BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924746 Length=1462 Score E Sequences producing significant alignments: (Bits) Value AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 1110 0.0 AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 974 0.0 AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 917 0.0 AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 773 0.0 AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 638 0.0 AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 396 4e-109 > AT1G62150.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22970029-22971764 REVERSE LENGTH=1736 Length=1736 Score = 1110 bits (601), Expect = 0.0 Identities = 1126/1368 (82%), Gaps = 81/1368 (6%) Strand=Plus/Plus Query 58 AGTTACATAAATGGCGTAACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTG 117 |||| || ||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 216 AGTTTCAGAAAGGGCGTGACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTG 275 Query 118 CTTTTTCC-A---ATTC-CTTC---TCCT-CTGCTGCTGATGTGAGCCTTAGAGATGGTC 168 ||||||| | |||| |||| | || ||||||||||||||||| |||||||| ||| Sbjct 276 TTTTTTCCAATTCATTCTCTTCTGTTGCTACTGCTGCTGATGTGAGCTTTAGAGATAGTC 335 Query 169 GAAAAGGTAAGAACTTTACAATCTCTTACCTTGTTGATTCATTGGGTTTACCTAT-AAAG 227 |||||||||| |||||||| |||||||||| |||||||||||||||||| || | |||| Sbjct 336 GAAAAGGTAACAACTTTACTGTCTCTTACCTCGTTGATTCATTGGGTTTAGCT-TCAAAG 394 Query 228 CTCGCAGGATCGATTTCAAGGAAAGTCAGGTTT-GAGAACAAGGCCAATCCCGATTCTGT 286 ||||||| |||||| || | |||||||| |||| |||||||||| |||||| ||| | || Sbjct 395 CTCGCAGAATCGATCTCGATGAAAGTCA-GTTTCGAGAACAAGGGCAATCCTGATACAGT 453 Query 287 TCTGAGTCTTCTGAGAAGTCATGGGTTCACAGATTCTCAGATCTCCACCATGATTACGAA 346 ||||| |||||| |||||||||| ||||||||||||||||||||||| ||| ||| || | Sbjct 454 TCTGAATCTTCTTAGAAGTCATGAGTTCACAGATTCTCAGATCTCCAGCATCATTTCGGA 513 Query 347 TTACCCACCATTGCTTATATTAGATGCTGAGAAA-TCACTTGCTCCCAAGTTTCAGTTTT 405 ||| ||| |||||||| || ||||||||| ||| ||||||| ||||||| ||| ||| Sbjct 514 TTATCCAACATTGCTTGTAGCAGATGCTGA-AAATTCACTTGGTCCCAAGCTTCTGTTGA 572 Query 406 TGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTCAGATTGTTTCTACAGTTCCGGAAA 465 ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||| Sbjct 573 TGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAA 632 Query 466 TCTTGGGAAAGAGAGGGGACAAAACTCTCAGCTTATGCTATGATTTTGTCAAAGAGAGTT 525 |||| |||| || ||||||||||| | || || || ||||||| | |||||||||| || Sbjct 633 TCTTAGGAATGAAAGGGGACAAAAGTATCGGCAGATACTATGATATCGTCAAAGAGA-TT 691 Query 526 -TAGTAGCGGATAAGAGTTCCAAGTTGGAAAAGTTGTGTCATTCTTTGCCACA-GG--GT 581 ||| |||||||||||| |||||||| |||||| |||||||||||||||| | || || Sbjct 692 ATAGAAGCGGATAAGAGCTCCAAGTTCGAAAAGCTGTGTCATTCTTTGCCTGAGGGTAGT 751 Query 582 AAGCAGGAGGATAAAATCAGAAATGTATCGGTTTTGAGAGAATTGGGCATGCCTCACAA- 640 ||||||||| |||||||||| ||||||| |||||||||||| ||||| ||||||| || Sbjct 752 AAGCAGGAGAATAAAATCAGGAATGTATTGGTTTTGAGAGATTTGGGTGTGCCTCA-AAG 810 Query 641 GTTGTTATTCTCCTTGCTTACATCCGT-TGGTCAACC-TG--T-ATGTGGAAAAG-ATAG 694 |||||||||||| |||| | | | | | | || ||| || | |||||||||| | || Sbjct 811 GTTGTTATTCTCATTGC-T-C-TTC-TCTAATC-ACCATGTCTGCTGTGGAAAAGAAAAG 865 Query 695 ATTTGATGCATCCCTCAAGAAGATAGTTGAGATGGGTTTTGATCCGACCAC-CGCAAAGT 753 ||||| | ||| ||||| ||| | |||| ||||||||||||||| ||||| | |||||| Sbjct 866 -TTTGAAGAATCACTCAACAAGGTTGTTGGGATGGGTTTTGATCCCACCACTC-CAAAGT 923 Query 754 TTGTCAAAGCTCTATACGTTGTTTAC-AATTTGAGTGACAAAACAATAGAAGAAAAAGTC 812 |||| ||||| ||| | |||||||| | ||||| ||||||| | |||||||||| || Sbjct 924 TTGTGGAAGCTTTATGCATTGTTTACGGA-TTGAGCGACAAAAGACTAGAAGAAAACTTC 982 Query 813 CATATTTACAAAAGGTTAGGCTTTGCTGTGGAA-GATGTATGGGTAA-TCTTCAAGAAGT 870 || | ||||| || || ||||| |||| || |||||||||| || | |||||||||| Sbjct 983 AATGTCTACAAGAGATTTGGCTTAACTGT-AAACGATGTATGGG-AACTTTTCAAGAAGT 1040 Query 871 GGCCTTTCTCT-TTGAAATTCTCAGAGGAA-AAGATAACTCAGACGA-TTGAAACCTTGA 927 | ||| || | ||| || ||| || ||| | ||||| |||||| | ||||| |||| | Sbjct 1041 GCCCTGCCTTTCTTG-GATACTCTGA-GAATAGGATAATTCAGAC-ATTTGAAGCCTTAA 1097 Query 928 AGATGTGTGGTTTGAACGAAAACGAGGTCCT-TCAAGTATTGAAGAAGTATCCGC-AGT- 984 ||| ||||||| || |||| | ||||| | || ||| || |||||| |||| | | | Sbjct 1098 AGAGGTGTGGTCTGTGCGAAGATGAGGTATTGTC-AGTGTTCAAGAAGAATCCACTA-TG 1155 Query 985 TTATACGT-ATGTCACAGCAGAAGATATTGAACTTCATTGAAACATTTTTAAGTC-TAGG 1042 | ||||| | ||| ||||| |||||||||||| ||| ||||||||| | || | |||| Sbjct 1156 CT-TACGTGCT-TCAGAGCAGCAGATATTGAACTCCATGGAAACATTTAT-AGGCTTAGG 1212 Query 1043 ATTCAGCAGAGATGAGTTT-ACGATGATAGTCAAATGCTTTCCT-ATGTGCTTTGGAT-T 1099 ||||||||||||||||||| | ||||| ||||| ||| ||||| | |||| |||||| | Sbjct 1213 ATTCAGCAGAGATGAGTTTGTC-ATGATGGTCAAGTGCCTTCCTCA-GTGCATTGGATAT 1270 Query 1100 GTCTGGAGAGACGGTGAAAAAGAAGACTGAGTTTGTGGTGAAGAAGACT-AATTGGTCAC 1158 |||| ||||| |||||| |||||||||||||||||||||||||||| | |||||| ||| Sbjct 1271 -TCTGCAGAGATGGTGAAGAAGAAGACTGAGTTTGTGGTGAAGAAGA-TGAATTGGCCAC 1328 Query 1159 TAAAGGACACTACTTCGTTCCCTCAGGTATTTGGATACAGCCTGGAGAAGAGGATTGTAC 1218 | |||| || ||||| ||||||||||||| ||||||| ||| |||||||||||| ||| | Sbjct 1329 TTAAGGTCATTACTTTGTTCCCTCAGGTACTTGGATATAGCATGGAGAAGAGGACTGTCC 1388 Query 1219 CAAGGTGTAACGTAATCAAAGCACTCATGTCCAGAGGATTGCTTGGAAGCGAACTCCCTT 1278 |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1389 CAAGGTGTAATGTAATCAAAGCTCTCATGTCCAAAGGATTGCTTGGAAGCGAACTCCCTC 1448 Query 1279 CAATGGCGTCTGTCTTGGCATGTAACGATCATG-CTTTTGTTAAAA-GGTATGTGAG--G 1334 ||||||||||||| |||||||||| |||||| | | || |||||| |||||||| | | Sbjct 1449 CAATGGCGTCTGTTTTGGCATGTACCGATCA-GACCTTC-TTAAAAAGGTATGTG-GTTG 1505 Query 1335 AAGCA-GAATGACAAGGAGCTTGTGGCT-GAGTTGATGGCTATTTTCA 1380 | ||| || ||| || |||| ||| || ||||||||| |||| |||| Sbjct 1506 A-GCATGA-TGA-AA--AGCTGGTG-CTTGAGTTGATGTCTATCTTCA 1547 > AT1G62110.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22957876-22959711 REVERSE LENGTH=1836 Length=1836 Score = 974 bits (527), Expect = 0.0 Identities = 1132/1410 (80%), Gaps = 98/1410 (7%) Strand=Plus/Plus Query 20 CATGTATTCTCTGATACTCCATGGAAGAA-GAT-CTACTGAGTTACATAAATGGCGTAAC 77 |||||||||| |||||||||||||||||| | | ||| |||| || ||||||||| | Sbjct 229 CATGTATTCTGTGATACTCCATGGAAGAAGGTTGGTAC--AGTTGCAGAAATGGCGTCA- 285 Query 78 TTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCC--TTC- 134 ||| | | || | | || ||||||||| | || |||||||| |||||| ||| Sbjct 286 TTT-GAGATT---T---G-TTGTGCAAAATGGA---TCAGCTTTTTCTAATTCCTATTCT 334 Query 135 TC--CT-CTGCTGCTGATGTGAGCCT-TAGAGATGGTCGAAAAGGT-AAGAACTTTACAA 189 || || |||| ||||| |||| || ||||||||||||||| || ||||||||||| Sbjct 335 TCTGCTAGTGCTACTGATTTGAG-CTCAAGAGATGGTCGAAAA-GTGAAGAACTTTACTG 392 Query 190 TCTCTTACCTTGTTGATTCATTGGGTTTACCTATAAAGCTCGCAGGATCGATTTCAAGGA 249 |||||||||| |||||||||||||||||| ||| ||| ||||| | ||| || |||| || Sbjct 393 TCTCTTACCTCGTTGATTCATTGGGTTTAGCTACAAAACTCGCTGAATCAATCTCAAAGA 452 Query 250 AAGTCAGGTTT-GAGAACAAGGCCAATCCCGATTCT-GTTCTGAGTCTTCTGAGAAGTCA 307 |||||| |||| | |||||||| |||||| |||| | |||||||||||| | |||||| | Sbjct 453 AAGTCA-GTTTCGTGAACAAGGGCAATCCTGATT-TAGTTCTGAGTCTTTTTAGAAGTTA 510 Query 308 TGGGTTCACAGATTCTCAGATCTCCACCATGATTACGAATTA-CCCACCATTGCTTATAT 366 |||||||||| ||||||||||||||| ||| |||||| |||| || | ||||||| || Sbjct 511 TGGGTTCACAAATTCTCAGATCTCCAGCATCATTACGGATTATCCTA-GATTGCTTCTAA 569 Query 367 TAGATGCTGAGAAATCACTTGCTCCCAAGTTTCAGTTTTTGCAGTCCAGAGGAGCTTCAA 426 ||||||||||||||||||||| | |||| ||||||||||| |||| ||||||||||||| Sbjct 570 TAGATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTCAA 629 Query 427 GCTCTGAGCTCACTCAGATTGTTTCTACAGTTCCGGAAATCTTGGGAAAGAGAG-GGGAC 485 || ||||||||||||||||||||||||||||||| |||| ||||||| || || |||| Sbjct 630 GCCCTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGGA- 688 Query 486 AAAACTCTCAG-CTTATGCTATGATTTTGTCAAAGAGAGTT-TAGTAGCGGATAAGAGTT 543 || |||| || | || ||||||||| |||||||||| || ||| ||| |||||||||| Sbjct 689 AAGTCTCT-AGGCAGATACTATGATTTCGTCAAAGAGA-TTATAGAAGCAGATAAGAGTT 746 Query 544 CCAAGTTGGAAAAGTTGTGTCATTCTTTGCCACAGGGTAAGCAGG-AGG--A-TAAAATC 599 |||||| |||| |||||||| |||||||| ||| ||| ||| ||| | ||||||| Sbjct 747 CCAAGTACGAAACTTTGTGTCAACCTTTGCCAGAGGCTAAT-AGGCAGGGTAATAAAATC 805 Query 600 AGAAATGTATCGGTT-TTGAGAGAATTGGGCATGCCTCACAAGTTGTTATTCTCCTTGCT 658 |||||||| |||||| || ||||| ||||| ||||||| |||||||||||||||||||| Sbjct 806 AGAAATGTTTCGGTTCTT-AGAGACTTGGGTGTGCCTCAGAAGTTGTTATTCTCCTTGCT 864 Query 659 TACATC-C-GTTGGTCAACCTGTATGTGGAAAAGATAGATTT-GATGCATCCCTCAAGAA 715 |||| | | || |||||||| ||||||||||| | |||| || | ||| |||||||| Sbjct 865 --CATCTCTGATGCCCAACCTGTTTGTGGAAAAGAAA-ATTTTGAAGAATCACTCAAGAA 921 Query 716 GATAGTTGAGATGGGTTTTGATCCGACCACCGCAAAGTTTGTCAAAGCTCTATACGT-TG 774 | | |||||||||||||||||||| |||||| ||||||||||| ||||||| || | || Sbjct 922 GGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGCTCT-TAGGGCTG 980 Query 775 TTTACA-ATTTGAGTGACAAAACAATAGAAGAAAAAGTCCATATTTACAAAAGGTTAGGC 833 |||||| ||| | ||||||||||||||||||| ||| || | || ||| |||| ||| Sbjct 981 TTTACAGATTC-ACCGACAAAACAATAGAAGAAAGAGTTAATGTGTATAAAGGGTTCGGC 1039 Query 834 TTTGCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTTCTCTTTGAA-ATTCTC 892 |||||||||||||||||||||| ||| |||||||| || |||| || |||||| | | || Sbjct 1040 TTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAATGTCCTTACTTTTTGAATAGT-TC 1098 Query 893 AGAGGAA-AAGATAACTCAGACGATTGAAACCTTGAAGATGTGTGGTTTGAA-CGAAAAC 950 ||| || ||||| |||||| ||||||||| |||||| |||||| | | |||| || Sbjct 1099 GGAG-AAGAAGATTGGTCAGACAATTGAAACCCTGAAGAAGTGTGGACT-ACTCGAAGAC 1156 Query 951 GAGGTCCT-TCAAGTATTGAAGAAGTATCCGCAGTTTATACGTA-TGTCACAGCAGAAGA 1008 |||||| | ||| || ||||| ||||||||||||| || ||| | ||| ||||||||| Sbjct 1157 GAGGTCATCTCA-GTGTTGAAAAAGTATCCGCAGTGCATTGGTACT-TCAGAGCAGAAGA 1214 Query 1009 TATTGAACTTCATTGAAACATTTTTAAGTCTAGGATTCAGCAGAGATGAGTTTACGATGA 1068 ||||||||| |||||||| |||| || | ||||| ||||||||||||||||| | | | Sbjct 1215 TATTGAACTCCATTGAAATATTTCTAGGCCTAGGCTTCAGCAGAGATGAGTTCATAACAA 1274 Query 1069 TAGTCAAATGCTTTCCT-A-TGTGCTT-TGGATTGTCTGGAGAGACGGTGAAAAAGAAGA 1125 | || || |||||||| | ||| ||| | || |||| |||||||||||| ||||||| Sbjct 1275 TGGTTAAGCGCTTTCCTCAGTGT-CTTATT--TTATCTGCAGAGACGGTGAAGAAGAAGA 1331 Query 1126 CTGAGTTTGTGGTGAAGAAGACT-AATTGGTCACTAAAGGACACTACTT-CGT-TCCCT- 1181 |||||||||||||||||||| | |||||| |||| ||||| | || | ||| | Sbjct 1332 TTGAGTTTGTGGTGAAGAAGA-TGAATTGGCCACTGAAGGATG-TGGTTTCAAATCC-TA 1388 Query 1182 CAGGTATTTGGATACAGCCTGGAGAAGAGGATTGTACCAAGGTGTAACGTAATCAAAGCA 1241 | |||| ||||||||| |||||||||||||| ||| ||||||||||| || || |||| Sbjct 1389 C-GGTACTTGGATACAACCTGGAGAAGAGGACTGTCCCAAGGTGTAATGTTATTGAAGCT 1447 Query 1242 CTCATGTCCAGAGGA-TT---G----CTT-GGAAGCGAACTCCCTTCAATGGCGTCTGTC 1292 |||||||| | | || || | | ||||| ||||||||| ||||| ||||||| Sbjct 1448 CTCATGTCAAAAAGACTTCTCGGAGACACAGGAAGTGAACTCCCTCCAATGTCGTCTGTT 1507 Query 1293 TTGGCATGTAAC-GATCATGCTT-TTGTTAAAA-GGTATGTGAGGAAGCA-GAATGACAA 1348 |||| ||||| | ||| | | || || |||||| ||||||||||||| || | |||||| Sbjct 1508 TTGGTATGTA-CTGATGA-G-TTGTTCTTAAAAAGGTATGTGAGGAACCATGG-TGACAA 1563 Query 1349 GGAGCTTGTGGCT-GAGTTGATGGCTATTT 1377 |||||| ||| || ||||||||| |||||| Sbjct 1564 GGAGCTGGTG-CTTGAGTTGATGACTATTT 1592 > AT1G61960.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22902150-22903837 FORWARD LENGTH=1688 Length=1688 Score = 917 bits (496), Expect = 0.0 Identities = 1124/1413 (80%), Gaps = 100/1413 (7%) Strand=Plus/Plus Query 20 CATGTATTCTCTGATACTCCATGGAAGAAGATCTACT-GAGTTACATAAA-TGGCGTAAC 77 ||||||| ||||||||| |||||||||||| | | | ||||||| ||| || | ||| Sbjct 89 CATGTATGCTCTGATACACCATGGAAGAAGGT-TGGTCCAGTTACAGAAATTGTC-TAA- 145 Query 78 TTT-AGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTC 136 ||| || ||||| || || ||||| | | |||||||| |||||||||||||| Sbjct 146 TTTCAGAGTTTC-----AG---TT-CAAAACGGA---TCTGCTTTGTCCAATTCCTTCTC 193 Query 137 -----CT-CTGCTGCTGATGTGAGCCTTAGAGATGGTCGAAAAGGTAAGAACTTTACAAT 190 || || |||||||| || ||||| |||| | | |||||||| ||||||||| | Sbjct 194 TTTTGCTAGTGTTGCTGATGCGACCCTTATAGATAGCCTTAAAGGTAACAACTTTACAGT 253 Query 191 CTCTTACCTTGTTGATTCATTGGGTTT-ACCTATAAAGCTCGCAGGATCGAT-TTCAAGG 248 ||||||||| ||||||||||||||||| ||| | ||||||||||| |||||| | ||| | Sbjct 254 CTCTTACCTAGTTGATTCATTGGGTTTAACC-ACAAAGCTCGCAGAATCGATCTCCAA-G 311 Query 249 AAAGTCAGGTTTGAGAACAAGG-CCAATCCCGATTCTGTTCTGAGTCTTCTGAGAAGTCA 307 ||||| || || ||| | ||| ||||| |||||||||||||||||||| | |||| | Sbjct 312 AAAGTAAGCTTCGAGGA-GAGGAGAAATCCGGATTCTGTTCTGAGTCTTCTTACAAGTTA 370 Query 308 TGGGTTCACAGATTCTCAGATCTCCACCATGATTACGAAT-TACCCACCATTGCTTATAT 366 |||||||||| | |||||||| || | || ||||| || ||||||| ||||||| || Sbjct 371 TGGGTTCACAAAGTCTCAGATTTCAAGTATCATTAC-TATCTACCCACGATTGCTTGCAT 429 Query 367 TAGATGCTGAGAAAT-CACTTGCTCCCAAGTTTCAGTTTTTGCAGTCCAGAGGAGCTTCA 425 ||||||||||||||| || ||||||||||| |||||| | |||||||||||||||||||| Sbjct 430 TAGATGCTGAGAAATCCA-TTGCTCCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTTCA 488 Query 426 AGCTCTGAGCTCACTCAGATTGTTTCTACAGTTCCGGAAATCTTGGGAAAGAGAGGGGAC 485 ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| || Sbjct 489 AGCTCTGAGCTCACTCAGATTGTTTCTACTGTTCCTAAAATCTTGGGGAAGAGAGGGCAC 548 Query 486 AAAACTCTCAGCT-TATGCTATGATTTTGTCAAAGAGAGTT-TAGTAGCGGATAAGAGTT 543 ||| || | | || ||| ||||||||| |||||||| | || ||| ||| |||||||||| Sbjct 549 AAATCTATAA-CTGTATACTATGATTTCGTCAAAGACA-TTATAGAAGCTGATAAGAGTT 606 Query 544 CCAAGTTG-GAAAAGTTGTGTCATTCTTTGCCACAGGGTAAGCAGGAGGA-TAAAATCAG 601 | | ||| |||||||| ||||||||||| ||||||||||| || || || ||| ||||| Sbjct 607 CTA-GTTACGAAAAGTTATGTCATTCTTTTCCACAGGGTAA-CAAGAAGAATAAGATCAG 664 Query 602 AAATGTATCGGTTTTGAGAGAATTGGGCATGCCTCA-CAAGTT-GTTATTCTCCTT-GCT 658 |||| | || ||||||||||||||||| || |||| | ||| ||||||| |||| ||| Sbjct 665 AAATATCTCTGTTTTGAGAGAATTGGGTGTGGCTCAGC--GTTTGTTATTC-CCTTTGCT 721 Query 659 TACATC-C-GTTGGTCAACCTGTATGTGGAAAAGATAGATTTGATGCATCCCTCAAGAAG 716 |||| | | ||| |||||||| ||||| ||||| |||||||| | ||| ||||||||| Sbjct 722 --CATCTCAGATGGCCAACCTGTCTGTGGTAAAGAAAGATTTGAAGAATCTCTCAAGAAG 779 Query 717 ATAGTTGAGATGGGTTTTGATCCG-ACCACCGCAAAGTTTGTCAAAGCTCTAT-ACGTTG 774 | ||||||||||||||||||||| | || ||||||| || ||||||| | ||| Sbjct 780 GTTGTTGAGATGGGTTTTGATCCGGAG-ACTACAAAGTTCGTTGAAGCTCTGCGA-GTTA 837 Query 775 TTTACAATTTGAGTGACAAAACAATAGAAGAAAAAGTCCATATTTACAAAAGGTTAGGCT 834 ||||| | ||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct 838 TTTACCGTATGAGTGACAAAACAATAGAAGAAAAAGTCAATGTCTACAAAAGGTTAGGCT 897 Query 835 TTGCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTTCTCTTT-GAAATTCTCA 893 ||| ||||| |||||||||| |||||||||||||||||||| || ||| | || |||| Sbjct 898 TTGGTGTGGCTGATGTATGGGCAATCTTCAAGAAGTGGCCTT-CTTTTTTGTCATACTCA 956 Query 894 GAGGAA-AAGATAACTCAGACGATTGAAACC-TTGAAGATGT-GTGGTTTGAACGAAA-A 949 ||| || ||||||||||| || |||||||| || |||| || ||||| || ||| | Sbjct 957 GAG-AAGAAGATAACTCATACTTTTGAAACCCTT-AAGA-GTTGTGGTCTGCTT-AAACA 1012 Query 950 CGAGGTCCT-TCAAGTATTGAAGAAGTATCCGCAGTTTATACGTATGT-CACAGCAGAAG 1007 ||||||||| | | | ||||||||| |||| | | || || | | || |||||||| Sbjct 1013 CGAGGTCCTGTTAT-TGTTGAAGAAGCATCCAAAATGCATTTGT-TCTTCAGAGCAGAAG 1070 Query 1008 ATAT-TGAACTTCATTGAAACATTTTTAAGTCTAGGATTCAGCAGAGATGAGTTTACGAT 1066 || | |||||| ||| |||||||| ||| | |||||||||||||||||||||||| |||| Sbjct 1071 AT-TGTGAACTCCATAGAAACATTCTTAGGCCTAGGATTCAGCAGAGATGAGTTTGCGAT 1129 Query 1067 GATAGTCAAATGCTTTCCT-ATGTGCTTTGGATTGT-CTGGAGAGACGGTGAAAAAGAAG 1124 ||| ||||| | | |||| | |||| ||| | | | ||| ||||| ||||| ||||| Sbjct 1130 GATGGTCAAGCGATATCCTCA-GTGCATTG-ACTATACTGCTGAGACAGTGAAGAAGAAA 1187 Query 1125 ACTGAGTTTGTGGTGAAGAAGACT-AATTGGTCACTAAAGGACACTACTT-CGTTCCCTC 1182 ||||||||| | |||||||| | | |||||| ||||| ||| | | || || |||||| Sbjct 1188 ACTGAGTTTATTGTGAAGAATA-TGAATTGGCCACTAGAGG-CTTTGGTTTCGATCCCTC 1245 Query 1183 AGGTATTTGGATACAGCCTGGAGAAGAGGATTGTACCAAGGTGTAACGTAATCAAAGCAC 1242 |||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||| | | Sbjct 1246 AGGTATTTGGATACAGCCTGGAGAAGAGAACTGTCCCAAGGTGTAATGTAATCAAAACTC 1305 Query 1243 TCATGTCCAGAGGATTGCTTGGAAG-CG-AACT----CCCTTC-AATGGCGTCTGTCTTG 1295 |||| || | |||| || | | ||| || || | ||| || |||| | ||||| || Sbjct 1306 TCATCTCAAAAGGACTGAT-GAAAGACGGAAGTGAAGCCCCTCCAATGTCATCTGTTTTA 1364 Query 1296 GCATGTAACGATCATGCTTTTGTTAAA-AGGTATGTGAGGAAGCAGAATGACAAGGAGCT 1354 || ||| |||||| || ||| |||| |||||||||| |||||| |||||| | Sbjct 1365 ACAAGTACCGATCAGGCGTTT-TTAAGGAGGTATGTGATGAAGCAC---GACAAG----T 1416 Query 1355 TGTGG-C-TGAGTTGATGGCTATTTTCATTGGA 1385 || | | ||||||||||||||| |||| |||| Sbjct 1417 TG-GCACCTGAGTTGATGGCTATCTTCACTGGA 1448 > AT1G61970.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22904486-22907630 FORWARD LENGTH=2848 Length=2848 Score = 773 bits (418), Expect = 0.0 Identities = 727/871 (83%), Gaps = 41/871 (5%) Strand=Plus/Plus Query 20 CATGTATTCTCTGATACTCCATGGAAGAA-GAT-CTACTGAGTTACATAAATGGCGTAAC 77 ||||||| ||||||||||||||||||||| | | ||| |||| || |||||| ||||| Sbjct 227 CATGTATGCTCTGATACTCCATGGAAGAAGGTTGGTAC--AGTTGCAGAAATGGTGTAAC 284 Query 78 TTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTCC 137 |||||| |||| || ||||||| | | || | || ||||||| ||||||| Sbjct 285 TTTAGTCTTTC-----AG----TGCAAAAGGCA-TCAC--CTACATCCAATTTCTTCTCC 332 Query 138 TCTG---CTGCTG-ATG--TGAG-CCTTAGAGATGGTCGAAAAGGTAAGAACTTTACAAT 190 |||| |||||| || |||| || ||||| |||||||||||| || ||||||||| | Sbjct 333 TCTGCTTCTGCTGCGTGTTTGAGTCC-TAGAGTTGGTCGAAAAGGAAACAACTTTACAGT 391 Query 191 CTCTTACCTTGTTGATTCATTGGG-TTTACCTATAAAGCTCGCAGGATCGATTTCAAGGA 249 |||||||||||||||||||||||| || ||| | ||| ||||| | ||| |||||| ||| Sbjct 392 CTCTTACCTTGTTGATTCATTGGGCTTAACC-ACAAAACTCGCTGAATCCATTTCACGGA 450 Query 250 AAGTCAGGTTTGAGAACAAGGCCAATCCCGATTCTGTTCTGAGTCTTCTGAGAAGTCATG 309 | || || || ||| ||||| |||||| ||||||||||||| |||| ||| |||||||| Sbjct 451 AGGTTAGCTTCGAGGACAAGAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCATG 510 Query 310 GGTTCACAGATTCTCAGATCTCCACCATGATTACGAATTACCCACCA-TTGCTTATATTA 368 ||||||||| |||||||||||||||||| |||| | |||||||| || ||||||||| | Sbjct 511 GGTTCACAGGTTCTCAGATCTCCACCATCATTAGGGATTACCCA-CAGTTGCTTATAGCA 569 Query 369 GATGCTGAGAAATCACTTGCTCCCAAGTTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGC 428 ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| Sbjct 570 GATGCTGAGAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGC 629 Query 429 TCTGAGCTCACTCAGATTGTTTCTACAGTTCCGGAAATCTTGGGAAAGAGAGGGGACAAA 488 ||||| ||||| ||||||||||| ||||||||||||| |||||||||| |||| ||||| Sbjct 630 TCTGAAATCACTGAGATTGTTTCTTCAGTTCCGGAAATATTGGGAAAGAAAGGGCACAAA 689 Query 489 ACTCTCAGCTTATGCTATGATTTTGTCAAAGAGAGTTTAGTAGC-GGATAAGAGTTCCAA 547 ||| ||||| ||| ||||||||| ||||||| | || | || || ||||||||||| Sbjct 690 ACTATCAGCGTATACTATGATTTCATCAAAGACA-CTT--T-GCTTGAGAAGAGTTCCAA 745 Query 548 GTTGGAAAAGTTGTGTCATTCTTTGCCACAGGGTAAGCAGGAGGATAAAATCAGAAATGT 607 | |||||||| ||||||||||||||||||||||| | |||| | || ||||||||||| Sbjct 746 GAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAATCTGGAGAACAAGATCAGAAATGT 805 Query 608 ATCGGTTTTGAGAGAATTGGGCATGCCTCACAAGTTGTTATTCTCCTTGCTTA-CATCCG 666 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| | | |||| Sbjct 806 ATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTATTCTCCTTGCTCATC-TCCG 864 Query 667 TTGGTCAACCTGTATGTGGAAAAGATAGATTTGATGCATCCCTCAAGAA-GATAGTTGAG 725 | | |||||||||||||||||||| | |||||| | | |||||||||| | | |||||| Sbjct 865 ATAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGTT-GTTGAG 923 Query 726 ATGGGTTTTGATCCGACCACCGCAAAGTTTGTCAAAGCTCTATACGTTGTTTACAATTTG 785 |||||||||||||| |||||| ||||||||||| |||||||| | ||| ||||||| || Sbjct 924 ATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGCTCTACAAGTTATTTACAAAATG 983 Query 786 AGTGACAAAACAATAGAAGAAAAAGTCCATATTTACAAAAGGTTAGGCTTTGCTGTGGAA 845 | || |||||||| ||||||||||||||| | || ||||| |||||||||| ||||| | Sbjct 984 AACGAGAAAACAATCGAAGAAAAAGTCCATCTCTATAAAAGCTTAGGCTTTGATGTGGGA 1043 Query 846 GATGTATGGGT-AA-TCTTCAAGAAGTGGCC 874 ||||||||| | || | || || |||||||| Sbjct 1044 GATGTATGG-TCAAGTTTTAAA-AAGTGGCC 1072 > AT1G62490.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:23130405-23131533 REVERSE LENGTH=1005 Length=1005 Score = 638 bits (345), Expect = 0.0 Identities = 497/568 (88%), Gaps = 19/568 (3%) Strand=Plus/Plus Query 463 AAA-TCTTGGGAAAGAGAGGGGACAAAACTCTCAGCTTATGCTATGATTTTGTCAAAGAG 521 ||| |||||||||| |||||| |||||||||||||||||| ||||||||| || |||||| Sbjct 451 AAACTCTTGGGAAAAAGAGGGCACAAAACTCTCAGCTTATACTATGATTTCGTTAAAGAG 510 Query 522 AGTTTAGTAGCGGATAAGAGTTCCAAGT-TGGAAAAGTTGTGTCATTCTTTGCCACAGGG 580 ||||||| ||| ||||||||||| |||| | |||| || ||||| ||||| |||||||| Sbjct 511 AGTTTAGAAGCAGATAAGAGTTCTAAGTAT-GAAACTTTATGTCAGTCTTTTCCACAGGG 569 Query 581 TAAGCAGGAGGATAA-AATCAGAAATGTATCGGTTTTGAGAGAATTGGGCATGCCTCACA 639 ||| | |||| | || || ||||||||||||||||| ||||||||||| |||||||||| Sbjct 570 TAATCTGGAGAACAAGAA-GAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACA 628 Query 640 AGTTGTTATTCTCCTTGCTTACATCCGTTGGTCAACCTGTATGTGGAAAAGATAGATTTG 699 ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 629 AGTTGTTATTCCCCTTGCTTATATCCGTTGGTCAACCTGTATGTGGAAAAGATAGATTTA 688 Query 700 ATGCATCCCTCAAGAAGATAGTTGAGATGGGTTTTGATCCGACCACCGCAAAGTTTGTCA 759 || | || ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 689 ATACGTCTCTCAAGAAGGTAGTTGAGATGGGTTTTGATCCGACCACCGCAAAGTTTGTCA 748 Query 760 AAGCTCTATACGT-TGTTTAC-AATTTGAGTGACAAAACAATAGAAGAAAAAGTCCATAT 817 ||||||| |||| | || || || | || |||||||||||||||||||||||| || | Sbjct 749 AAGCTCTCCACGTATCTT-ACGAAAT-GAACGACAAAACAATAGAAGAAAAAGTCAATGT 806 Query 818 TTACAAAAGGTTAGGCTTTGCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTT 877 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 807 CTACAAAATGTTAGGCTTTGCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCATA 866 Query 878 CTCTTTGAAATTCTCAGAGGAAAAGATAACTCAGACGATTGAAACCTTGAAGATGTGTGG 937 ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 867 CTCTTTGAAATACTCAGAGGAAAAGATTACTCAGACGATTGAAACCTTGAAGATGTGCGG 926 Query 938 TTTGAACGAAAACGAGGTCCTTCAAGTATTGAAGAAGTATCCGCAGTTTATACGTA-TGT 996 | | | ||| | | |||||||||| |||||||||||||| || || ||||||| | | Sbjct 927 TCT-A-CGA----G-G-TCCTTCAAGTTTTGAAGAAGTATCCTCAATTCATACGTACT-T 977 Query 997 CACAGCAGAAGATATTGAACTTCATTGA 1024 | |||||| |||||||| ||| ||||| Sbjct 978 GAGAGCAGAGGATATTGAGCTTAATTGA 1005 Score = 429 bits (232), Expect = 4e-119 Identities = 309/344 (90%), Gaps = 14/344 (4%) Strand=Plus/Plus Query 1 GAGATTTGACTGGTTCTGACATGTATTCTCTGATACTCCATGGAAGAAGATCTACT-GAG 59 ||||||||||||||| || |||| ||||||||||||||||||||||||||||| | ||| Sbjct 101 GAGATTTGACTGGTTATGTGATGTGTTCTCTGATACTCCATGGAAGAAGATCTA-TCGAG 159 Query 60 TTACATAAATGGCGTAACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160 TTACATAAATGGCGTAACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCT 219 Query 120 TTTTCCAATTCCTTCTCC--T----CT-G--CTGCTG---ATGTGAGCCTTAGAGATGGT 167 |||||||||||||||||| | || | |||||| |||||||||||| |||| || Sbjct 220 TTTTCCAATTCCTTCTCCACTGTTGCTAGTGCTGCTGCTGATGTGAGCCTTATAGATAGT 279 Query 168 CGAAAAGGTAAGAACTTTACAATCTCTTACCTTGTTGATTCATTGGGTTTACCTATAAAG 227 | ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| Sbjct 280 CAAAAAGGTAAGAACTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCTAAAAAG 339 Query 228 CTCGCAGGATCGATTTCAAGGAAAGTCAGGTTTGAGAACAAGGCCAATCCCGATTCTGTT 287 ||||| | ||||||||||| |||| | || || ||| ||||||||||||| ||||||||| Sbjct 340 CTCGCTGAATCGATTTCAAAGAAATTTAGATTCGAGGACAAGGCCAATCCTGATTCTGTT 399 Query 288 CTGAGTCTTCTGAGAAGTCATGGGTTCACAGATTCTCAGATCTC 331 ||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 400 CTGAGTCTTTTGAGAAGTCATGGGTTCACAGTTTCTCAGATCTC 443 > AT1G62010.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22915745-22917330 FORWARD LENGTH=1586 Length=1586 Score = 396 bits (214), Expect = 4e-109 Identities = 503/637 (79%), Gaps = 41/637 (6%) Strand=Plus/Plus Query 265 ACAAGGCCAATCCCGATTCTGTTCT-GAGTCTTCTGAGAAGTCATGGGTTCACAGATTCT 323 |||||| ||| | ||||| ||||| || |||||| |||||| |||||||||| |||||| Sbjct 338 ACAAGGGAAATTCTGATTCCGTTCTGGA-TCTTCTCAGAAGTTATGGGTTCACTGATTCT 396 Query 324 CAGATCTCCACCATGATTACGAATTACCCACCATTGCTTATATTA-GATGCTGAGAAATC 382 |||||||||| ||| || | || | | || | |||||||| | ||| || || ||| Sbjct 397 CAGATCTCCAGCATCATCAGGAGTGATTCAAGAGTGCTTATA-GACAATGATGCGACATC 455 Query 383 ACTTGCTCCCAAGTTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTCA 442 |||| | | ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 456 CCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTGA 515 Query 443 GATTGTTTCTACAGTTCCGGAAATCTTGGGAAAGAGAG-GGGACAAAACTCTCAGCTTAT 501 | ||||||| |||||||| |||||||||| ||||||| ||| |||| |||||||| || Sbjct 516 GGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAGGG-CAAATCTCTCAGCAGAT 574 Query 502 GCTATGATTTTGTCAAAGAGAGTT-TAGTAGCGGATAAGAGTTCCAAGT-TGGAAAAGTT 559 |||||||| |||||| | || ||| ||| |||||||||||||||| || ||||| | Sbjct 575 ATTATGATTTCATCAAAGTCA-TTATAGAAGCTGATAAGAGTTCCAAGTATG-AAAAGAT 632 Query 560 GTGTCATTCTTTGCCACAGGGTAAGCAGGAGGATAAAATCAGAAATGTATCGGTTTTGAG 619 | |||||||||| |||||||||| || || || ||||||| | | ||||||||| Sbjct 633 ATCTCATTCTTTGGCACAGGGTAA-CA--AG-AT-----CAGAAATATCTTGGTTTTGAG 683 Query 620 AGAATTGGGCATGCCTCACAAGTTGTTATT-CTCCTTGCTTA-CATCCGT-TGGTCAACC 676 |||| | ||| ||||||| ||| |||| | || ||||| | | ||| | | || || Sbjct 684 AGAACTAGGCGTGCCTCAAAAGCGGTTACTGCTT-TTGCTCATC-TCCAAATCG-CAGCC 740 Query 677 TGTATGTGGAAAAGATA-GATTTGATGCATCCCTCAAGAAGATAGTTGAGATGGGTTTTG 735 ||| ||||||||||| | | ||||||||||| ||||||||| |||||||||||||||||| Sbjct 741 TGTTTGTGGAAAAGAAAAG-TTTGATGCATCACTCAAGAAGGTAGTTGAGATGGGTTTTG 799 Query 736 ATCCGACCACCGCAAAGTTTGT-CAAAGCTCTATACGT-TG-TTTAC-AATTTGAGTGAC 791 |||| |||||| ||| |||||| || ||| | | | | || ||||| || | ||| ||| Sbjct 800 ATCCAACCACCTCAACGTTTGTGCAC-GCT-T-TGCATATGCTTTACCAAAT-GAGCGAC 855 Query 792 AAAACAATAGAAGAAAAAGTCCATATT-TACAAAAG-GTTAGGCTT-TGCTGTGGAAGAT 848 ||||| || ||||||||| ||| | | || | ||| || ||| || | |||| || ||| Sbjct 856 AAAACGATTGAAGAAAAAATCCG-AGTCTATAGAAGTGT-AGGTTTCT-CTGTTGATGAT 912 Query 849 GTATGGGTAATCTTCAAGAAGTGGCCTTTCTCTTTGA 885 ||||||| ||| |||||||||||||| |||||||| Sbjct 913 GTATGGGCAATGTTCAAGAAGTGGCCACGCTCTTTGA 949 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72087982620 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5