BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924788 Length=1481 Score E Sequences producing significant alignments: (Bits) Value AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 745 0.0 AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 743 0.0 AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 704 0.0 AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 580 9e-165 AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | ch... 505 6e-142 > AT1G62085.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22948757-22950142 REVERSE LENGTH=1386 Length=1386 Score = 745 bits (403), Expect = 0.0 Identities = 818/1012 (81%), Gaps = 54/1012 (5%) Strand=Plus/Plus Query 146 TGGTC-AAAAAGG-TCAGATTTTCACTATCTCTTACCTCATTGATTCATTGGGTTTAACC 203 ||||| |||| || | || |||| || ||||||||||| |||||||||||||||| ||| Sbjct 147 TGGTCGAAAAGGGTTGAG-TTTT-TCTGTCTCTTACCTCGTTGATTCATTGGGTTT-ACC 203 Query 204 -GCAAACCTCGCTGAATCGATCTC-AAGAAAAGTAAGCTTCGAGGA-GAGGAGAAATCCT 260 ||| |||| ||||||||||| ||| ||||| ||||||||||| | | | |||||| Sbjct 204 TAAAAAGGTCGCAGAATCGATCTCAAAG-AAAGTCAGCTTCGAGGACAAAG-GCAATCCT 261 Query 261 GACTCTGTTCTGAATCTTTTTAGAAGTTACGGATTCACAGATTCTCAGATCGCAAGCATC 320 || |||||||||| ||| || |||||| | || ||||| |||||||||||| |||||||| Sbjct 262 GATTCTGTTCTGAGTCTATTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCAAGCATC 321 Query 321 ATTACTGATTATCCACGATTGCTTA-TAG-TAGATGCTAAGAAATCTCTTGGTCACAAGC 378 ||||| |||||||||| ||||| || ||| | |||||| ||||||| |||||| ||||| Sbjct 322 ATTACGGATTATCCACAATTGC-TAGTAGCT-GATGCTGAGAAATCAATTGGTCCCAAGC 379 Query 379 TTCAAGTTT-TGCAGTCTAGAGGAGTTTCAAGCTCTGAGCTCACTGAGACTGTTTCTAAA 437 ||| ||||| ||||||| ||||||| |||||| |||||||||||| | | ||| |||| | Sbjct 380 TTC-AGTTTCTGCAGTCCAGAGGAGCTTCAAGGTCTGAGCTCACTCATATTGTATCTACA 438 Query 438 GTTCCTAAAATCTT-GGCAATGAAAGGGGACAAAACTATAAGCAGATACTATGATTTCGT 496 |||||| ||||||| || || || ||||||||||||||| |||| |||||||||||| || Sbjct 439 GTTCCTGAAATCTTGGGGAA-GAGAGGGGACAAAACTATCAGCATATACTATGATTTTGT 497 Query 497 CAGAGAGATTATCGAAGCGGGTAAGAGTTCTAAGTTCGAAAAGTTATGTCAATCTATGCC 556 | ||||||||| ||||||| ||||||||| |||||||||||||||||||| ||| |||| Sbjct 498 TAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTATGTCATTCTTTGCC 557 Query 557 ACAGGGTA-T--GCAAGAGAATAAAATCCGAAAT-TTATCT-GTTTTGAGAGAACTT-GG 610 | |||||| | ||| ||||| |||||| ||||| || | | |||||||||||| || || Sbjct 558 AGAGGGTAGTAAGCAGGAGAACAAAATCAGAAATGTT-T-TGGTTTTGAGAGAA-TTGGG 614 Query 611 CGTGCCTCAGAGGTTATTATTCCCTTTGCTCGTCTCTGATCGTAAACTTGTATGTGGAAA 670 || ||||| ||||| || ||||| ||||| | ||||||| ||| ||| |||||||| Sbjct 615 TGTTCCTCAAAGGTTGTTGTTCCCATTGCTTATATCTGATCACCAACCTGTCTGTGGAAA 674 Query 671 AGAAAAATTTGAAGAATCTCTTAAGAAGGTTGTTGAGATGGGTTTTGAACCGACAACCTC 730 |||||| ||||||||||| || ||||| |||||||||||||||||||| || || ||||| Sbjct 675 AGAAAATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCAACCACCTC 734 Query 731 AAAGTTTGTCAACGCTC-TACGTGTTGTTCAAAGAATCAGCGAGAAAGA-AATAGAAG-A 787 |||||||||||| |||| || | |||||| | ||| || |||| ||| | ||||||| | Sbjct 735 AAAGTTTGTCAAAGCTCTTA-GGGTTGTTTACAGATTCCGCGACAAA-ACTATAGAAGCA 792 Query 788 AAAGGTCAGTTTCTATAAAAGGTTAGGCTTTGATGTGGGAGATGTATCTGAAATGTTCAA 847 ||| || | | ||| |||||| ||||||||| ||| |||||||||| | |||||| || Sbjct 793 AAA-GTTAATGTCTGTAAAAGTTTAGGCTTTTCTGTTGGAGATGTATGGGCAATGTTTAA 851 Query 848 GAAGTATCCAGT-CTCTATGAGA-TTATCCGAAAAGAAGATAACTCAGAAGTT-TGAAAC 904 ||||| ||| | || | ||| | || || || || |||||| ||| || || ||||| Sbjct 852 GAAGTGTCC-TTCCTTTCTGA-ATTTCTCTGAGAACAAGATAGTTCA-AACTTGGGAAAC 908 Query 905 CTTGAAGAAGTGTGGACTACTCGAAGACGA-GATCCTCTCAGTGTT-------T--CCGC 954 | |||||||||||||||||||||||||||| | ||||||||||||| | || | Sbjct 909 CCTGAAGAAGTGTGGACTACTCGAAGACGATG-TCCTCTCAGTGTTGAAGAAGTTTCCAC 967 Query 955 AATGCATTGGTGCTTCGGAGCAGAAGATAGCAAAATCCATTGAAACATTTAAAGACCTCG 1014 |||||||| |||||| |||||||||||| || ||||||||||||||| || | | | Sbjct 968 AATGCATTAATGCTTCAGAGCAGAAGATAATGAACTCCATTGAAACATTTCTAGGCTTAG 1027 Query 1015 GATTCAGCAAAAATGAGTTTGCGTTTATGGTCAAGCACTTTCCT-ATGTGTCTTAACATA 1073 |||| |||| | ||||| |||| | || | ||||| ||||||| | || |||| || Sbjct 1028 GATTTAGCAGAGATGAGGTTGCAATGATAGCCAAGCGCTTTCCTCAA-TGCCTTATTTTA 1086 Query 1074 TCCGCagagacggtgaagaagaagac-gaagtttctggtgaagaagaagaat 1124 || |||||||| |||||||| ||||| || ||||||||||||||||| |||| Sbjct 1087 TCTGCAGAGACAGTGAAGAAAAAGACTGA-GTTTCTGGTGAAGAAGATGAAT 1137 > AT1G62110.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22957876-22959711 REVERSE LENGTH=1836 Length=1836 Score = 743 bits (402), Expect = 0.0 Identities = 831/1029 (81%), Gaps = 66/1029 (6%) Strand=Plus/Plus Query 136 GAGCT-AA-AGATGGTCAAAAAGGT-CAG-ATTTTCACTATCTCTTACCTCATTGATTCA 191 ||||| || |||||||| |||| || || | ||| ||| ||||||||||| |||||||| Sbjct 355 GAGCTCAAGAGATGGTCGAAAA-GTGAAGAACTTT-ACTGTCTCTTACCTCGTTGATTCA 412 Query 192 TTGGGTTTAACCGCAAACCTCGCTGAATCGATCTC-AAGAAAAGTAAGCTTCGAGGA-GA 249 ||||||||| | |||| ||||||||||| ||||| ||| ||||| || |||| | | | Sbjct 413 TTGGGTTTAGCTACAAAACTCGCTGAATCAATCTCAAAG-AAAGTCAGTTTCGTGAACAA 471 Query 250 GGAGAAATCCTGACTCT-GTTCTGAATCTTTTTAGAAGTTACGGATTCACAGATTCTCAG 308 || | |||||||| | | ||||||| ||||||||||||||| || |||||| |||||||| Sbjct 472 GG-GCAATCCTGA-TTTAGTTCTGAGTCTTTTTAGAAGTTATGGGTTCACAAATTCTCAG 529 Query 309 ATCGCAAGCATCATTACTGATTATCC-ACGATTGCTTATAGTAGATGCTAAGAAATCTCT 367 ||| | ||||||||||| |||||||| | |||||||| || |||||||| ||||||| || Sbjct 530 ATCTCCAGCATCATTACGGATTATCCTA-GATTGCTTCTAATAGATGCTGAGAAATCACT 588 Query 368 TGGTCA-CAAGCTTCAAG-TTTTGCAGTCTAGAGGAGTTTCAAGCTCTGAGCTCACTGAG 425 || | | |||||||| || ||||| |||||||||||| ||||||| ||||||||||| || Sbjct 589 TGAT-ATCAAGCTTC-AGTTTTTGGAGTCTAGAGGAGCTTCAAGCCCTGAGCTCACTCAG 646 Query 426 ACTGTTTCTAAAGTTCCTAAAATCTTGGCAATGAAAG-GGGACAAAACTATAAGCAGATA 484 | |||||||| |||||||||||| |||| |||||||| |||| || || || ||||||| Sbjct 647 ATTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGGA-AAGTCTCTAGGCAGATA 705 Query 485 CTATGATTTCGTCAGAGAGATTATCGAAGCGGGTAAGAGTTCTAAGTTCGAAAAGTTATG 544 |||||||||||||| ||||||||| ||||| | ||||||||| |||| ||||| || || Sbjct 706 CTATGATTTCGTCAAAGAGATTATAGAAGCAGATAAGAGTTCCAAGTACGAAACTTTGTG 765 Query 545 TCAATCTATGCCACAGGGT-AT--GCAAGAG-AATAAAATCCGAAAT-TTATCTGTT-TT 598 |||| || ||||| ||| | || || || | ||||||||| ||||| || || ||| || Sbjct 766 TCAACCTTTGCCAGAGGCTAATAGGC-AGGGTAATAAAATCAGAAATGTT-TCGGTTCTT 823 Query 599 GAGAGAACTT-GGCGTGCCTCAGAGGTTATTATTC-CCTTTGCTCGTCTCTGATCG-TAA 655 |||| |||| || |||||||||| ||| |||||| || |||||| |||||||| | | Sbjct 824 -AGAG-ACTTGGGTGTGCCTCAGAAGTTGTTATTCTCC-TTGCTCATCTCTGAT-GCCCA 879 Query 656 ACTTGTATGTGGAAAAGAAAAATTTGAAGAATCTCTTAAGAAGGTTGTTGAGATGGGTTT 715 || ||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||| Sbjct 880 ACCTGTTTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAGGTTGTTGAGATGGGTTT 939 Query 716 TGAACCGACAACCTCAAAGTTTGT-CAACGCTC-TACGTGTTGTTCAAAGAATCAGCGAG 773 ||| || || |||||||||||||| ||| |||| || | | |||| | ||| ||| ||| Sbjct 940 TGATCCAACCACCTCAAAGTTTGTCCAA-GCTCTTA-GGGCTGTTTACAGATTCACCGAC 997 Query 774 AAAGA-AATAGAAGAAAAG-GTCAGTTTCTATAAAAGGTTAGGCTTTGATGTGGGAGATG 831 ||| | |||||||| |||| || | | | |||||| |||| ||||||| ||||| ||||| Sbjct 998 AAA-ACAATAGAAG-AAAGAGTTAATGTGTATAAAGGGTTCGGCTTTGCTGTGGAAGATG 1055 Query 832 TATCTGAAATGTTCAAGAAGTATCCAGT-CTCTATG-AGATTATCCGAAAAGAAGATAAC 889 ||| | |||||||||||| | ||| | || | || | | | || || |||||||| Sbjct 1056 TATGGGCAATGTTCAAGAAATGTCC-TTACTTTTTGAATAGT-TCGGAGAAGAAGATTGG 1113 Query 890 TCAGA-AGTTTGAAACCTTGAAGAAGTGTGGACTACTCGAAGACGAGATCCTCTCAGTGT 948 ||||| | |||||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct 1114 TCAGACA-ATTGAAACCCTGAAGAAGTGTGGACTACTCGAAGACGAGGTCATCTCAGTGT 1172 Query 949 T-------T--CCGCAATGCATTGGTGCTTCGGAGCAGAAGATAGCAAAATCCATTGAAA 999 | | ||||| ||||||||| |||| |||||||||||| || |||||||||| Sbjct 1173 TGAAAAAGTATCCGCAGTGCATTGGTACTTCAGAGCAGAAGATATTGAACTCCATTGAAA 1232 Query 1000 CATTTAAAGACCTCGGATTCAGCAAAAATGAGTTTGCGTTT-A-TGGTCAAGCACTTTCC 1057 |||| || ||| || ||||||| | ||||||| | | | |||| |||| |||||| Sbjct 1233 TATTTCTAGGCCTAGGCTTCAGCAGAGATGAGTT--CATAACAATGGTTAAGCGCTTTCC 1290 Query 1058 T-ATGTGTCTTAACATATCCGCagagacggtgaagaagaagac-gaagtttctggtgaag 1115 | | |||||||| |||| |||||||||||||||||||||| || |||| |||||||| Sbjct 1291 TCA-GTGTCTTATTTTATCTGCAGAGACGGTGAAGAAGAAGATTGA-GTTTGTGGTGAAG 1348 Query 1116 aagaagaat 1124 |||| |||| Sbjct 1349 AAGATGAAT 1357 > AT1G61960.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22902150-22903837 FORWARD LENGTH=1688 Length=1688 Score = 704 bits (381), Expect = 0.0 Identities = 794/986 (81%), Gaps = 57/986 (6%) Strand=Plus/Plus Query 172 TCTCTTACCTCA-TTGATTCATTGGGTTTAACCGCAAACCTCGCTGAATCGATCT-CAAG 229 |||||||||| | |||||||||||||||||||| |||| ||||| |||||||||| |||| Sbjct 253 TCTCTTACCT-AGTTGATTCATTGGGTTTAACCACAAAGCTCGCAGAATCGATCTCCAAG 311 Query 230 AAAAGTAAGCTTCGAGGAGAGGAGAAATCCTGACTCTGTTCTGAATCTTTTTAGAAGTTA 289 ||||||||||||||||||||||||||||| || |||||||||| |||| ||| |||||| Sbjct 312 -AAAGTAAGCTTCGAGGAGAGGAGAAATCCGGATTCTGTTCTGAGTCTTCTTACAAGTTA 370 Query 290 CGGATTCACAGATTCTCAGATCGCAAGCATCATTACTGAT-TATCCACGATTGCTTATAG 348 || |||||| | |||||||| |||| ||||||||| || || |||||||||||| | Sbjct 371 TGGGTTCACAAAGTCTCAGATTTCAAGTATCATTACT-ATCTACCCACGATTGCTTGCAT 429 Query 349 TAGATGCTAAGAAATCTC-TTGGTCACAAGCTTCAAGTTT-TGCAGTCTAGAGGAGTTTC 406 |||||||| ||||||| | ||| || ||||||||| || | ||||||| ||||||| ||| Sbjct 430 TAGATGCTGAGAAATC-CATTGCTCCCAAGCTTCA-GTCTCTGCAGTCCAGAGGAGCTTC 487 Query 407 AAGCTCTGAGCTCACTGAGACTGTTTCTAAAGTTCCTAAAATCTTGGC-AATGAAAGGGG 465 |||||||||||||||| ||| |||||||| |||||||||||||||| || || |||| Sbjct 488 AAGCTCTGAGCTCACTCAGATTGTTTCTACTGTTCCTAAAATCTTGGGGAA-GAGAGGGC 546 Query 466 ACAAAACTATAAGCAG-ATACTATGATTTCGTCAGAGAGATTATCGAAGCGGGTAAGAGT 524 ||||| |||||| | | ||||||||||||||||| ||| ||||| ||||| | ||||||| Sbjct 547 ACAAATCTATAA-CTGTATACTATGATTTCGTCAAAGACATTATAGAAGCTGATAAGAGT 605 Query 525 TCTAAGTT-CGAAAAGTTATGTCAATCTATGCCACAGGGTATGCAAGA-GAATAAAATCC 582 |||| ||| ||||||||||||||| ||| | |||||||||| ||||| |||||| ||| Sbjct 606 TCTA-GTTACGAAAAGTTATGTCATTCTTTTCCACAGGGTAA-CAAGAAGAATAAGATCA 663 Query 583 GAAATTTATCTGTTTTGAGAGAACTTGGC-GTGCCTCAGAGGTTATTATTCCCTTTGCTC 641 ||||| | ||||||||||||||| |||| ||| ||||| | || ||||||||||||||| Sbjct 664 GAAATATCTCTGTTTTGAGAGAA-TTGGGTGTGGCTCAGCGTTTGTTATTCCCTTTGCTC 722 Query 642 GTCTCTGATCGTAAACTTGTATGTGGAAAAGAAAAATTTGAAGAATCTCTTAAGAAGGTT 701 |||| ||| | ||| ||| ||||| ||||||| ||||||||||||||| ||||||||| Sbjct 723 ATCTCAGATGGCCAACCTGTCTGTGGTAAAGAAAGATTTGAAGAATCTCTCAAGAAGGTT 782 Query 702 GTTGAGATGGGTTTTGAACCG-ACAACCT-CAAAGTTTGTC-AACGCTCTACGTGTTGTT 758 ||||||||||||||||| ||| | | | | ||||||| || || ||||| || ||| || Sbjct 783 GTTGAGATGGGTTTTGATCCGGAGA-C-TACAAAGTTCGTTGAA-GCTCTGCGAGTTATT 839 Query 759 CAAAGAATCAGCGAGAAAGA-AATAGAAGAAAAGGTCAGTTTCTATAAAAGGTTAGGCTT 817 | | || || || ||| | |||||||||||| |||| | |||| |||||||||||||| Sbjct 840 TACCGTATGAGTGACAAA-ACAATAGAAGAAAAAGTCAATGTCTACAAAAGGTTAGGCTT 898 Query 818 TGATGTGGGAGATGTATCTGAAATGTTCAAGAAGTATCCAGTCTCTAT-GAGATTA-TCC 875 || ||||| ||||||| | ||| |||||||||| || ||| | | | || | || Sbjct 899 TGGTGTGGCTGATGTATGGGCAATCTTCAAGAAGTGGCCT-TCTTTTTTGTCAT-ACTCA 956 Query 876 GAAAAGAAGATAACTCAGAAGTTTGAAACC-TTGAAGAAGT-GTGGACTACTCGAAGACG 933 || |||||||||||||| | ||||||||| || |||| || |||| || || || ||| Sbjct 957 GAGAAGAAGATAACTCATACTTTTGAAACCCTT-AAGA-GTTGTGGTCTGCTTAAACACG 1014 Query 934 AGATCCTCTCAGTGTT---------TCCGCAATGCATTGGTGCTTCGGAGCAGAAGATAG 984 || |||| | | |||| ||| |||||||| || |||| ||||||||||| | Sbjct 1015 AGGTCCTGTTATTGTTGAAGAAGCATCCAAAATGCATTTGTTCTTCAGAGCAGAAGATTG 1074 Query 985 CAAAATCCATTGAAACATT-TAAAGACCTCGGATTCAGCAAAAATGAGTTTGCGTTTATG 1043 || ||||| |||||||| | | | ||| |||||||||| | ||||||||||| | ||| Sbjct 1075 TGAACTCCATAGAAACATTCTTAGG-CCTAGGATTCAGCAGAGATGAGTTTGCGATGATG 1133 Query 1044 GTCAAGC-ACTTTCCT-ATGTGTC-TTAACATATCC-GCagagacggtgaagaagaagac 1099 ||||||| | | |||| | ||| | || || ||| | || ||||| ||||||||||| || Sbjct 1134 GTCAAGCGA-TATCCTCA-GTG-CATTGAC-TATACTGCTGAGACAGTGAAGAAGAAAAC 1189 Query 1100 -gaagtttctggtgaagaagaagaat 1124 || |||| | |||||||| | |||| Sbjct 1190 TGA-GTTTATTGTGAAGAATATGAAT 1214 > AT1G61970.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr1:22904486-22907630 FORWARD LENGTH=2848 Length=2848 Score = 580 bits (314), Expect = 9e-165 Identities = 595/728 (82%), Gaps = 29/728 (4%) Strand=Plus/Plus Query 172 TCTCTTACCTCATTGATTCATTGGGTTTAACCGCAAACCTCGCTGAATCGATCTCAAGAA 231 |||||||||| ||||||||||||| |||||| |||| ||||||||||| || ||| | | Sbjct 391 TCTCTTACCTTGTTGATTCATTGGGCTTAACCACAAAACTCGCTGAATCCATTTCACGGA 450 Query 232 AAGTAAGCTTCGAGGAGAGGAGA-AATCCTGACTCTGTTCTGAATCTTTTTAGAAGTTAC 290 | || ||||||||||| | || | |||||||| ||||||||||||||||| | |||| | Sbjct 451 AGGTTAGCTTCGAGGACAAGA-ACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCAT 509 Query 291 GGATTCACAGATTCTCAGATCGCAAGCATCATTACTGATTATCCACGA-TTGCTTATAGT 349 || ||||||| |||||||||| | | |||||||| ||||| |||| | |||||||||| Sbjct 510 GGGTTCACAGGTTCTCAGATCTCCACCATCATTAGGGATTACCCAC-AGTTGCTTATAGC 568 Query 350 AGATGCTAAGAAATCTCTTGGTCACAAGCTTCAAG-TTTTGCAGTCTAGAGGAGTTTCAA 408 ||||||| ||||||| ||||||| |||||||| || |||||||||||||||||| ||||| Sbjct 569 AGATGCTGAGAAATCACTTGGTCCCAAGCTTC-AGTTTTTGCAGTCTAGAGGAGCTTCAA 627 Query 409 GCTCTGAGCTCACTGAGACTGTTTCTAAAGTTCCTAAAATCTTGGCAATGAAAGGGGACA 468 ||||||| ||||||||| ||||||| |||||| |||| |||| || ||||||| ||| Sbjct 628 GCTCTGAAATCACTGAGATTGTTTCTTCAGTTCCGGAAATATTGGGAAAGAAAGGGCACA 687 Query 469 AAACTATAAGCAG-ATACTATGATTTCGTCAGAGAGA-TTATCGAAGCGGGTAAGAGTTC 526 ||||||| ||| | ||||||||||||| ||| ||| | || | | | | |||||||| Sbjct 688 AAACTATCAGC-GTATACTATGATTTCATCAAAGACACTT-T-G-CTTGAG-AAGAGTTC 742 Query 527 TAAGTTCGAAAAGTTATGTCAATCTATGCCACAGGGT-ATGCAAGAGAATAAAATCCGAA 585 ||| ||||||||||||||| ||| ||||||||||| || | ||||| || ||| ||| Sbjct 743 CAAGAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAAT-CTGGAGAACAAGATCAGAA 801 Query 586 ATTTATCTGTTTTGAGAGAACTT-GGCGTGCCTCAGAGGTTATTATTC-CCTTTGCTCGT 643 || |||| ||||| |||||| || || ||||||| | ||| |||||| || |||||| | Sbjct 802 ATGTATCGGTTTTAAGAGAA-TTGGGAATGCCTCACAAGTTGTTATTCTCC-TTGCTCAT 859 Query 644 CTCTGATCGTAAACTTGTATGTGGAAAAGAAAAATTTGAAGAATCTCTTAAGAAGGTTGT 703 ||| ||| | ||| |||||||||||||||||||||||||||| | || ||||| ||||| Sbjct 860 CTCCGATAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAGTTGT 919 Query 704 TGAGATGGGTTTTGAACCGACAACCTCAAAGTTTGTC-AACGCTCTACGTGTTGTTCA-A 761 ||||||||||||||| || || ||||||||||||||| || ||||||| ||| || | | Sbjct 920 TGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAA-GCTCTACAAGTTATTTACA 978 Query 762 AGAATCAGCGAGAAAGA-AATAGAAGAAAAGGTC-AGTTTCTATAAAAGGTTAGGCTTTG 819 | ||| | ||||||| | ||| |||||||| ||| | | |||||||||| |||||||||| Sbjct 979 A-AATGAACGAGAAA-ACAATCGAAGAAAAAGTCCA-TCTCTATAAAAGCTTAGGCTTTG 1035 Query 820 ATGTGGGAGATGTATC-TGAAATGTTCAAGAAGTATCCAGTCTCTATGAGATTATCCGAA 878 ||||||||||||||| | || | || || |||| ||| |||| ||||| |||| || Sbjct 1036 ATGTGGGAGATGTATGGTCAAGTTTTAAA-AAGTGGCCAATCTCGCTGAGAGTATCGGAG 1094 Query 879 AAGAAGAT 886 |||||||| Sbjct 1095 AAGAAGAT 1102 > AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | chr1:22940331-22940864 REVERSE LENGTH=534 Length=534 Score = 505 bits (273), Expect = 6e-142 Identities = 337/369 (91%), Gaps = 0/369 (0%) Strand=Plus/Plus Query 87 GTCTCACCGCAAAACCCATTTTCTTTTTCCAGTTCCTTCTCTTCTACTAGAGCTAAAGAT 146 |||||| |||||| |||||| ||||||||| |||||||||||||||||| ||||||||| Sbjct 127 GTCTCAGTGCAAAATCCATTTGCTTTTTCCAATTCCTTCTCTTCTACTAGTGCTAAAGAT 186 Query 147 GGTCAAAAAGGTCAGATTTTCACTATCTCTTACCTCATTGATTCATTGGGTTTAACCGCA 206 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 187 GGTCGAAAAGGTCAGATTTTCACTATCTCTTACCTCATTGATTCATTGGGATTAACCGAA 246 Query 207 AACCTCGCTGAATCGATCTCAAGAAAAGTAAGCTTCGAGGAGAGGAGAAATCCTGACTCT 266 || ||||||||||| ||||| || ||||||||| |||| ||||||||||||||||| ||| Sbjct 247 AAACTCGCTGAATCCATCTCGAGGAAAGTAAGCGTCGATGAGAGGAGAAATCCTGATTCT 306 Query 267 GTTCTGAATCTTTTTAGAAGTTACGGATTCACAGATTCTCAGATCGCAAGCATCATTACT 326 |||||||||||| |||||||||| || |||||||||||||||||| |||| |||||||| Sbjct 307 GTTCTGAATCTTCTTAGAAGTTATGGTTTCACAGATTCTCAGATCTCAAGTATCATTACA 366 Query 327 GATTATCCACGATTGCTTATAGTAGATGCTAAGAAATCTCTTGGTCACAAGCTTCAAGTT 386 ||||||| || |||||||||||||||||||||||||| |||| || ||||||||| ||| Sbjct 367 AATTATCCTCGGTTGCTTATAGTAGATGCTAAGAAATCACTTGCTCCCAAGCTTCAGGTT 426 Query 387 TTGCAGTCTAGAGGAGTTTCAAGCTCTGAGCTCACTGAGACTGTTTCTAAAGTTCCTAAA 446 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 427 TTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGACTGTTTCTACCGTTCCTAAA 486 Query 447 ATCTTGGCA 455 ||||||||| Sbjct 487 ATCTTGGCA 495 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73041792975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5