BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924774 Length=1201 Score E Sequences producing significant alignments: (Bits) Value AT1G62280.1 | Symbols: SLAH1 | SLAC1 homologue 1 | chr1:2300714... 1749 0.0 > AT1G62280.1 | Symbols: SLAH1 | SLAC1 homologue 1 | chr1:23007147-23008585 REVERSE LENGTH=1365 Length=1365 Score = 1749 bits (947), Expect = 0.0 Identities = 1118/1202 (93%), Gaps = 6/1202 (0%) Strand=Plus/Plus Query 1 CTCTTTTTCATCGATAAACCGAGATGGAAATTCCTAGTCAAGAAATTCATATCAAAATTG 60 |||||||||||||||||||| ||||||||||||| || ||||||||||||||| |||| | Sbjct 23 CTCTTTTTCATCGATAAACCAAGATGGAAATTCCGAGGCAAGAAATTCATATCGAAATCG 82 Query 61 ATAACCCAATATCTAGTAGCAAAGAGTTAAAAACTGACCTCGCTGATGCTAACCCCGTTG 120 ||||| ||||| | ||||| |||||||| ||||||| ||| ||||||||||| ||||||| Sbjct 83 ATAACTCAATACCGAGTAGTAAAGAGTTTAAAACTGGCCTAGCTGATGCTAAACCCGTTG 142 Query 121 TCTTGATGTCCGTC-TTGCGTAGTCTCCACGCGGGCTATTTCAGAATTAGCCTCTCTGTG 179 |||||||||||| | ||||||||||||||||||||||||||||| || ||||||||| | Sbjct 143 TCTTGATGTCCG-CTTTGCGTAGTCTCCACGCGGGCTATTTCAGGATAAGCCTCTCTCTT 201 Query 180 TGCAGCCAAGCTCTACTGTGGAAGATAATGATCGCGCCTGATTCACCGAGCATGTCTCAT 239 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 202 TGCAGCCAAGCTCTTCTGTGGAAGATAATGATCGCGCCTGAGTCACCGAGCATGTCTCAT 261 Query 240 TTGCATAGCAAACTCCCATCTATGGCGTTCCATCTCTTGTGGTACTTAGCACTTGTAACA 299 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 ATGCACAGCAAACTCCCATCTATGGCGTTCCATCTCTTGTGGTACTTAGCACTTGTAACA 321 Query 300 CAAGTGTCACTATGTTTTTTGTATGCCTTAAAGTGTATTTTCTTATTTGACATGGTAAAG 359 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||| ||| ||| Sbjct 322 CAAGTGTCACTCTGTTTTTTGTATGCCTTGAAGTGCATTTTCTTCTTTGACAAGGTGAAG 381 Query 360 GAAGAGTTCTTGCACTATATTGGAGTGAACTATCTTTATGCTCCATCCATTTCATGGCTT 419 |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct 382 GAAGAGTTCTTGCACTATATCGGAGTGAACTATCTCTACGCTCCATCTATTTCATGGCTT 441 Query 420 CTCTTGCTTCAATCAGCTCCGATGATGGAACCAAACAGCGTTTTGTATCAAACACTATTC 479 ||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct 442 CTCATGCTTCAATCAGCTCCAATGATGGAACCAAATAGCGTTTTGTATCAGACACTATTC 501 Query 480 TGGGTGTTTGCTGTTCCAGTCTTCACACTAGACACAAAGCTTTATGGCCAGTGGTTCACA 539 ||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 502 TGGATCTTTGCTGTTCCAGTCTTGACACTAGACATAAAGCTTTATGGCCAGTGGTTCACA 561 Query 540 ACAGAGAAAAGGTTCTTGTCGATGCTAGCAAACCCCGCAAGCCAAGTATCCGTAATCGCA 599 || ||||| || || |||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 562 ACGGAGAAGAGATTTTTGTCGATGCTAGCAAACCCGGCAAGCCAAGTATCGGTAATCGCA 621 Query 600 AACCTCGTGGCTGCACGAGGAGCAGCAGAAATGGGTTGGAATGAGTGTGCTCTATGCATG 659 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 622 AACCTCGTGGCTGCACGAGGAGCAGCAGAGATGGGTTGGAATGAGTGTGCTCTATGCATG 681 Query 660 TTCTCCCTCGGAATGGTTCACTATTTGGTTATATTTGTCACCCTCTATCAACGGTTACCA 719 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 682 TTCTCACTCGGAATGGTTCACTATTTGGTTATCTTTGTCACCCTCTATCAACGCTTACCG 741 Query 720 GGCGGAAACAACTTCCCAACCAAGTTAAGGCCAATTTTCTTCTTGTTCTTTGCTGCACCA 779 || ||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| Sbjct 742 GGAGGAAACAACTTCCCAGCCAAGTTAAGGCCAATTTTCTTCTTGTTCGTCGCTGCACCA 801 Query 780 GCCATGGCAAGTCTAGCCTGGAACTCTATTTGTGGAACCTTTGATGCCGTAGCGAAAATG 839 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 802 GCCATGGCAAGTCTAGCCTGGAACTCTATTTGTGGAACTTTTGATGCCGTAGCGAAGATG 861 Query 840 TTGTTCTTCCTTTCACTTTTCATCTTCATGTCCCTGGTTTGTAGGCCAAATCTTTTTAAG 899 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 862 TTGTTCTTCCTTTCACTTTTCATCTTCATGTCCCTGGTCTGTAGGCCAAATCTTTTCAAG 921 Query 900 AAATCAATGAAAAGATTCAATGTTGCATGGTGGGCTTACTCGTTCCCCCTCACTTTTCTT 959 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct 922 AAATCAATGAAAAGATTCAATGTCGCGTGGTGGGCTTACTCGTTCCCACTCACTTTTCTT 981 Query 960 GCGCTAGACTCAGTTAAGTATGCGCAAGAGGTGAAAGA-CCAGGTCGGTTCTGGCTTTAT 1018 ||| ||||||| ||| |||||||||||||||||||||| || ||||||||||||||| || Sbjct 982 GCGTTAGACTCGGTTCAGTATGCGCAAGAGGTGAAAGATCC-GGTCGGTTCTGGCTTAAT 1040 Query 1019 GCTTATCTTCTCATCCATCTCAGTTTTAATCTTCCTTGGTATGATGGTACTGACAGCAGC 1078 ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1041 GCTTATCTTCTCATCTATCTCAGTTTTGATCTTCCTCGGTATGATGGTACTGACAGCAGC 1100 Query 1079 AAACAGCAATCGACTACTCAGACGTGATCAC-GTCCTCGGTTCTGCTACAGATCAAAAAG 1137 |||||||||| |||||||||||| |||| | || || |||||||||||||||| ||||| Sbjct 1101 AAACAGCAATAGACTACTCAGACACGATC-CTGTTCTTGGTTCTGCTACAGATCCAAAAG 1159 Query 1138 ACAAACAAATAACATTGTCGCTCAATGTGACTAACCAAAGCTAGTCTACACTTGAGATAG 1197 ||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 1160 ACAAACAAAAAACATTGTCGCTCAATGCGACTAACCAAAACTAGTCTACCCTTGAGATAG 1219 Query 1198 AA 1199 || Sbjct 1220 AA 1221 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58985640375 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5