BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924690 Length=819 Score E Sequences producing significant alignments: (Bits) Value AT1G62980.1 | Symbols: ATEXPA18, EXP18, ATEXP18, ATHEXP ALPHA 1... 1279 0.0 > AT1G62980.1 | Symbols: ATEXPA18, EXP18, ATEXP18, ATHEXP ALPHA 1.25, EXPA18 | expansin A18 | chr1:23331676-23333110 FORWARD LENGTH=1002 Length=1002 Score = 1279 bits (692), Expect = 0.0 Identities = 777/819 (95%), Gaps = 2/819 (0%) Strand=Plus/Plus Query 1 CCCTCAAGAAAACAGAGTAAAAATGGATCAAAATTTGTATCGCAAGTGCTTGGTTATTTT 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 31 CCCTCAAGAAAACAGAGTAAAAATGGATCAAAATTTGTATCGCAAGTGCCTGGTTATTTT 90 Query 61 ATCAATGATGGCACTGATCGGCACATCAATGGCGGCATATGCGGGGACCCCATGGCGTAC 120 ||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 91 ATCGATGATGGCAATGATCGGCACATCAATGGCTACATATGCCGGGACCCCATGGCGTAC 150 Query 121 GGCCTCAGCCACTTTTTACGGTGATGAGACCGGCAGCGCAACTATGGGTGGGGCTTGTGG 180 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 151 AGCCTCAGCCACTTTTTACGGTGACGACACCGGCAGCGCAACTATGGGTGGGGCTTGTGG 210 Query 181 CTATGGTAACATGTGGGACAGCGGCTACGGCGTAGCCACGACTGCTCTGAGCACAGCTCT 240 |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| || Sbjct 211 CTATGGTAACATGTATGACAGCGGCTACGGGGTAGCCACGACTGCGCTGAGCACAGCCCT 270 Query 241 GTTCAACGACGGTTATGCATGCGGTCAATGTTTCCAGATAAGGTGTGTGTCATCGCCTAA 300 ||||||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||||| Sbjct 271 GTTCAACGAGGGTTATGCATGCGGTCAATGTTTCCAGTTAAAGTGTGTGTCGTCGCCTAA 330 Query 301 CTGCTACTACGGTTCACCAGCCACCGTGGTGACTGCCACCAACATATGTCCACCAAATTA 360 |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 331 CTGCTACTACGGGTCACCAGCCACCGTGGTAACTGCAACCAACATATGTCCACCAAATTA 390 Query 361 TGGCCAAGCTTCCAACAATGGTGGATGGTGTAATCCACCACAAGTCCATTTTGATTTGGC 420 ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct 391 TGGCCAAGCATCCAACAATGGTGGATGGTGTAATCCGCCACGAGTCCATTTTGATTTGAC 450 Query 421 TAAACCAGCTTTCATGAAGATCGCTAATTGGAAGGCTGGTATCATCCCCCTCTCATACCG 480 |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| || Sbjct 451 TAAACCAGCTTTTATGAAGATCGCTAACTGGAAGGCTGGTATCATCCCCGTCTCATATCG 510 Query 481 CAGAGTGGCATGTAAG-AGAACCGGAGGAATAAGGTTTAAATTTGAAGGAAATGGGTATT 539 |||||||||||||||| || | ||||||||||||||| ||||||||||||||||| |||| Sbjct 511 CAGAGTGGCATGTAAGAAG-ATCGGAGGAATAAGGTTCAAATTTGAAGGAAATGGATATT 569 Query 540 GGCTACTTGTGTACGTGATGAACGTAGGTGGTGCAGGTGACATCAAGACCATGGCCGTGA 599 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 570 GGCTACTTGTGTACGTGATGAACGTAGGTGGTCCAGGTGACATCAAGACCATGGCCGTTA 629 Query 600 AAGGTAGCCGCACAGGCTGGATCAACATGAGCCATAATTGGGGAGCTTCGTACCAAGCCT 659 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 630 AAGGTAGCCGCACAGGGTGGATCAACATGAGCCATAACTGGGGAGCTTCGTACCAAGCCT 689 Query 660 TTTCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACACCACTCGTCAGA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 TTTCTTCTCTCTACGGTCAGTCTCTCTCGTTCCGGCTCACCTCTTACACCACTCGTCAGA 749 Query 720 CCATTTACGCTTATAATGCTGCTCCGGCTAGCTGGAGCGCCGGCAAGACCTACCAGAGCA 779 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 750 CCATTTACGCTTATAATGCTGCTCCGGCAAGCTGGAGCGCGGGCAAGACCTACCAGAGCA 809 Query 780 AGGCTAATTTTAGCTGATTTAGGTCATATTCAATTCCGA 818 |||||||||||| || ||||||||||||||||||||||| Sbjct 810 AGGCTAATTTTAACTAATTTAGGTCATATTCAATTCCGA 848 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 39885912718 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5