BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924783
Length=1435
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 2104 0.0
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 1212 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 1009 0.0
AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 896 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 773 0.0
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 621 5e-177
AT1G61990.1 | Symbols: | Mitochondrial transcription terminati... 484 7e-136
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 390 2e-107
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 357 2e-97
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 281 1e-74
AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | ch... 252 8e-66
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 2104 bits (1139), Expect = 0.0
Identities = 1342/1440 (93%), Gaps = 13/1440 (1%)
Strand=Plus/Plus
Query 3 TGTCAATCGCATT-GTATTGTCATGTGTTCTTCTCTGA-TTCCTCATGGAAAAAGGTTGG 60
||||||||||||| |||| ||||||||||||||||| | |||||||||| ||||||||||
Sbjct 154 TGTCAATCGCATTGGTATAGTCATGTGTTCTTCTCT-AGTTCCTCATGGTAAAAGGTTGG 212
Query 61 TCCAGTTTCAGAAAGGGCATAACTTTAGTGTCTCAGTGAAGCTTTTCCAAAATGTATTCT 120
|||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||||
Sbjct 213 TCCAGTTTCAGAAAGGGCGTGACTTTAGTGTTTCAGTGAAGCTTTTGCAAAATGTATTCT 272
Query 121 CTGCTTTTTCCAATTCCTTCTCATCTGTTGCTAGTTCT-CATGATGTGAGCATTAGAGAT 179
||| |||||||||||| ||||| |||||||||| | || | |||||||||| ||||||||
Sbjct 273 CTGTTTTTTCCAATTCATTCTCTTCTGTTGCTACTGCTGC-TGATGTGAGCTTTAGAGAT 331
Query 180 GGTCGAAAAGGTAACAACTTTACAGTCTCTTACCTCATTGATTCACTT-GGTTTAACTAA 238
|||||||||||||||||||||| |||||||||||| |||||||| || |||||| ||
Sbjct 332 AGTCGAAAAGGTAACAACTTTACTGTCTCTTACCTCGTTGATTCA-TTGGGTTTAGCTTC 390
Query 239 AAAGCTCGCAGAGTCGATTTCAATAAAAGTCAGTTTCGAGAACAAGGCCAATCCTGATTC 298
|||||||||||| ||||| || || |||||||||||||||||||||| |||||||||| |
Sbjct 391 AAAGCTCGCAGAATCGATCTCGATGAAAGTCAGTTTCGAGAACAAGGGCAATCCTGATAC 450
Query 299 TGTTCTGAGTCTT-TTGAGAAGTCATGGGTTTACAGATTCTCAGATCTCCAACATCATTA 357
||||||| |||| || |||||||||| ||| ||||||||||||||||||| |||||||
Sbjct 451 AGTTCTGAATCTTCTT-AGAAGTCATGAGTTCACAGATTCTCAGATCTCCAGCATCATTT 509
Query 358 CGGATTATCC-ACTATTGCTCATAGCAGATGCTGAGAATTCCCTTGGTCCCAAGCTTAAG 416
|||||||||| || |||||| ||||||||||||| ||||| ||||||||||||||| |
Sbjct 510 CGGATTATCCAAC-ATTGCTTGTAGCAGATGCTGAAAATTCACTTGGTCCCAAGCTTCTG 568
Query 417 TTGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCT 476
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 569 TTGATGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCT 628
Query 477 AAAATCTTAGCAATGAAAGGGGACAAAAGTATCAGCAGATACTATGATATCGTCAAAGAG 536
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 629 AAAATCTTAGGAATGAAAGGGGACAAAAGTATCGGCAGATACTATGATATCGTCAAAGAG 688
Query 537 ATTGTAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTGTGTCATTCTTTGCCAGAGGGT 596
||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||
Sbjct 689 ATTATAGAAGCGGATAAGAGCTCCAAGTTCGAAAAGCTGTGTCATTCTTTGCCTGAGGGT 748
Query 597 AGTAAGCAGGAGAATAAAATCAGAAATGTTTTGGTTTTGAGAGAATTGGGCGTGCCTCAA 656
||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct 749 AGTAAGCAGGAGAATAAAATCAGGAATGTATTGGTTTTGAGAGATTTGGGTGTGCCTCAA 808
Query 657 AGGTTGTTATTCTCCTTGCTCATCTCTAATCACCATGTCTGCTGTGGAAAAGAAAAATTT 716
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 809 AGGTTGTTATTCTCATTGCTCTTCTCTAATCACCATGTCTGCTGTGGAAAAGAAAAGTTT 868
Query 717 GAAGAATCACTCGAGAAGGTTGTTGGGATGGGTTTTGATCCCACCACCCCAAAGTTTGTG 776
|||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 869 GAAGAATCACTCAACAAGGTTGTTGGGATGGGTTTTGATCCCACCACTCCAAAGTTTGTG 928
Query 777 GAAGCCTTATGCATTGTTTACGGATTGAGCGACAAAAGGCTAGAAGAAAACTTCAATGTC 836
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 929 GAAGCTTTATGCATTGTTTACGGATTGAGCGACAAAAGACTAGAAGAAAACTTCAATGTC 988
Query 837 TATAAAAGGTTCGGCTTAACTGTAAACGATATATGGGAACTTTTCAAGAAGTGCCCTGCC 896
|| || || || |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 989 TACAAGAGATTTGGCTTAACTGTAAACGATGTATGGGAACTTTTCAAGAAGTGCCCTGCC 1048
Query 897 TTTCTTGGATACTCAGAGAATAGGATAATTCAGACATTTGAAGCCTTAAAGAGGTGTGGT 956
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 TTTCTTGGATACTCTGAGAATAGGATAATTCAGACATTTGAAGCCTTAAAGAGGTGTGGT 1108
Query 957 CTGTGCGAAGATGAGGTCA-TGTCAGTGTTCAAGAAGAATCCACTATGCTTACGTGCTTC 1015
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 CTGTGCGAAGATGAGGT-ATTGTCAGTGTTCAAGAAGAATCCACTATGCTTACGTGCTTC 1167
Query 1016 AGAGCAGCAGATATTGAATTCCATGGAAACATTTATTGGCTTAGGATTTAGCAGAGATGA 1075
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1168 AGAGCAGCAGATATTGAACTCCATGGAAACATTTATAGGCTTAGGATTCAGCAGAGATGA 1227
Query 1076 GTTTGTGATGATGGTCAAGCGCTTTCCTCAGTGCATTGGATATTCTGCAGAGATGGTGAA 1135
|||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1228 GTTTGTCATGATGGTCAAGTGCCTTCCTCAGTGCATTGGATATTCTGCAGAGATGGTGAA 1287
Query 1136 GAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTAAAGGTCATAACTTTGTT 1195
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1288 GAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTTAAGGTCATTACTTTGTT 1347
Query 1196 CCCTCAGGTACTTGGATACAGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAATCAA 1255
|||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1348 CCCTCAGGTACTTGGATATAGCATGGAGAAGAGGACTGTCCCAAGGTGTAATGTAATCAA 1407
Query 1256 AGCTCTTATGTCCAAAGGATCGCTTGGAAGCGAACTCCCTCCAATGCCGTCTGTCTTGGC 1315
|||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||
Sbjct 1408 AGCTCTCATGTCCAAAGGATTGCTTGGAAGCGAACTCCCTCCAATGGCGTCTGTTTTGGC 1467
Query 1316 ATGTACCGATCAGACCTTCTTAAACAGGTATGTGGTGGAGCATGATGAAAAGCTGGTGCT 1375
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1468 ATGTACCGATCAGACCTTCTTAAAAAGGTATGTGGTTGAGCATGATGAAAAGCTGGTGCT 1527
Query 1376 TCAGTTGATGGCTATCTTCAACCAAGATCGTATCTCATAGCACAGAGAGGTTGTGTCAAG 1435
| |||||||| |||||||||||||||| ||| |||||||||| |||||| ||||||||||
Sbjct 1528 TGAGTTGATGTCTATCTTCAACCAAGACCGTGTCTCATAGCATAGAGAGCTTGTGTCAAG 1587
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 1212 bits (656), Expect = 0.0
Identities = 1173/1415 (83%), Gaps = 65/1415 (5%)
Strand=Plus/Plus
Query 32 TTCTCTGATTCCT-CATGGAAAAAGGTTGGTCCAGTTTCAGAAAGGGCATAACTTT-AGT 89
|||||||| | || ||||||||||||||||||||||| ||||| | | | | ||| ||
Sbjct 6 TTCTCTGA-TACTCCATGGAAAAAGGTTGGTCCAGTTGAAGAAATGTCGTCA-TTTAAGC 63
Query 90 G-TCTCAGTGAAGCTTTTCCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTCATCTGT 148
| || ||||||| || || |||| | | |||| ||||||||||||||||||| ||
Sbjct 64 GTTC-CAGTGAACCTCCTCGAAAAGGCA-TCTC--CTTTTTCCAATTCCTTCTC--CT-A 116
Query 149 TGCTAGTTCT-CATGATGTGAGCATTAGAGATGGTCGAAAA-GGTAACAACTTTACAGTC 206
||||| | || || |||| |||| |||||| |||||||||| ||| | ||| | |||
Sbjct 117 TGCTAATGCTACA-GATGCGAGCCTTAGAGCTGGTCGAAAAGGGT-TGAGTTTTTCTGTC 174
Query 207 TCTTACCTCATTGATTCACTT-GGTTTAACTAAAAAGCTCGCAGAGTCGATTTCAATA-A 264
||||||||| |||||||| || |||||| |||||||| ||||||| ||||| |||| | |
Sbjct 175 TCTTACCTCGTTGATTCA-TTGGGTTTACCTAAAAAGGTCGCAGAATCGATCTCAA-AGA 232
Query 265 AAGTCAGTTTCGAGAAC-AAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCAT 323
||||||| |||||| || |||| |||||||||||||||||||||||| ||||||||||||
Sbjct 233 AAGTCAGCTTCGAGGACAAAGG-CAATCCTGATTCTGTTCTGAGTCTATTGAGAAGTCAT 291
Query 324 GGGTTTACAGATTCTCAGATCTCCAA-CATCATTACGGATTATCCACTATTGCTCA-TAG 381
||||| || ||||||||||||| ||| |||||||||||||||||||| |||||| | |||
Sbjct 292 GGGTTCACTGATTCTCAGATCT-CAAGCATCATTACGGATTATCCACAATTGCT-AGTAG 349
Query 382 CAGATGCTGAGAATTCCCTTGGTCCCAAGCTTAAGTTGCTGCAGTCAAGAGGAGCTTCAA 441
| ||||||||||| || |||||||||||||| |||| |||||||| |||||||||||||
Sbjct 350 CTGATGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAA 409
Query 442 GCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTT-AGCAATGAAAGGGGAC 500
| |||||||||||| | ||||| |||| ||||||| ||||||| | || || |||||||
Sbjct 410 GGTCTGAGCTCACTCATATTGTATCTACAGTTCCTGAAATCTTGGGGAA-GAGAGGGGAC 468
Query 501 AAAAGTATCAGCAGATACTATGATATCGTCAAAGAGATTGTAGAAGCGGATAAGAGTTCC 560
|||| |||||||| |||||||||| | || ||||||||| ||||||||||||||||||||
Sbjct 469 AAAACTATCAGCATATACTATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGAGTTCC 528
Query 561 AAGTTCGAAAAGTTGTGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATCAGA 620
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 529 AAGTTCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGA 588
Query 621 AATGTTTTGGTTTTGAGAGAATTGGGCGTGCCTCAAAGGTTGTTATTCTCC-TTGCTCAT 679
|||||||||||||||||||||||||| || |||||||||||||| ||| || ||||| ||
Sbjct 589 AATGTTTTGGTTTTGAGAGAATTGGGTGTTCCTCAAAGGTTGTTGTTC-CCATTGCTTAT 647
Query 680 CTCTAATCACCATGTCTG-CTGTGGAAAAGAAAAATTTGAAGAATCACTCGAGAAGGTTG 738
||| ||||||| ||| ||||||||||||||| ||||||||||||||| |||| ||||
Sbjct 648 ATCTGATCACCAAC-CTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTTG 706
Query 739 TTGGGATGGGTTTTGATCCCACCACCCCAAAGTTTGTGGAAGC-CTTATGCATTGTTTAC 797
||| ||||||||||||||| |||||| |||||||||| |||| |||| | ||||||||
Sbjct 707 TTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCAAAGCTCTTAGGG-TTGTTTAC 765
Query 798 GGATTGAGCGACAAAAGGCTAGAAG-AAAACTTCAATGTCTATAAAAGGTTCGGCTTAAC 856
|||| ||||||||| |||||| |||| || ||||||| |||||| || ||||| |
Sbjct 766 AGATTCCGCGACAAAACTATAGAAGCAAAAGTT-AATGTCTGTAAAAGTTTAGGCTTTTC 824
Query 857 TGTAA-ACGATATATGGG-AACT-TTTCAAGAAGTGCCCTGCCTTTCTTGGATA-CTCAG 912
||| | ||| |||||| || | ||| |||||||| ||| ||||||| | || ||| |
Sbjct 825 TGTTGGA-GATGTATGGGCAA-TGTTT-AAGAAGTGTCCTTCCTTTCT-GAATTTCTCTG 880
Query 913 AGAATAGGATAATTCAGACATTTG-AAGCCTTAAAGAGGTGTGGTCTG-TGCGAAGATGA 970
|||| | |||| |||| || || | || || | |||| |||||| || | |||||| ||
Sbjct 881 AGAACAAGATAGTTCAAAC-TTGGGAAACCCTGAAGAAGTGTGGACTACT-CGAAGACGA 938
Query 971 GGTCATGTCAGTGTTCAAGAAGAATCCACTATGC-TTACGTGCTTCAGAGCAGCAGATAT 1029
||| | |||||||| |||||| ||||| |||| ||| ||||||||||||| |||||
Sbjct 939 TGTCCTCTCAGTGTTGAAGAAGTTTCCACAATGCATTAA-TGCTTCAGAGCAGAAGATAA 997
Query 1030 TGAATTCCATGGAAACATTTATTGGCTTAGGATTTAGCAGAGATGAGTTTGTGATGATGG 1089
|||| ||||| ||||||||| | |||||||||||||||||||||||| ||| ||||| |
Sbjct 998 TGAACTCCATTGAAACATTTCTAGGCTTAGGATTTAGCAGAGATGAGGTTGCAATGATAG 1057
Query 1090 TCAAGCGCTTTCCTCAGTGCATTGGAT-ATTCTGCAGAGATGGTGAAGAAGAAGACTGAG 1148
||||||||||||||| ||| || | || ||||||||| |||||||| |||||||||
Sbjct 1058 CCAAGCGCTTTCCTCAATGCCTTATTTTAT-CTGCAGAGACAGTGAAGAAAAAGACTGAG 1116
Query 1149 TTTGTGGTGAAGAAGATGAATTGGCCACTAAAGG-TCATAACTTTGTTCCC-T-CAGGTA 1205
||| |||||||||||||||||||||||||||||| | | ||| ||| | | ||||
Sbjct 1117 TTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTG-TGG-TTTCAACCCCTGC-GGTA 1173
Query 1206 CTTGGATACAGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATG 1265
|||||||||||| | |||||||||| | ||||||||||||| ||||| |||||||| |||
Sbjct 1174 CTTGGATACAGCTTAGAGAAGAGGACTATCCCAAGGTGTAATGTAATTAAAGCTCTCATG 1233
Query 1266 TCCAAAGGATCGCTTGGAAGCGAACTCCCTCCAATGCCGTCTGTCTTGGCATGTACCGAT 1325
|||||||||||||||||||| ||||||||| |||| ||||||| |||| ||||||| ||
Sbjct 1234 TCCAAAGGATCGCTTGGAAGTGAACTCCCTGGAATGTCGTCTGTTTTGGTATGTACCAAT 1293
Query 1326 CA-GACCTTCTTAAACAGGTATGTGGTGGAGCATGATGA-AA-A-GCTGGTGCTTCAGTT 1381
| || |||||| |||||||||| | | |||||||| || | | | || | | ||||
Sbjct 1294 GAAGAA-TTCTTATGCAGGTATGTGAAGAACCATGATGACAAGAAGATAGTACCTGAGTT 1352
Query 1382 GATGGCTATCTTCAACCA-AGATCGTATCTCATAG 1415
||||||||| |||| || |||||| | ||||||
Sbjct 1353 GATGGCTATTTTCA-CCGGAGATCGCGTTTCATAG 1386
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 1009 bits (546), Expect = 0.0
Identities = 1101/1355 (81%), Gaps = 93/1355 (7%)
Strand=Plus/Plus
Query 123 GCTTTTTCCAATTCCTTCTCATCTGT-TGCTAGTTCTCA-TGATGTGAGCAT-TAGAGAT 179
|||||||| |||||| | | ||| | ||||||| || | |||| ||||| | ||||||
Sbjct 314 GCTTTTTCTAATTCC-TAT--TCT-TCTGCTAGTGCT-ACTGATTTGAGC-TCAAGAGAT 367
Query 180 GGTCGAAAAGGT-AACAACTTTACAGTCTCTTACCTCATTGATTCACTT-GGTTTAACTA 237
||||||||| || || |||||||| |||||||||||| |||||||| || |||||| |||
Sbjct 368 GGTCGAAAA-GTGAAGAACTTTACTGTCTCTTACCTCGTTGATTCA-TTGGGTTTAGCTA 425
Query 238 -AAAAGCTCGCAGAGTCGATTTCAATA-AAAGTCAGTTTCGAGAACAAGGCCAATCCTGA 295
|||| ||||| || || || |||| | ||||||||||||| |||||||| |||||||||
Sbjct 426 CAAAA-CTCGCTGAATCAATCTCAA-AGAAAGTCAGTTTCGTGAACAAGGGCAATCCTGA 483
Query 296 TTCT-GTTCTGAGTCTTTTGAGAAGTCATGGGTTTACAGATTCTCAGATCTCCAACATCA 354
|| | |||||||||||||| |||||| ||||||| ||| ||||||||||||||| |||||
Sbjct 484 TT-TAGTTCTGAGTCTTTTTAGAAGTTATGGGTTCACAAATTCTCAGATCTCCAGCATCA 542
Query 355 TTACGGATTATCC-ACTATTGC-TCATAGCAGATGCTGAGAATTCCCTTGGTCCCAAGCT 412
||||||||||||| | ||||| || || |||||||||||| || |||| | ||||||
Sbjct 543 TTACGGATTATCCTA-GATTGCTTC-TAATAGATGCTGAGAAATCACTTGATATCAAGCT 600
Query 413 TAAGTTGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGT 472
| |||| || |||| ||||||||||||||| ||||||||||| |||||||||||| |||
Sbjct 601 TCAGTTTTTGGAGTCTAGAGGAGCTTCAAGCCCTGAGCTCACTCAGATTGTTTCTACAGT 660
Query 473 TCCTAAAATCTTAGCAATGAAAG-GGGACAAAAGTATC-A-GCAGATACTATGATATCGT 529
||||||||| || | |||||||| ||| ||||| || | |||||||||||||| ||||
Sbjct 661 TCCTAAAATATTGGGAATGAAAGAGGG---AAAGTCTCTAGGCAGATACTATGATTTCGT 717
Query 530 CAAAGAGATTGTAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTGTGTCATTCTTTGCC 589
|||||||||| ||||||| |||||||||||||||| ||||| |||||||| |||||||
Sbjct 718 CAAAGAGATTATAGAAGCAGATAAGAGTTCCAAGTACGAAACTTTGTGTCAACCTTTGCC 777
Query 590 AGAGGGTAGTAAGCAGGAG-AATAAAATCAGAAATGTTTTGGTT-TTGAGAGAATTGGGC 647
||||| || || ||||| | ||||||||||||||||||| |||| || ||||| |||||
Sbjct 778 AGAGGCTAATAGGCAGG-GTAATAAAATCAGAAATGTTTCGGTTCTT-AGAGACTTGGGT 835
Query 648 GTGCCTCA-AAGGTTGTTATTCTCCTTGCTCATCTCTAAT-CACCATGTCTG-CTGTGGA 704
|||||||| || ||||||||||||||||||||||||| || | ||| ||| ||||||
Sbjct 836 GTGCCTCAGAA-GTTGTTATTCTCCTTGCTCATCTCTGATGC-CCA-ACCTGTTTGTGGA 892
Query 705 AAAGAAAAATTTGAAGAATCACTCGAGAAGGTTGTTGGGATGGGTTTTGATCCCACCACC 764
|||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||||
Sbjct 893 AAAGAAAATTTTGAAGAATCACTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACC 952
Query 765 CCAAAGTTTGTGGAAGC-CTTATGCATTGTTTACGGATTGAGCGACAAAAGGCTAGAAGA 823
|||||||||| |||| |||| | ||||||| |||| | |||||||| |||||||
Sbjct 953 TCAAAGTTTGTCCAAGCTCTTA-GGGCTGTTTACAGATTCACCGACAAAACAATAGAAGA 1011
Query 824 AA-ACTTCAATGTCTATAAAAGGTTCGGCTTAACTGT-AAACGATATATGGG-AACTTTT 880
|| | || ||||| |||||| |||||||||| |||| || ||| |||||| || | ||
Sbjct 1012 AAGAGTT-AATGTGTATAAAGGGTTCGGCTTTGCTGTGGAA-GATGTATGGGCAA-TGTT 1068
Query 881 CAAGAAGTGCCCTGCCTTTCTTGGATA-CTCAGAGAATAGGATAATTCAGACATTTGAAG 939
|||||| || ||| |||| ||| ||| || ||||| | ||| ||||||| |||||
Sbjct 1069 CAAGAAATGTCCTTACTTT-TTGAATAGTTCGGAGAAGAAGATTGGTCAGACAATTGAAA 1127
Query 940 CCTTAAAGAGGTGTGGTCT-GTGCGAAGATGAGGTCATGTCAGTGTTCAAGAAGAATCCA 998
|| | |||| |||||| || | |||||| |||||||| |||||||| || ||| ||||
Sbjct 1128 CCCTGAAGAAGTGTGGACTACT-CGAAGACGAGGTCATCTCAGTGTTGAAAAAGTATCCG 1186
Query 999 CTA-TGC-TTACGTGCTTCAGAGCAGCAGATATTGAATTCCATGGAAACATTTATTGGCT 1056
| | ||| || || ||||||||||| |||||||||| ||||| |||| |||| | |||
Sbjct 1187 C-AGTGCATT-GGTACTTCAGAGCAGAAGATATTGAACTCCATTGAAATATTTCTAGGCC 1244
Query 1057 TAGGATTTAGCAGAGATGAGTTTGTGATGATGGTCAAGCGCTTTCCTCAGTG-CATTGGA 1115
|||| || |||||||||||||| | | ||||| ||||||||||||||||| | || |
Sbjct 1245 TAGGCTTCAGCAGAGATGAGTTCATAACAATGGTTAAGCGCTTTCCTCAGTGTC-TT--A 1301
Query 1116 -TAT-TCTGCAGAGATGGTGAAGAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGC 1173
| | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1302 TTTTATCTGCAGAGACGGTGAAGAAGAAGATTGAGTTTGTGGTGAAGAAGATGAATTGGC 1361
Query 1174 CACTAAAGG-TCATAACTTTGT--TCCCT-CAGGTACTTGGATACAGCATGGAGAAGAGG 1229
|||| |||| | | ||| ||| | | |||||||||||||| | |||||||||||
Sbjct 1362 CACTGAAGGATG-TGG-TTTCAAATCC-TAC-GGTACTTGGATACAACCTGGAGAAGAGG 1417
Query 1230 ATTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATGTCCAAAGGA-T-C--G----CTT- 1280
| ||||||||||||||| || || ||||||| ||||| ||| || | | | |
Sbjct 1418 ACTGTCCCAAGGTGTAATGTTATTGAAGCTCTCATGTCAAAAAGACTTCTCGGAGACACA 1477
Query 1281 GGAAGCGAACTCCCTCCAATGCCGTCTGTCTTGGCATGTACCGATCAGACCTTCTTAAAC 1340
||||| ||||||||||||||| ||||||| |||| |||||| ||| || ||||||||
Sbjct 1478 GGAAGTGAACTCCCTCCAATGTCGTCTGTTTTGGTATGTACTGATGAGTTGTTCTTAAAA 1537
Query 1341 AGGTATGTGGTGGAGC-ATGATGA-AA--AGCTGGTGCTTCAGTTGATGGCTATCTT-CA 1395
||||||||| ||| | ||| ||| || ||||||||||| |||||||| |||| || ||
Sbjct 1538 AGGTATGTGA-GGAACCATGGTGACAAGGAGCTGGTGCTTGAGTTGATGACTAT-TTACA 1595
Query 1396 ACCA-AGATCGT--ATC-TCATAGCA-CAGAGAGG 1425
||| || |||| ||| |||||| | |||| |||
Sbjct 1596 -CCAGAGGTCGTGTATCATCATAG-ATCAGA-AGG 1627
> AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902150-22903837 FORWARD
LENGTH=1688
Length=1688
Score = 896 bits (485), Expect = 0.0
Identities = 1054/1317 (80%), Gaps = 85/1317 (6%)
Strand=Plus/Plus
Query 120 TCTGCTTTTTCCAATTCCTTCTCATCTGTTGCTAGT-TCT-CATGATGTGAGCATTAGAG 177
|||||||| |||||||||||||| | | |||||||| | | | ||||| || | ||| ||
Sbjct 171 TCTGCTTTGTCCAATTCCTTCTC-T-T-TTGCTAGTGT-TGC-TGATGCGACCCTTATAG 225
Query 178 ATGGTCGAAAAGGTAACAACTTTACAGTCTCTTACCTCA-TTGATTCACTTGG-TTTAAC 235
|| | | ||||||||||||||||||||||||||||| | |||||||| |||| ||||||
Sbjct 226 ATAGCCTTAAAGGTAACAACTTTACAGTCTCTTACCT-AGTTGATTCA-TTGGGTTTAAC 283
Query 236 TAAAAAGCTCGCAGAGTCGATTTC-AATAAAAGTCAGTTTCGAGAACAAGGCCAA-TCCT 293
| |||||||||||| ||||| || || ||| || || |||||| | | || || |||
Sbjct 284 CACAAAGCTCGCAGAATCGATCTCCAAGAAA-GTAAGCTTCGAGGAGA-GGAGAAATCCG 341
Query 294 GATTCTGTTCTGAGTCTT-TTGAGAAGTCATGGGTTTACAGATTCTCAGATCTCCAAC-A 351
|||||||||||||||||| || | |||| ||||||| ||| | |||||||| || || |
Sbjct 342 GATTCTGTTCTGAGTCTTCTT-ACAAGTTATGGGTTCACAAAGTCTCAGATTTC-AAGTA 399
Query 352 TCATTACGGAT-TATCCACTATTGCT--CATAGCAGATGCTGAGAATTCCCTTGGTCCCA 408
||||||| || || |||| |||||| ||| |||||||||||| ||| ||| |||||
Sbjct 400 TCATTACT-ATCTACCCACGATTGCTTGCATT--AGATGCTGAGAAATCCATTGCTCCCA 456
Query 409 AGCTTAAGT-TGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCT 467
||||| ||| | |||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 457 AGCTTCAGTCT-CTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTCAGATTGTTTCT 515
Query 468 AAAGTTCCTAAAATCTTAGC-AATGAAAGGGGACAAAAGTATCAGCAG-ATACTATGATA 525
| |||||||||||||| | || || |||| ||||| ||| | | | ||||||||||
Sbjct 516 ACTGTTCCTAAAATCTTGGGGAA-GAGAGGGCACAAATCTATAA-CTGTATACTATGATT 573
Query 526 TCGTCAAAGAGATTGTAGAAGCGGATAAGAGTTCCAAGTT-CGAAAAGTTGTGTCATTCT 584
|||||||||| ||| ||||||| ||||||||||| | ||| ||||||||| |||||||||
Sbjct 574 TCGTCAAAGACATTATAGAAGCTGATAAGAGTTCTA-GTTACGAAAAGTTATGTCATTCT 632
Query 585 TTGCCAGAGGGTAGTAAGCAGGAGAATAAAATCAGAAATGTTT-TGGTTTTGAGAGAATT 643
|| ||| |||||| ||| | ||||||| ||||||||| | | || |||||||||||||
Sbjct 633 TTTCCACAGGGTAACAAG-A--AGAATAAGATCAGAAATATCTCTG-TTTTGAGAGAATT 688
Query 644 GGGCGTGCCTCAAAGGTTGTTATTCTCCTT-GCTCATCTCTA-ATCACCATGTCTG-CTG 700
||| ||| |||| | ||||||||| |||| ||||||||| | || ||| ||| |||
Sbjct 689 GGGTGTGGCTCAGCGTTTGTTATTC-CCTTTGCTCATCTC-AGATGGCCAAC-CTGTCTG 745
Query 701 TGGAAAAGAAAAATTTGAAGAATCACTCGAGAAGGTTGTTGGGATGGGTTTTGATCCC-A 759
||| ||||||| |||||||||||| ||| |||||||||||| ||||||||||||||| |
Sbjct 746 TGGTAAAGAAAGATTTGAAGAATCTCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCGGA 805
Query 760 CCACCCCAAAGTTTGTGGAAGCCTTATGC-A-TTGTTTACGG-ATTGAGCGACAAAAGGC 816
|| ||||||| || ||||| | ||| | || ||||| | || ||| |||||||
Sbjct 806 G-ACTACAAAGTTCGTTGAAGC-TC-TGCGAGTTATTTACCGTAT-GAGTGACAAAACAA 861
Query 817 TAGAAGAAAACTTCAATGTCTATAAAAGGTTCGGCTTAACTGTAAAC-GATATATGGG-A 874
|||||||||| |||||||||| |||||||| ||||| ||| | ||| |||||| |
Sbjct 862 TAGAAGAAAAAGTCAATGTCTACAAAAGGTTAGGCTTTGGTGTGG-CTGATGTATGGGCA 920
Query 875 ACTTTTCAAGAAGTGCCCTGCCTTTCTTGG-ATACTCAGAGAATAGGATAATTCAGACAT 933
| | ||||||||||| ||| | ||| ||| |||||||||||| | ||||| ||| || |
Sbjct 921 A-TCTTCAAGAAGTGGCCTTCTTTT-TTGTCATACTCAGAGAAGAAGATAACTCATACTT 978
Query 934 TTGAAGCC-TTAAAGAGGTGTGGTCTG-TGCGAAGATGAGGTCATGTCAGTGTTCAAGAA 991
||||| || |||| ||| ||||||||| | || | |||||| ||| | |||| |||||
Sbjct 979 TTGAAACCCTTAA-GAGTTGTGGTCTGCTTA-AACACGAGGTCCTGTTATTGTTGAAGAA 1036
Query 992 GAATCCACTATGC-TTACGTGCTTCAGAGCAGCAGATAT-TGAATTCCATGGAAACATTT 1049
| ||||| |||| || || ||||||||||| |||| | |||| ||||| ||||||||
Sbjct 1037 GCATCCAAAATGCATTT-GTTCTTCAGAGCAGAAGAT-TGTGAACTCCATAGAAACATTC 1094
Query 1050 ATT-GGCTTAGGATTTAGCAGAGATGAGTTTGTGATGATGGTCAAGCGCTTTCCTCAGTG 1108
|| ||| ||||||| |||||||||||||||| ||||||||||||||| | |||||||||
Sbjct 1095 -TTAGGCCTAGGATTCAGCAGAGATGAGTTTGCGATGATGGTCAAGCGATATCCTCAGTG 1153
Query 1109 CATTGGA-TATTCTGCAGAGATGGTGAAGAAGAAGACTGAGTTTGTGGTGAAGAAGATGA 1167
||||| | ||| |||| |||| ||||||||||| ||||||||| | |||||||| ||||
Sbjct 1154 CATTG-ACTATACTGCTGAGACAGTGAAGAAGAAAACTGAGTTTATTGTGAAGAATATGA 1212
Query 1168 ATTGGCCACTAAAGGTCATAACTTT-GTTCCCTCAGGTACTTGGATACAGCATGGAGAAG 1226
||||||||||| ||| | | ||| | ||||||||||| ||||||||||| ||||||||
Sbjct 1213 ATTGGCCACTAGAGG-CTTTGGTTTCGATCCCTCAGGTATTTGGATACAGCCTGGAGAAG 1271
Query 1227 AGGATTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATGTCCAAAGGA-TCGCTTGGAAG 1285
|| | ||||||||||||||| ||||||||| |||| || || |||||| | | | | |||
Sbjct 1272 AGAACTGTCCCAAGGTGTAATGTAATCAAAACTCTCATCTCAAAAGGACT-GAT-GAAAG 1329
Query 1286 -CG-AACT----CCC-TCCAATGCCGTCTGTCTTGGCATGTACCGATCAGACCTTCTTAA 1338
|| || | ||| ||||||| | ||||| || || ||||||||||| | || ||||
Sbjct 1330 ACGGAAGTGAAGCCCCTCCAATGTCATCTGTTTTAACAAGTACCGATCAGGCGTTTTTAA 1389
Query 1339 ACAGGTATGTGGTGGAGCATGATGAAAAGCTGGTGCTTCAGTTGATGGCTATCTTCA 1395
||||||||| || |||| || || | ||| | | ||||||||||||||||||
Sbjct 1390 GGAGGTATGTGATGAAGCACGAC-AA--GTTGGCACCTGAGTTGATGGCTATCTTCA 1443
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 773 bits (418), Expect = 0.0
Identities = 734/880 (83%), Gaps = 47/880 (5%)
Strand=Plus/Plus
Query 32 TTCTCTGATTCCT-CATGGAA-AAAGGTTGGTCCAGTTTCAGAAAGGGCATAACTTT-AG 88
|||||||||| || ||||||| ||| |||||||||||| |||||| ||| | ||| ||
Sbjct 146 TTCTCTGATT-CTCCATGGAAGAAA-GTTGGTCCAGTTGCAGAAATGGCGCCA-TTTGAG 202
Query 89 TGTCTCAGTGAAGCTTTTCCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTCAT-CTG 147
|| |||||||| ||||| ||||||| | || |||||||||||| ||||||| | ||
Sbjct 203 GGTTTCAGTGAATCTTTTTCAAAATGGA---TCAGCTTTTTCCAATACCTTCTCCTCCT- 258
Query 148 TTGCTAGTT-CT-CATGATGTGAGCAT-TAGAGATGGTCGAAAAGGTAACAACTTTACAG 204
||||| || || | |||||||||| | |||||||||||||||||| ||||||||||||
Sbjct 259 CTGCTA-TTGCTGC-TGATGTGAGC-TCAAGAGATGGTCGAAAAGGTCACAACTTTACAG 315
Query 205 TCTCTTACCTCATTGATTCACTT-GGTTTAACTA-AAAAGCTCGCAGAGTCGATTTCAAT 262
| ||||||||| |||||||| || |||||| ||| ||||| |||| || ||||| || ||
Sbjct 316 TTTCTTACCTCGTTGATTCA-TTAGGTTTAGCTACAAAAG-TCGCTGAATCGATCTCCAT 373
Query 263 AAAAGTCAGTTTCGAGAACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCA 322
|||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 374 GAAAGTCAGTTTCGATAACAAGGGCAACCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCA 433
Query 323 TGGGTTTACAGATTCTCAGATCTCCAACATCATTACGGA-TTATCC-ACTATTGCTCATA 380
|||||| || ||||||||||||||||||||||||| ||| || ||| | |||||| ||
Sbjct 434 TGGGTTCACTGATTCTCAGATCTCCAACATCATTA-GGACTT-TCCCAAGATTGCTTATC 491
Query 381 GC-AGATGCTGAGAATTCCCTTGGTCCCAAGCTTAAGTTGCTGCAGTCAAGAGGAGCTTC 439
| |||||||||||| ||||||| |||||||||| |||| |||||||| | ||| |||||
Sbjct 492 -CTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCTTC 550
Query 440 AAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTTAGC-AAT-GAAAGGG 497
||||||||||||||| |||| ||||||| |||||| ||||| || | || |||||||
Sbjct 551 AAGCTCTGAGCTCACCGAGACTGTTTCTGCAGTTCCGAAAATATTGGGGAAGAGAAAGGG 610
Query 498 GACAAAAGTATCAGCAGATACTATGATATCGTCAAAGAGATTGTAGAAGCGGATAAGAGT 557
|||| | ||||||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct 611 --CAAATCTCTCAGCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGGATAAGAGT 668
Query 558 TCCAAGTTCGAAAAGTTGTGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATC 617
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 669 TCCAAGTTAGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATC 728
Query 618 AGAAATGTT-TTGGTTTTGAGAGAATTGGGCGTGCCTCAAAGGTTGTTATTCTCCTTGCT 676
|||||| || ||||| ||||||||| |||| |||||||| |||||||||||||| |||||
Sbjct 729 AGAAAT-TTATTGGTGTTGAGAGAAATGGGTGTGCCTCAGAGGTTGTTATTCTCATTGCT 787
Query 677 CATCTCTAATCACC--ATGTCTGCT-GTGGAAAAGAAAAATTTGAAGAATCACTCGAGAA 733
|| || || || | | || | |||| |||||||||||| ||||||||||| ||||
Sbjct 788 TATATCCGATG-CCGGA-GA-TGTTTGTGGTAAAGAAAAATTTAAAGAATCACTCAAGAA 844
Query 734 GGTTGTTGGGATGGGTTTTGATCCCACCACCCCAAAGTTTGTGGAAGC-CTTATGCATTG 792
|| ||||| ||| ||||||||||| |||||| ||| ||||| |||| |||| | ||
Sbjct 845 GGCTGTTGAGATTGGTTTTGATCCAACCACCGCAACTTTTGTCAAAGCTCTTAA-CGTTC 903
Query 793 TTTACGGATTGAGCGACAAAAGGC-TAGAAGA-AAACTTCAATGTCTATAAAAGGTTCGG 850
|||||||||| ||||||||| || | ||| | ||| ||||||| || ||||||||| ||
Sbjct 904 TTTACGGATTAAGCGACAAA-GGAATTGAAAATAAA-TTCAATGCCTGTAAAAGGTTAGG 961
Query 851 CTTAACTGTAAACGATATATGGG-AACTTTTCAAGAAGTG 889
||| |||| ||||| |||||| || | |||||||||||
Sbjct 962 CTTGGCTGTGGACGATGTATGGGCAA-TGTTCAAGAAGTG 1000
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 621 bits (336), Expect = 5e-177
Identities = 619/750 (83%), Gaps = 41/750 (5%)
Strand=Plus/Plus
Query 120 TCTGCTTTTTCCAATTCCTTCTCATCTG-TTGCTAGTTCT-CATGATGTGAG-CATTAGA 176
||| |||| |||||||||||||| |||| || || | || | | | |||| | ||||
Sbjct 199 TCTCCTTTGTCCAATTCCTTCTCCTCTGCTT-CT-G--CTGCGCG-TTTGAGTC-CTAGA 252
Query 177 GATGGTCGAAAAGGTAACAACTTTACAGTCTCTTACCTCATTGATTCACTT-GGTTTAAC 235
| ||||||||||||||| | ||||||||||||||||||| |||||||| || |||||| |
Sbjct 253 GTTGGTCGAAAAGGTAAGAGCTTTACAGTCTCTTACCTCGTTGATTCA-TTGGGTTTACC 311
Query 236 TAAAAAGCTCGCAGAGTCGATTTCAATAAAAGTCAGTTTCGAGAACAAGGCCAATCCTGA 295
||||||||||| || ||| | |||| || || || |||||| |||||| ||| |||||
Sbjct 312 CAAAAAGCTCGCTGAATCGGTCTCAAGGAAGGTTAGCTTCGAGGACAAGGACAACCCTGA 371
Query 296 TTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTTACAGATTCTCAGATCTCCAACATCAT 355
|||||||||| ||||||||||||||||||||| || |||||||||||||||| |||| |
Sbjct 372 CTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCCACCATCGT 431
Query 356 TACGGATTATCCACTATTGCTCATAGCAGATGCTGAGAATTCCCTTGGTCCCAAGCTTAA 415
|||||||||||||| |||||| |||| ||||||||||| || |||| |||||||||| |
Sbjct 432 TACGGATTATCCACAATTGCTTGTAGCTGATGCTGAGAAATCACTTGCTCCCAAGCTTCA 491
Query 416 GTTGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCC 475
||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 492 GTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTACAGTTCC 551
Query 476 TAAAATCTTAGCAATGAAAGGGGACAAAAGTATCAGCAG-ATACTATGATATCGTCAAAG 534
||||||||| | || || ||| |||||| ||||||| | || ||||||| || ||||||
Sbjct 552 TAAAATCTTGGGAAAGAGAGGCCACAAAACTATCAGC-GTATTCTATGATTTCATCAAAG 610
Query 535 AGA-TTGTAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTGTGTCATTCTTTGCCAGAG 593
| | || || | ||||||||||||||| |||||||| ||||| |||| ||| ||
Sbjct 611 AAACTT-TACTTG---ATAAGAGTTCCAAGTCCGAAAAGTCATGTCAACCTTTTCCACAG 666
Query 594 GGTAGTAAGCAGGAGAATAAAATCAGAAATGTT-T-TGGTTTTGAGAGAATTGGGCG-TG 650
|||| | | |||||| || ||||||||| || | || |||||||||||||||| | ||
Sbjct 667 GGTAAT---CTGGAGAACAAGATCAGAAAT-TTATCTG-TTTTGAGAGAATTGGG-GATG 720
Query 651 CCTCA-AAGGTTGTTATTCTCCTTGCTCATCTCTAATCACCATGTCTG-CTGT-GGAAAA 707
||||| ||| ||||||||| |||||||||||||| | || | ||| || | || |||
Sbjct 721 CCTCACAAG-TTGTTATTCCCCTTGCTCATCTCTTGTGACG-TACCTGTCT-TCGGTAAA 777
Query 708 GAAAAATTTGAAGAATCACTCGAGAAGGTTGTTGGGATGGGTTTTGATCCCA-CCACCCC 766
||||||||||||||||| ||| |||| ||||||| ||||||||||||||| | ||||| |
Sbjct 778 GAAAAATTTGAAGAATCCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCC-ATCCACCTC 836
Query 767 AAAGTTTGTGGAAGCCTTATGCATTGTTTACGGATTGAGCGACAAAAGGC-TAGAAGA-A 824
||||||||||||||| || ||| ||||| | ||||||||||||||| | ||||||| |
Sbjct 837 AAAGTTTGTGGAAGCTTTGTGCGTTGTTCAAAGATTGAGCGACAAAAA-CATAGAAGATA 895
Query 825 AACTTCAATGTC-TATAAAAGGTTCGGCTT 853
|| | ||||| | ||||||||||| |||||
Sbjct 896 AAGT-CAATG-CGTATAAAAGGTTAGGCTT 923
> AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911205-22912935 FORWARD
LENGTH=1731
Length=1731
Score = 484 bits (262), Expect = 7e-136
Identities = 684/875 (78%), Gaps = 80/875 (9%)
Strand=Plus/Plus
Query 32 TTCTCTGATTCCT-CATGGAAAAAGGTTGGTCCAGTTTCAGAAAGGGCATAACTTT-AGT 89
|||||||||| || ||||||| |||||||||||| | |||||| || | | ||| |||
Sbjct 254 TTCTCTGATT-CTCCATGGAAGAAGGTTGGTCCAATCGCAGAAA-TGCTTGAGTTTGAGT 311
Query 90 GTCTCAGTGAAGCTTTTCCAAAATGTATTCTCTGCTTTT-TCCAATTCCTTCTCATCTGT 148
|| ||||| | ||||||| | | | || |||| |||||||||||||| | |
Sbjct 312 GTTTCAGT---G------CAAAATGCA-T-T-TG-TTTTGTCCAATTCCTTCTC-T-T-C 355
Query 149 TGCTAGTTCT-CATGATGTGAGCATTAGAGATGGTCGAAAAGGTAACAACTTTACAGTCT 207
|||||| || | |||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 356 TGCTAGAGCTGC-TGATGTGAGCATTAGAGATGGTCGAAAAGGGAAGAACTTTACAGTCT 414
Query 208 CTTACCTCATTGATTCACTTGG-TTTAACTAAAAAGCTCGCAGAGTCGATTTCAATAAAA 266
|||||||| |||||||| |||| |||| ||||||||||||| || || || |||| |||
Sbjct 415 CTTACCTCGTTGATTCA-TTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAGGAAA 473
Query 267 GTCAG-TTTCGAGAACAAGGCCAATCCTGATTCTGTTCTGAGTCT-TTTGAGAAGTCATG 324
|| || ||| ||| |||||| |||||||||||||||||| ||||| ||| |||||| | |
Sbjct 474 GTTAGCTTT-GAGGACAAGGTCAATCCTGATTCTGTTCTAAGTCTGTTT-AGAAGTTACG 531
Query 325 GGTTTACAGATTCTCAGATCTCCAACATCATTACGGATTATCCACTATTGCTCATAGCAG 384
|||| ||||||||||||||||| | |||||||||||||||||| ||||||| ||||||
Sbjct 532 GGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCTTGTAGCAG 591
Query 385 ATGCTGAGAATTCCCTTGGTCCCAAGCTTAAG-TTGCTGCAGTCAAGAGGAGCTTCAAGC 443
||||| |||| | ||||||| ||||||| || || |||||||| |||||||||||||||
Sbjct 592 ATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATT-CTGCAGTCTAGAGGAGCTTCAAGC 650
Query 444 TCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTTAGCAATGAAAGGGGACAAA 503
|||||| |||||||||||||||||| ||| || | |||||||| ||||| | ||
Sbjct 651 TCTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAG----GAAAG---A-AAT 702
Query 504 AGTATCAGCAG-ATACTATGATA-TCGTCAAAGAGATTGTAGAAGCGGATAAGAGTTCCA 561
||| | | | |||||||||| | |||||||| ||| ||| ||| |||| |||||| |
Sbjct 703 C-TATTA-CTGTATACTATGATGCT-GTCAAAGACATTATAGTAGCCGATACGAGTTCGA 759
Query 562 AGTTCGAAAAGTTGTGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATCAGAA 621
||| | | | | | | ||| ||||| | || || |||||||||| |||
Sbjct 760 -GTT--A----T-GAA-C-T-C----CCACAGGGTTCTCAG--GG-GAATAAAATCCGAA 801
Query 622 ATGTTTTGGTTTTGAGAGAATTGGGCGTGCCT-CAAAGGTTGTTATT-CTCCTTGCTCAT 679
|||| | || |||||||||||| ||| ||||| | |||||||||| | |||||||| |
Sbjct 802 ATGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GGTTGTTATTAC-CCTTGCTCGT 859
Query 680 CTCTAA-TCACCATGTCTGC-TGTGGAAAAGAAAAATTTGAAGAATCACTCGAGAAGGTT 737
||| || || | | | ||| |||||||||||||| ||||| | ||| || ||||||||
Sbjct 860 CTCCAAATCGC-A-GCCTGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAAGAAGGTT 917
Query 738 GTTGGGATGGGTTTTGATCCCACCACCCC-AAAGTTTGTGGAAGCCTTATGC--ATTG-T 793
|||| |||||| ||||||||||||||| | ||| ||||| ||| || ||| || | |
Sbjct 918 GTTGAGATGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGC-TT-TGCGGAT-GCT 973
Query 794 TTACGGATTGAGCGACAAAAGGCTAGAAGAAAAC-TTCAATGTCTATAAAAGGTTCGGCT 852
|||| | ||||||| |||| | | |||||||| || | |||| || ||| || || |
Sbjct 974 TTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGTA-GTCTTTAGAAGTTTAGGTT 1032
Query 853 TAACTGTAAACGATATATGGGAACTTTTCAAGAAG 887
| ||||| | ||| |||||||| |||||||||||
Sbjct 1033 TTACTGTGGATGATGTATGGGAAATTTTCAAGAAG 1067
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 390 bits (211), Expect = 2e-107
Identities = 494/625 (79%), Gaps = 42/625 (7%)
Strand=Plus/Plus
Query 280 ACAAGGCCAATCCTGATTCTGTTCT-GAGTCTTTTGAGAAGTCATGGGTTTACAGATTCT 338
|||||| ||| ||||||| ||||| || |||| | |||||| ||||||| || ||||||
Sbjct 338 ACAAGGGAAATTCTGATTCCGTTCTGGA-TCTTCTCAGAAGTTATGGGTTCACTGATTCT 396
Query 339 CAGATCTCCAACATCATTACGGA-TTATCCACTATTGCTCATAG-CAGATGCTGAGA-AT 395
|||||||||| |||||| | ||| | || || | |||| |||| || ||| || || |
Sbjct 397 CAGATCTCCAGCATCATCA-GGAGTGATTCAAGAGTGCTTATAGACA-ATGATGCGACA- 453
Query 396 TCCCTTGGTCCCAAGCTTAAGTTGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACT 455
||||||||| | |||||| |||| ||||||| |||||||||||||||||||||||||||
Sbjct 454 TCCCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACT 513
Query 456 GAGATTGTTTCTAAAGTTCCTAAAATCTTAGC-AATGAAAG-GGGACAAAAGTATCAGCA 513
||| ||||||| | ||||||||||||||| | || || || ||| |||| | ||||||
Sbjct 514 GAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAA-GAGAGAGGG-CAAATCTCTCAGCA 571
Query 514 GATACTATGATATCGTCAAAGAGATTGTAGAAGCGGATAAGAGTTCCAAGT-TCGAAAAG 572
|||| |||||| || |||||| ||| ||||||| |||||||||||||||| | ||||||
Sbjct 572 GATATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGTTCCAAGTAT-GAAAAG 630
Query 573 TTGTGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAATAAAATCAGAAATGTTTTGGTT 632
| | |||||||||| || |||||| | || ||| | ||||||| | ||||||
Sbjct 631 ATATCTCATTCTTTGGCACAGGGTA--A--CA--AGA-T-----CAGAAATATCTTGGTT 678
Query 633 TTGAGAGAATTGGGCGTGCCTCAAAGGTTGTTATT-CTCCTTGCTCATCTCTAA-TCACC 690
||||||||| | ||||||||||||| | |||| | || ||||||||||| || || |
Sbjct 679 TTGAGAGAACTAGGCGTGCCTCAAAAGCGGTTACTGCTT-TTGCTCATCTCCAAATCGC- 736
Query 691 ATGTCTGCT-GTGGAAAAGAAAAATTTGAAGAATCACTCGAGAAGGTTGTTGGGATGGGT 749
| | ||| | ||||||||||||| ||||| | ||||||| ||||||| |||| |||||||
Sbjct 737 A-GCCTGTTTGTGGAAAAGAAAAGTTTGATGCATCACTCAAGAAGGTAGTTGAGATGGGT 795
Query 750 TTTGATCCCACCACCCCAAAGTTTGTGGAAGCCTTATGCAT-TG-TTTACGGATTGAGCG 807
|||||||| |||||| ||| ||||||| | || || ||||| || ||||| | ||||||
Sbjct 796 TTTGATCCAACCACCTCAACGTTTGTGCACGC-TT-TGCATATGCTTTACCAAATGAGCG 853
Query 808 ACAAAAGGCTAGAAGAAAACTTCA-ATGTCTATAAAAG-GTTCGGCTTAACTGTAAACGA 865
|||||| | | |||||||| || | ||||||| ||| || || || |||| | ||
Sbjct 854 ACAAAACGATTGAAGAAAAAATCCGA-GTCTATAGAAGTGTA-GGTTTCTCTGTTGATGA 911
Query 866 TATATGGG-AACTTTTCAAGAAGTG 889
| |||||| || | |||||||||||
Sbjct 912 TGTATGGGCAA-TGTTCAAGAAGTG 935
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 357 bits (193), Expect = 2e-97
Identities = 283/324 (87%), Gaps = 15/324 (5%)
Strand=Plus/Plus
Query 32 TTCTCTGATTCCT-CATGGAAAAAGGT-TGGTCCAGTTTCAGAAAGGGCATAACTTTAGT 89
|||||||| | || ||||||| ||| | | || |||| || ||| ||| ||||||||||
Sbjct 126 TTCTCTGA-TACTCCATGGAAGAAGATCT-ATCGAGTTACATAAATGGCGTAACTTTAGT 183
Query 90 GTCTCAGTGAAGCTTTTCCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCT-CATCTGT 148
|| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||
Sbjct 184 GTTTCAGTGAAGCTTTTGCAAAATGTATTCTCTGCTTTTTCCAATTCCTTCTCCA-CTGT 242
Query 149 TGCTAGT--T-CT-CATGATGTGAGCATTAGAGATGGTCGAAAAGGTAACAACTTTACAG 204
||||||| | || | |||||||||| ||| |||| ||| ||||||||| ||||||||||
Sbjct 243 TGCTAGTGCTGCTGC-TGATGTGAGCCTTATAGATAGTCAAAAAGGTAAGAACTTTACAG 301
Query 205 TCTCTTACCTCATTGATTCACTT-GGTTTAACTAAAAAGCTCGCAGAGTCGATTTCAATA 263
||||||||||| |||||||| || |||||| ||||||||||||| || |||||||||| |
Sbjct 302 TCTCTTACCTCGTTGATTCA-TTGGGTTTACCTAAAAAGCTCGCTGAATCGATTTCAA-A 359
Query 264 -AAAGTCAGTTTCGAGAACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCA 322
||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GAAATTTAGATTCGAGGACAAGGCCAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCA 419
Query 323 TGGGTTTACAGATTCTCAGATCTC 346
|||||| |||| ||||||||||||
Sbjct 420 TGGGTTCACAGTTTCTCAGATCTC 443
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 281 bits (152), Expect = 1e-74
Identities = 313/388 (81%), Gaps = 21/388 (5%)
Strand=Plus/Plus
Query 1017 GAGCAGCAGATATTGAATTCCATGGAAACATTTATTGGCTTAGGATTTAGCAGAGATGAG 1076
||| || |||| ||| | ||||| ||||||||| ||||| ||||||| ||||||||||||
Sbjct 1092 GAGAAGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCAGCAGAGATGAG 1151
Query 1077 TTTGTGATGATGGTCAAGCGCTTTCCTCAGTGCATTGGA-TATTCTGCAGAGATGGTGAA 1135
|||| | ||||||||||| |||||||| |||||||||| || ||| |||||| ||| ||
Sbjct 1152 TTTGCCAAGATGGTCAAGCACTTTCCTCCGTGCATTGGATTA-TCTACAGAGACGGTCAA 1210
Query 1136 GAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTAAAGG-TCATAACTTTGT 1194
||||| ||||||||| |||||||||||||||||||||||||||||| | | |||
Sbjct 1211 AAAGAAAACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTTG--TTTCA 1268
Query 1195 T-CCCT-CAGGTACTTGGATACAGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAAT 1252
|||| | |||| ||||||| ||| |||||||||||||||| |||||| ||||||||||
Sbjct 1269 AACCCTGC-GGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGGGGTAACGTAAT 1327
Query 1253 CAAAGCTCTTATGTCCAAAGGATCGCTTG-GAAGCGAACTCCCTCCAATGCCGTCTGTCT 1311
||||||||| ||||||||||||| | | | ||| ||||||||| | || ||| ||||
Sbjct 1328 CAAAGCTCTCATGTCCAAAGGATTGAT-GAGAAATGAACTCCCTTCGATATCGTGTGTCC 1386
Query 1312 TGGCATGT--ACCGATCAGACCTTCTTAAACAGGTATGTGGTGGAGCATGATG-A-AA-- 1365
| ||||| ||| | ||| || |||||||||||||||| | | || | || | ||
Sbjct 1387 T--CATGTGTACCAAGCAGGTGTTTTTAAACAGGTATGTGGCGAATCACG-TGGACAAGC 1443
Query 1366 AGCTGGTG-CTTCAGTTGATGGCTATCT 1392
|||||||| | |||||||||||||||
Sbjct 1444 AGCTGGTGACGG-AGTTGATGGCTATCT 1470
> AT1G62055.1 | Symbols: | pseudogene, hypothetical protein |
chr1:22940331-22940864 REVERSE LENGTH=534
Length=534
Score = 252 bits (136), Expect = 8e-66
Identities = 265/324 (82%), Gaps = 22/324 (7%)
Strand=Plus/Plus
Query 176 AGATGGTCGAAAAGGTAACA-ACTTT-AC-AGTCTCTTACCTCATTGATTCACTT-GGTT 231
|||||||||||||||| || | ||| || | |||||||||||||||||||| || || |
Sbjct 183 AGATGGTCGAAAAGGT--CAGATTTTCACTA-TCTCTTACCTCATTGATTCA-TTGGGAT 238
Query 232 TAA-CTAAAAAGCTCGCAGAGTCGATTTCAATAAAAGTCAGTTTCGA-GAACAAGG-CCA 288
||| | ||||| ||||| || || || || | ||||| || |||| | | ||| |
Sbjct 239 TAACCGAAAAA-CTCGCTGAATCCATCTCGAGGAAAGTAAGCGTCGATG-A-GAGGAGAA 295
Query 289 ATCCTGATTCTGTTCTGAGTCTT-TTGAGAAGTCATGGGTTT-ACAGATTCTCAGATCTC 346
|||||||||||||||||| |||| || |||||| || ||||| ||||||||||||||||
Sbjct 296 ATCCTGATTCTGTTCTGAATCTTCTT-AGAAGTTAT-GGTTTCACAGATTCTCAGATCT- 352
Query 347 CAA-CATCATTACGGATTATCCACTATTGCTCATAGCAGATGCTGAGAATTCCCTTGGTC 405
||| |||||||| ||||||| | ||||| |||| ||||||| |||| || |||| ||
Sbjct 353 CAAGTATCATTACAAATTATCCTCGGTTGCTTATAGTAGATGCTAAGAAATCACTTGCTC 412
Query 406 CCAAGCTT-AAGTTGCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTT 464
|||||||| | ||| ||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 413 CCAAGCTTCAGGTT-TTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGACTGTT 471
Query 465 TCTAAAGTTCCTAAAATCTTAGCA 488
|||| |||||||||||||| |||
Sbjct 472 TCTACCGTTCCTAAAATCTTGGCA 495
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70732567905
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5