BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924765
Length=2542
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62340.1 | Symbols: ALE1, ALE | PA-domain containing subtila... 3563 0.0
> AT1G62340.1 | Symbols: ALE1, ALE | PA-domain containing subtilase
family protein | chr1:23051002-23055672 REVERSE LENGTH=2636
Length=2636
Score = 3563 bits (1929), Expect = 0.0
Identities = 2337/2539 (92%), Gaps = 8/2539 (0%)
Strand=Plus/Plus
Query 8 TCCTAATAAGGATTTAATGGAAACTAATCCAAGAAAAATACGGTCATATTGTTACATATG 67
||||||||| ||| |||||||||| |||||||||||| || | ||||||| ||||||||
Sbjct 1 TCCTAATAAAGATCTAATGGAAACCAATCCAAGAAAACTAAGATCATATTCCTACATATG 60
Query 68 GTTGATAGTATGCATATTTGTATTGATTGTTTGTTCAATATTGTCCAGAGCAgaagaaaa 127
|| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 61 TTTAATAGTATGTATATTTGTATTGGTTGTTTGTGCAATATTGTCCAGAGCAGAAGAAAA 120
Query 128 agaaggaaaaaacgaaaaCGATGATCATATACCAAAGATTTACTCTGTTTTGGTTGAAGG 187
|||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 121 AGAAGGAAAAGGCGAAAACGATGATCATATACCAAAGATTTACTCTATTTTGGTTGAAGG 180
Query 188 TGAACCATTGGCCTTTCGTGCTTCTACTAACATCAACAGCAAAGCTATGGC-ATATGAAG 246
|||||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||
Sbjct 181 TGAACCATTGGCCTTTCGAGCTTCTACTAATATCAACAGCAAAGCTATGGCGTTA-GAAG 239
Query 247 CAAAGAAGATAGTAGAGATTCATGACGAAATACTTGGAAGCACACTTGAAAATGGAAGTT 306
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 240 CAAAGAAGATAGAAGAGATTCATGACGAAATACTTGGAAGCACACTTGAAAAGGGAAGTT 299
Query 307 ATACAAAGCTTTATAGCTTCAAACATGTCATCAATGCTTTTGCAGTCCGTACCACTGCTT 366
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 300 ATACAAAGCTTTATAGCTTCAAACATGTCATCAATGCTATTGCAGTCCGTACCACTGCTT 359
Query 367 CTCAGGCCAAGAAACTAAAGAAAACAAAAGGAGTGAAGGCAGTAGAAGAAGACAAAGGAG 426
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CTCAGGCCAAGAAACTCGGGAAAACAAAAGGAGTGAAGGCAGTAGAAGAAGACAAAGGAG 419
Query 427 TGAAACTAATGACAACTTACACTCCCGATTTCTTGGAACTTCCTAAACAAGTCTGGCCTA 486
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |
Sbjct 420 TGAAACTAATGACAACATACACTCCCGATTTCTTGGAACTTCCTCAACAAGTCTGGCAAA 479
Query 487 AGATCTCCAGTGAAGGTGGCAGACGCGCAGGAGAAGATATCGTAATCGGTTTTGTGGACA 546
||||||| | ||||| | |||||| || |||||||| ||||| |||||||| |||||||
Sbjct 480 AGATCTCAAACGAAGGAGACAGACGTGCTGGAGAAGACATCGTGATCGGTTTCGTGGACA 539
Query 547 CTGGAATTAACCCTACTCATCCGAGCTTCGCCGCACTCGATCTCACAAACCCTTACTCAT 606
| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 540 CCGGAATTAACCCTACTCATCCTAGCTTCGCCGCACTTGATCTCACAAACCCTTACTCAT 599
Query 607 CAAATCTCTCACGTTTGAAATTCTCCGGCGACTGTGAGACCGGT-CCTCTCTTCC-CCGC 664
||||||||||||||||| | |||||||| |||||||||| |||| ||| | |||| || |
Sbjct 600 CAAATCTCTCACGTTTGCATTTCTCCGGTGACTGTGAGATCGGTCCCTTTTTTCCACC-C 658
Query 665 TGGATCTTGTAACGGAAAAATCATATCCGCTAGGTTCTTTTCCGCCGGAGCTCGAGCTTC 724
|||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 659 -GGATCTTGTAACGGAAAAATTATCTCCGCAAGGTTCTTTTCCGCCGGAGCTCGAGCTTC 717
Query 725 CGTG-GCTCTCAACTCCTCATTGGATATACTCTCTCCGTTCGATGCCTCCGGCCACGGAA 783
| | ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 718 AG-GCGCTCTTAACTCCTCCTTGGATATACTCTCTCCGTTCGATGCGTCCGGCCACGGAA 776
Query 784 GCCACGTGGCATCTATCGCAGCCGGCAACGCTGGTGTTCCAGTGATCGTCGACGGATTCT 843
||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct 777 GCCACGTGGCATCCATCGCAGCCGGGAACGCTGGAGTTCCGGTGATCGTCGACGGATTCT 836
Query 844 TCTACGGACAAGCCAGCGGTATGGCCCCACGTGCACGAATAGCCGTTTACAAGGCGATTT 903
||||||| | || |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 837 TCTACGGCCGTGCTAGCGGTATGGCCCCACGTTCACGAATAGCCGTCTACAAGGCGATTT 896
Query 904 ATCCATCAATCGGAACTCTTGTTGACGTAATTGCAGCCATCGACCAAGCAATTATGGACG 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 ATCCATCAATCGGAACTCTTGTTGACGTAATTGCAGCCATCGACCAAGCAATTATGGACG 956
Query 964 GCGTAGATGTATTGACACTATCGGTGGGACCGGACGAACCACCGGTGGATAAACCGACGG 1023
|||||||||| ||||| |||||||| ||||| |||||||||||||||||||| || ||||
Sbjct 957 GCGTAGATGTGTTGACGCTATCGGTTGGACCAGACGAACCACCGGTGGATAAGCCCACGG 1016
Query 1024 TACTCGGGATATTCGATCTATCAATGCTATTGGCTAGAAAGGCTGGGGTATTTGTGGTGC 1083
|||||||||||||||| || ||||||||||||||||||| || || || ||||||||||
Sbjct 1017 TACTCGGGATATTCGACCTCGCAATGCTATTGGCTAGAAAAGCCGGCGTGTTTGTGGTGC 1076
Query 1084 AAGCCGTAGGGAATAATGGCCCGTCACCGTCTTCTGTCTTGTCTTATAGTCCGTGGGTCG 1143
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1077 AAGCCGTAGGGAATAATGGCCCGTCGCCGTCTTCTGTGTTGTCTTATAGTCCGTGGGTCG 1136
Query 1144 TCGGGGTTGCCGCAGGAAGTACGGACCGGTCTTATCCTGCCTCCCTTATTCTTGACGGTG 1203
|||| ||||| || |||| ||| |||||||||||||||||| |||| || || |||||||
Sbjct 1137 TCGGTGTTGCTGCCGGAAATACTGACCGGTCTTATCCTGCCCCCCTCATCCTCGACGGTG 1196
Query 1204 GCCAGACCGTTTATGGCGTCGGCCTATCAGGTCCAACCCTTGGAGCTCCATTACTTCAAC 1263
|||| |||||| | ||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 1197 GCCAAACCGTTCAGGGCGTTGGACTATCAGGTCCAACCCTTGGAGCTCCATTAGTTCAAC 1256
Query 1264 ACAGGCTAGTCTTAGCCAGAGACGCTGTTAGAACAAACGGCTCGGTTCTACAACCCCTAA 1323
|||| || |||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1257 ACAGACTTGTCTTAGCCAAAGACGCTGTTAGAACAAACGGCTCGGTTCTACAACCCTTAA 1316
Query 1324 GAAGTGACATTGAAGAATGCCAGCGTCCAGAGAATTTTGACCCAGCCGCGGTTTTTGGAA 1383
|| |||||||||||||||||||| || |||||||||||||| ||||| ||||||||||
Sbjct 1317 CCAGAGACATTGAAGAATGCCAGCGGCCGGAGAATTTTGACCCTGCCGCAGTTTTTGGAA 1376
Query 1384 CTATTGTGATATGTACATTTTCTGATGGCTTCTACAATCAGATGTCGACCGTTCGAGCCA 1443
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1377 GTATCGTGATATGTACATTTTCTGATGGCTTCTACAATCAGATGTCGACCGTTCTTGCCA 1436
Query 1444 TCACCCAAACCGCTAGGAATCTTGGTTTCATGGGTTTTATACTCATTGCAAATCCTAGAT 1503
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 TCACCCAAACCGCCAGGACTCTTGGTTTCATGGGTTTTATACTCATTGCAAATCCTAGAT 1496
Query 1504 TCGGTGATTATGTTGCAGAACCAGTGTTATTTTCGGCTCCTGGTATTCTAATCCCTACAG 1563
|||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 1497 TCGGCGATTATGTTGCAGAACCAGTGATATTTTCAGCTCCTGGTATTCTAATCCCTACAG 1556
Query 1564 TATCAGCTGCCCAGATTATTTTGAGGTACTACGAAGAGAAAACCTACAGAGACAAGAGAG 1623
||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||
Sbjct 1557 TATCAGCTGCCCAGATTATTTTGAGATACTACGAAGAGAAAACCTTTAGAGACACGAGAG 1616
Query 1624 GAATAGTGACACAATTTGGGGCACGTGGAAGAATTGATGAAGGACGGAACTCGGTCTTCG 1683
|| | | |||||||||||||||||||| ||||| | ||||| || |||||||||||||
Sbjct 1617 GAGTGGCGACACAATTTGGGGCACGTGCTAGAATAGGCGAAGGCCGAAACTCGGTCTTCG 1676
Query 1684 CCGGAAAAGCACCGGTCGTGAGCAGATTCTCTTCGAGAGGACCAGCTTTTATTGATGCAA 1743
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1677 CCGGAAAAGCACCGGTGGTGAGCAGATTTTCTTCGAGAGGGCCAGCTTTTATTGATGCAA 1736
Query 1744 ATCGGAATCTTTTAGATGTGCTTAAGCCAGATATTCTTGCACCTGGTCACCAAATATGGG 1803
||||| || ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1737 CTCGGAGTCCTTTAGATGTACTTAAGCCAGATATTCTTGCACCTGGTCACCAAATTTGGG 1796
Query 1804 GAGCCTGGAGCCTCCCTAGTGCCTTTGATCCTATTCTCACTGGACGGAGCTTTGCAATAT 1863
| || |||||||||||||||||||||||||||||| | || ||||| |||||||| ||||
Sbjct 1797 GTGCTTGGAGCCTCCCTAGTGCCTTTGATCCTATTTTGACAGGACGAAGCTTTGCCATAT 1856
Query 1864 TGTCGGGAACAAGCATGGCCACTCCTCATATAGCGGGGATTGGTGCACTCATAAAACAGC 1923
||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |
Sbjct 1857 TGTCGGGAACAAGCATGGCGACTCCTCATATAGCAGGGATTGGTGCGCTCATAAAACAAC 1916
Query 1924 TTAATCCTTCTTGGACTCCGGCCATGATTGCATCGGCCATCTCCACCACGGCCAACGAAT 1983
||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 1917 TTAATCCTTCTTGGACTCCAGCCATGATTGCATCTGCCATCTCCACCACGGCTAACGAAT 1976
Query 1984 ACGACAGTTCTGGTGAAGTTATATCAGCGGAGTCTTATGAAATAAGTGGATTATTTCCTT 2043
|||| ||| ||||||| ||||||||||||||| |||||| ||||| |||||||||| |
Sbjct 1977 ACGATAGTAATGGTGAAATTATATCAGCGGAGTATTATGAGCTAAGTAGATTATTTCCAT 2036
Query 2044 CTAATCATTTCGATCATGGCGCGGGCCATGTTAATCCTGCTAGAGCCTTAGATCCTGGAC 2103
|||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 2037 CTAATCATTTTGATCATGGTGCGGGCCATGTTAATCCTGCTAGAGCCCTAGATCCTGGAC 2096
Query 2104 TGGTTTTACCCGCTGGTTTTGAAGACTACATAAGTTTCTTGTGTTCACTGCCAAACATTA 2163
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2097 TAGTTTTACCCGCTGGTTTTGAAGACTACATAAGTTTCTTGTGCTCACTGCCAAACATTA 2156
Query 2164 ACCCGGTCACAATTCGAGCCGCAACTGGAGTCTCGTGCACCACTGCACTTAGCCACCCGG 2223
||| | ||| || |||| ||| || ||||||| ||| |||||| | ||||||||||| |
Sbjct 2157 GCCCAGCCACTATCCGAGACGCGACAGGAGTCTTGTGTACCACTACGCTTAGCCACCCAG 2216
Query 2224 CGAACCTTAACCATCCGTCAGTGACTATATCTGCCCTTAAAGAGTCACTTGTGGTGAGAA 2283
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 2217 CGAACCTTAACCATCCGTCAGTAACTATATCTGCACTTAAAGAGTCACTTGTGGTGAGAA 2276
Query 2284 GAAGTTTCCAAAACGTCTCAAACAAGACTGAGACATATCTTGGTTCGGTTTTACCTCCCA 2343
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 GAAGTTTCCAAGACGTCTCCAACAAGACTGAGACATATCTTGGTTCGGTTTTACCTCCCA 2336
Query 2344 ATGGTACAACTGTACGGTTAACCCCATCTTATTTTACCGTACCACCACAGAGAACTCAAG 2403
|||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||
Sbjct 2337 ATGGTACAACTGTACGGTTAACCCCAACTTGGTTTACCGTACCACCACAGAAAACTCAAG 2396
Query 2404 ATCTGGATATCGAATTCAATATCACACAAGTCTTAACCAAGTTCACATTTGGTGAAGTTG 2463
| || || |||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct 2397 ACCTAGACATCGAATTCAATGTCACACAAGTCTTAAACAAGTTTACATTTGGTGAAGTTG 2456
Query 2464 TTCTTACCGGAAGCTTAAACCATATTATAAGAATACCGTTGTCAGTTAAAACCATTTGAA 2523
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 TTCTTACTGGAAGCTTAAACCATATTATAAGAATACCGTTGTCAGTTAAAACCATTTGAA 2516
Query 2524 AACATAAAATTTTCTTGTT 2542
||||||||||||| |||||
Sbjct 2517 AACATAAAATTTTATTGTT 2535
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126169861645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5