGCCTCATGACTCGATTTACAGTGGAAAAAGAT 1038
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 929 TGGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACTCGATTTACAGTGCAAAAAGAT 988
Query 1039 TTGATGAGTCTAGTATATCTCCTTTGACGCTAAAGGCGCTTTCTGTGTCTGGCATTGTTA 1098
||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||
Sbjct 989 TTGATGAGTCTTGTATATCTCCTTTGACGCTAAAGGCACTTTCTGCGTCTGGCATTCTTA 1048
Query 1099 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGATGGTAAAGATGCATTAG 1158
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1049 AGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCCTAGACGGTAAAGATGCATTAG 1108
Query 1159 TCAAAGCCAAAACCGGGACAGGAAAAAGCATGGCGTTTTTGCTTCCTGCAATTGAAACAG 1218
||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1109 TCAAAGCCAAAACTGGGACGGGAAAGAGCATGGCGTTTTTGCTTCCTGCAATTGAAACAG 1168
Query 1219 TTCTGAAAGCTATGAACAGCGGTAATGGCGTTCACAAAGTTGCTCCGATTTTTGCTCTTA 1278
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 1169 TTCTGAAAGCTATGAACAGCGGTAAGGGCGTTAACAAAGTTGCTCCGATTTTTGCTCTTA 1228
Query 1279 TCCTCTGCCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTGCTCA 1338
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1229 TCCTCTGTCCCACAAGAGAACTTGCAAGCCAGATCGCTGCAGAGGGCAAGGCTCTACTCA 1288
Query 1339 AATACCATGACGGGATCGGTGTTCAGACTCTAATTGGTGGTACCCGCTTCAAACTTGATC 1398
||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1289 AATTCCATGACGGGATTGGTGTTCAGACTCTAATTGGTGGTACACGCTTCAAACTTGATC 1348
Query 1399 AGCAACGCCTAGAATCTGAGCCATGCCAGATACTAATTGCAACTCCGGGAAGACTCTTGG 1458
| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1349 AACAACGCCTAGAATCTGAGCCATGTCAGATACTAATAGCAACTCCGGGAAGACTCTTGG 1408
Query 1459 ATCATATAGAGAATAAGTCTGGGTTAACATCGCGTTTGATGGCGCTGAAATTGTTTATAG 1518
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1409 ATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGATGGCGCTTAAATTGTTTATAG 1468
Query 1519 TTGATGAGGCTGATCTTTTACTTGACTTAGGATTTAGGAGAGATGTCGAAAAAATCATTG 1578
|||| |||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |
Sbjct 1469 TTGACGAGGCTGACCTTTTGCTAGACTTAGGATTCAGGAGAGATGTCGAAAAAATCATAG 1528
Query 1579 ATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCCGCAACCATTCCAAAAGAGGTCC 1638
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1529 ATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCTGCAACCATTCCGAAAGAGGTCC 1588
Query 1639 GTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGTCTTG 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1589 GTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTTATATCGACACAATCGGGCTCG 1648
Query 1699 GTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTATTGTTGCTCCACACGAATCTC 1758
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1649 GTTGTGTAGAGACTCATGATAAGGTGAGGCAATCTTGTATTGTTGCTCCACACGAATCTC 1708
Query 1759 ATTTCCACTTGGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTACAAGA 1818
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1709 ATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCAACAACACGCCTGATTATAAGA 1768
Query 1819 TAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTGCTCCGGGAAA 1878
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1769 TAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGATGTATACTCTACTCCGGGAAA 1828
Query 1879 TGAAATTGAGCGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTAT 1938
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1829 TGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTCAGCTCCATAGAACACGTGTAT 1888
Query 1939 CAGACGAGTTTAAGGAATCAAAAAGACTGATT-TTGGTCACATCTGATGTATCTGCTCGT 1997
|||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct 1889 CAGACGAGTTTAAGGAATCAAATAGACTGATTCTT-GTCACATCTGATGTATCTGCTCGT 1947
Query 1998 GGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACCGAGTGACAGAGAA 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1948 GGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTCGGTATACCGAGTGACAGAGAA 2007
Query 2058 CAGTATATACATCGGCTTGGTAGAACCGGGAGAGAAGGCAAAGGAGGTGAAGGATTGCTT 2117
|||||||||||||| || |||||||| || |||||||| |||||||| ||||||||||||
Sbjct 2008 CAGTATATACATCGACTAGGTAGAACTGGAAGAGAAGGAAAAGGAGGAGAAGGATTGCTT 2067
Query 2118 TTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCTCTTGAGCCA 2177
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2068 TTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCTTAAAGATTTGCCACTTGAACCA 2127
Query 2178 ATTCCAGTTCCAGATCTTGATTCAAGAGTTAAACTTCAGATTGATCAGTCTATGGCTAAG 2237
||||||| ||| ||||||||||||| |||||||| |||| |||||||||| |||||||||
Sbjct 2128 ATTCCAGCTCCGGATCTTGATTCAATAGTTAAACATCAGGTTGATCAGTCGATGGCTAAG 2187
Query 2238 ATTGATACAAGTATTAAAGAAGCAGCGTACCATGCTTGGCTCGGTTATTACAACTCGGTT 2297
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2188 ATTGATACAAGTATCAAAGAAGCAGCGTACCATGCATGGCTCGGTTATTACAACTCGGTT 2247
Query 2298 AGAGAAACCGGTAGAGACAAAACCACGTTGGCCGAGTTAGCTAACCGGTTTTGCCATTCT 2357
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2248 CGAGAAACCGGTAGAGACAAAACCACGTTAGCCGAGTTAGCTAATCGGTTTTGCCATTCT 2307
Query 2358 ATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACGGCGGTTAAGATGGGTCTCAAA 2417
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2308 ATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAACCGCGGTTAAGATGGGTCTCAAA 2367
Query 2418 GGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCCGGGTTGGT 2463
||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 2368 GGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCTGTGTTGGT 2413
> AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576465-3580525 FORWARD LENGTH=2685
Length=2685
Score = 3461 bits (1874), Expect = 0.0
Identities = 2240/2409 (93%), Gaps = 55/2409 (2%)
Strand=Plus/Plus
Query 64 GGTCCTTATGGAGCCGAATCTTCTCACGGAACATGGGTGGTGGTCCGAGAACCTTT-CCT 122
|||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||| |||
Sbjct 212 GGTCCTTATGGAACCGAATATTCTCTCGGAACATGGGTGGTGGTCCGAGAA-CTTTCCCT 270
Query 123 GGAGGACTGAACAAGTGGCAATGGAAACGTATGCACGAGAAGAAAGCTAGAGAGAAAGAG 182
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 271 GGAGGACTAAACAAGTGGCAATGGAAACGTATGCACGAGAAGAAAGCAAGAGAGAAAGAG 330
Query 183 AACAAGCTCTTGGATCAAGAGAAACAGCTTTACGAAGCTCGAATTAGGACCGAGATCCGA 242
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 331 AACAAGCTCTTGGATCAAGAGAAACAGCTTTACGAAGCTCGAATTCGGACCGAGATCCGA 390
Query 243 GCTAAAATGTGGGGTAATCCAGATTCCGGCGAGAAAACGGCGAAATCGAAGCAAAGTCAC 302
||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||
Sbjct 391 GCTAAAATGTGGGGTCATCCAGATTCCGGTGAGAAAACGGCGAAATTGAAGCAGAGTCAT 450
Query 303 GGACCAATGAGCCCGAAAGAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGA 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 451 GGACCAATGAGCCCGAAAGAACATATCAAAACCTTGGCTGATCGGTTTATGAAAGCTGGT 510
Query 363 GCAGAAGATTTGTGGAACGAGAACGATGGGCCGATGAAGGAATCAGATGATGGATGGGGA 422
||||| |||||||||||||| |||||||| ||| |||| | | | || | | |
Sbjct 511 GCAGATGATTTGTGGAACGATAACGATGGTCCGGTGAA-G-A--A-AT--T---T---G- 556
Query 423 TTATCTCGTAGGGATAATGGACGGTCAGGTTCGAATTCGATTGATTCTTCTTCTAATTCG 482
| || |||| | || | ||| ||||| |||| ||||| |||| | | |
Sbjct 557 --A--TC-AAGGG----TCGA-GATCATGTTCGGATTCAATTGA---TTCTAC--A--C- 598
Query 483 TCTATTGATGTGAGGAAG-TTAGTTAGTGGGACATGTTATTCAATGGGT-AATAGTCGGG 540
|||||||||||||| || |||||| || ||||||| ||||||||||| || | ||| |
Sbjct 599 -CTATTGATGTGAGG-AGATTAGTTTCTGCGACATGTGATTCAATGGGTAAACA-TCGTG 655
Query 541 TTTTCGATCGTAGTAGGAGAGGTTTTTCGAGTATGAGTAGAGGTAGATTTAAGAGAAATG 600
|||| ||| |||||||||||||||||||||| | | | || ||||||||||||||||||
Sbjct 656 TTTTGGATAGTAGTAGGAGAGGTTTTTCGAG--T-A-T-GA-GTAGATTTAAGAGAAATG 709
Query 601 AGAGTTCTTGTGATGAAGGAGATGACTTTGATGCTAAAAAGTTAGATACTTTGAGTCCTT 660
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 710 AGAGTTCTTGTGATGAAGGAGATGACGTTGATGCTAAAAAGTTAGATACTTTGAGTCCTT 769
Query 661 TTTCTCCTAAATTTGCGGGTACCAAGGAGAAAGTGAAGAGCTCGAAGAGTGTTGTTGGAG 720
|||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 770 TTTCTCCTAAATTTTCTGGTACCAAGGAGAAAGTGAAGAGCTCGACGAGTGTTGTTGGAG 829
Query 721 TTATAAGGAACAAAGGTTTGTTTGGGAGAAGGAAGTTTAGGAAGAATGATAGTTCTACTG 780
||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct 830 TTATAAGGAACAAAGGTTTGTTTGGAAGAAGGAAGTTTAGGAAGAACGATAGTTCAACTG 889
Query 781 AAGAGGATTCAGAGGAAGAAGGCGAA-GAGGGAAAGATGA-ACGTTTGGTTGGATTTGAG 838
||||||||||||| ||||||||| || ||||||||||||| | | |||| ||||||||||
Sbjct 890 AAGAGGATTCAGATGAAGAAGGC-AATGAGGGAAAGATGATA-GGTTGGATGGATTTGAG 947
Query 839 GAAAATGGGAAGCAGTGCGGCCTTAGGAAACCATGATATCAAACTGACGAAAAGAGTGAA 898
||||| |||||||||||| | ||||||||||| |||||||| |||||||||||||||||
Sbjct 948 GAAAACAGGAAGCAGTGCGTCGTTAGGAAACCACGATATCAAGCTGACGAAAAGAGTGAA 1007
Query 899 TCGTAATGTCACGGATGAAGAGCTTTATCCTCCTTTGGATATTAATACAGTCAGAGAAGA 958
|||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1008 TCGTAATGTCACAGACGAAGAGCTTTATCCTCCTTTGGATATTAATAGAGTTAGAGAAGA 1067
Query 959 TCTTAGTAAAAGAA-AATCTGTGGATAATGTAATGGAGGAGAACCGAGAGCCTCATGACT 1017
||| ||||||| || |||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 1068 TCTCAGTAAAA-AACAATCTGTGGATAATGTAATGGAGGAGAAGCAAGAGCCTCATGACT 1126
Query 1018 CGATTTACAGTGGAAAAAGATTTGATGAGTCTAGTATATCTCCTTTGACGCTAAAGGCGC 1077
|||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 1127 CGATTTACAGTGCAAAAAGATTTGATGAGTCTTGTATATCTCCTTTGACGCTTAAGGCGC 1186
Query 1078 TTTCTGTGTCTGGCATTGTTAAGATGACTAGAGTACAGGATGCCACTCTCTCTGAGTGCC 1137
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1187 TTTCTGCGTCTGGCATTGTTAAGATGACTAGAGTGCAGGATGCCACTCTCTCTGAGTGCC 1246
Query 1138 TAGATGGTAAAGATGCATTAGTCAAAGCCAAAACCGGGACAGGAAAAAGCATGGCGTTTT 1197
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1247 TAGACGGTAAAGATGCATTAGTCAAAGCCAAAACCGGGACGGGAAAGAGCATGGCGTTTT 1306
Query 1198 TGCTTCCTGCAATTGAAACAGTTCTGAAAGCTATGAACAGCGGTAATGGCGTTCACAAAG 1257
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1307 TGCTTCCTGCAATTGAAACAGTTCTGAAAGCTATGAACAGCGGTAAGGGCGTTCACAAAG 1366
Query 1258 TTGCTCCGATTTTTGCTCTTATCCTCTGCCCCACAAGAGAACTTGCAAGCCAGATCGCTG 1317
||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1367 TTGCTCCGATTTTTGTTCTTATCCTCTGTCCTACAAGAGAACTTGCAAGCCAGATCGCTG 1426
Query 1318 CAGAGGGCAAGGCTCTGCTCAAATACCATGACGGGATCGGTGTTCAGACTCTAATTGGTG 1377
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1427 CAGAGGGCAAGGCTCTGCTCAAAAACCATGACGGGATCGGTGTTCAGACTCTAATTGGTG 1486
Query 1378 GTACCCGCTTCAAACTTGATCAGCAACGCCTAGAATCTGAGCCATGCCAGATACTAATTG 1437
|||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1487 GTACGCGCTTCAGACTTGATCAACAACGCCTAGAATCTGAGCCATGCCAGATACTAATAG 1546
Query 1438 CAACTCCGGGAAGACTCTTGGATCATATAGAGAATAAGTCTGGGTTAACATCGCGTTTGA 1497
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1547 CAACTCCGGGAAGACTCTTGGATCATATAGAGAATAAGTCTGGCTTAACATCGCGTTTGA 1606
Query 1498 TGGCGCTGAAATTGTTTATAGTTGATGAGGCTGATCTTTTACTTGACTTAGGATTTAGGA 1557
|||| || ||||||||||||||||| ||||||||||| || || ||||||||||| | ||
Sbjct 1607 TGGCCCTTAAATTGTTTATAGTTGACGAGGCTGATCTATTGCTAGACTTAGGATTCAAGA 1666
Query 1558 GAGATGTCGAAAAAATCATTGATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCCG 1617
||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 GAGATGTTGAAAAGATCATAGATTGTTTGCCTCGTCAGAGACAATCTCTTCTCTTTTCCG 1726
Query 1618 CAACCATTCCAAAAGAGGTCCGTCGAGTCTCACAGCTTGTTTTGAAAAGGGATCACTCTT 1677
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1727 CAACCATTCCAAAAGAGGTCCGTCGAGTCTCACAACTTGTTTTAAAAAGGGATCACTCTT 1786
Query 1678 ATATCGACACAATCGGTCTTGGTTGTGTAGAGACTCATGATAAGGTGAAGCAATCTTGTA 1737
|||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1787 ATATCGACACAATCGGGCTCGGTTGTGTAGAAACTCATGATAAGGTGAAGCAATCTTGTA 1846
Query 1738 TTGTTGCTCCACACGAATCTCATTTCCACTTGGTACCTCATCTTCTAAAAGAGCACATCA 1797
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1847 TTGTTGCTCCACACGAATCTCATTTCCACTTAGTACCTCATCTTCTAAAAGAGCACATCA 1906
Query 1798 ACAACACGCCTGATTACAAGATAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGA 1857
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 ACAACATGCCTGATTATAAGATAATAGTCTTTTGCTCAACCGGTATGGTAACATCACTGA 1966
Query 1858 TGTATACTCTGCTCCGGGAAATGAAATTGAGCGTTAGGGAGATTCATGCTAGAAAACCTC 1917
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1967 TGTACACTCTGCTCCGGGAAATGAAATTGAACGTTAGGGAGATTCATGCTAGAAAACCTC 2026
Query 1918 AGCTCCATAGAACACGTGTATCAGACGAGTTTAAGGAATCAAAAAGACTGATT-TTGGTC 1976
|||||||||||||| |||||||||||||||||||||||||||| ||||| ||| || |||
Sbjct 2027 AGCTCCATAGAACATGTGTATCAGACGAGTTTAAGGAATCAAATAGACTTATTCTT-GTC 2085
Query 1977 ACATCTGATGTATCTGCTCGTGGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTC 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2086 ACATCTGATGTATCTGCTCGTGGAATGAACTATCCAGATGTTACTTTGGTTATTCAGGTC 2145
Query 2037 GGTATACCGAGTGACAGAGAACAGTATATACATCGGCTT-GGTAGAACCGGGAGAGAAGG 2095
|||||||||||||||||||||||||||||||||||| || |||||||| || ||||||||
Sbjct 2146 GGTATACCGAGTGACAGAGAACAGTATATACATCGG-TTAGGTAGAACTGGAAGAGAAGG 2204
Query 2096 CAAAGGAGGTGAAGGATTGCTTTTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCT 2155
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205 AAAAGGAGGAAAAGGATTGCTTTTGATTGCGCCATGGGAGAGATATTTTCTTGATGAGCT 2264
Query 2156 TAAAGATTTGCCTCTTGAGCCAATTCCAGTTCCAGATCTTGATTCAAGAGTTAAACTTCA 2215
||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct 2265 TAAAGATTTACCTCTTGAACCAATTCCAGCTCCAGATCTTGATTCAAGAGTTAAACATCA 2324
Query 2216 GATTGATCAGTCTATGGCTAAGATTGATACAAGTATTAAAGAAGCAGCGTACCATGCTTG 2275
| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2325 GGTTGATCAGTCAATGGCTAAGATTGATACAAGTATCAAAGAAGCAGCGTACCATGCATG 2384
Query 2276 GCTCGGTTATTACAACTCGGTTAGAGAAACCGGTAGAGACAAAACCACGTTGGCCGAGTT 2335
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2385 GCTCGGTTATTACAACTCGGTTCGAGAAACCGGTAGAGACAAAACCACGTTGGCCGAGTT 2444
Query 2336 AGCTAACCGGTTTTGCCATTCTATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAAC 2395
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2445 AGCTAATCGGTTTTGCCATTCTATCGGTTTAGAGAAACCTCCTGCTTTGTTTCGAAGAAC 2504
Query 2396 GGCGGTTAAGATGGGTCTCAAAGGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCC 2455
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2505 CGCGGTTAAGATGGGTCTTAAAGGTATTTCTGGTATTCCAATCCGAAAATAAACCGACCC 2564
Query 2456 GGGTTGGTA 2464
| |||||||
Sbjct 2565 GTGTTGGTA 2573
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122407340920
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5