BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924796
Length=1314
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 843 0.0
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 739 0.0
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 730 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 721 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 457 1e-127
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 407 1e-112
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 398 9e-110
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 843 bits (456), Expect = 0.0
Identities = 910/1116 (82%), Gaps = 84/1116 (8%)
Strand=Plus/Plus
Query 247 TCACGGACAAGGTAAATCCTGATTCTGAGATTCTAAATCTGT-TTAGAAGTTATGGGTTC 305
|||| ||||||| |||| ||||||| | |||| |||| | | |||||||||||||||
Sbjct 332 TCACTGACAAGGGAAATTCTGATTC--CG-TTCTGGATCT-TCTCAGAAGTTATGGGTTC 387
Query 306 ACAGATTCTCAGATCTCCAACATCATTAGGACTTACCCACG-GTTGCTTATAG-CAGATT 363
|| |||||||||||||||| |||||| |||| | | || | | ||||||||| || ||
Sbjct 388 ACTGATTCTCAGATCTCCAGCATCATCAGGAGTGATTCAAGAG-TGCTTATAGACA-ATG 445
Query 364 CT-CAGAAATCACTGGGTTTC-AAGCTTAAGTTTCTGCAGTCTAGAGGAGCCTCAAGCTC 421
| | || ||| || || ||| |||||| ||||| ||||||| |||||||| ||||||||
Sbjct 446 ATGC-GACATCCCTTGG-TTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTC 503
Query 422 TGAGCTCACTGAGATTGTTTCTTCACTTCCTAAAGTCTT-GAGAA-AGAGAGGTCACAAA 479
||||||||||||| ||||||| || |||||||| |||| | ||| ||||||| ||||
Sbjct 504 TGAGCTCACTGAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAGG--GCAAA 561
Query 480 ACACTCAGCTTATTTTATGATTTCGTCAAAGAGATTATACAAG-TGGATAAGA-----AA 533
| |||||| || |||||||||| |||||| |||||| ||| | ||||||| ||
Sbjct 562 TCTCTCAGCAGATATTATGATTTCATCAAAGTCATTATAGAAGCT-GATAAGAGTTCCAA 620
Query 534 --A-G-AAACTTATCTCAATCTTT-TCTGCAGGAG-AACAAGATCAGAAATATTTTTGTT 587
| | ||| ||||||| ||||| | |||| | ||||||||||||||||| || |||
Sbjct 621 GTATGAAAAGATATCTCATTCTTTGGC-ACAGG-GTAACAAGATCAGAAATATCTTGGTT 678
Query 588 TTGAGAGAATTGGGTGTGCCGCGAAAGCGGTTA-TTATCTTTGCTCATCTCCAAATCTCA 646
||||||||| | || ||||| | |||||||||| | | |||||||||||||||||| ||
Sbjct 679 TTGAGAGAACTAGGCGTGCCTCAAAAGCGGTTACTGCT-TTTGCTCATCTCCAAATCGCA 737
Query 647 GCCCGTGTGTGGAACAG-AAAGATTTGATGCATCACTCAAGAAGGTCGTTGAGATGGGTT 705
||| || ||||||| || |||| ||||||||||||||||||||||| |||||||||||||
Sbjct 738 GCCTGTTTGTGGAAAAGAAAAG-TTTGATGCATCACTCAAGAAGGTAGTTGAGATGGGTT 796
Query 706 TTGATCCAACCACCTTAATGTTTCTCCAAGCTTTGCACATGCTTCACCAAATGAGCCACA 765
||||||||||||||| || |||| | || |||||||| |||||| ||||||||||| |||
Sbjct 797 TTGATCCAACCACCTCAACGTTTGTGCACGCTTTGCATATGCTTTACCAAATGAGCGACA 856
Query 766 AAACGATTGAAGAAAAGATTCAAGTCTATACAAGTGTAGGTTTCAT-TGTGGATGATGTA 824
|||||||||||||||| || | |||||||| ||||||||||||| | ||| |||||||||
Sbjct 857 AAACGATTGAAGAAAAAATCCGAGTCTATAGAAGTGTAGGTTTC-TCTGTTGATGATGTA 915
Query 825 TGGGCAATGTTCAAGAAGTGGCCACTCTCTCTGACACACTCGGAGAAGAAGGTAGCCAAC 884
||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct 916 TGGGCAATGTTCAAGAAGTGGCCACGCTCTTTGACACATTCGGAGAAGAAGGTAGCCAAC 975
Query 885 TCCATTGAAACATTTTTTA-GTCTAGGATTCAGCAGAGATGACTTTGTAAGGATGGTCAA 943
|| || |||||| ||| || ||||||||||||||||||||| ||| | | |||| ||||
Sbjct 976 TCTATAGAAACA-TTTCTAGGTCTAGGATTCAGCAGAGATGTGTTTATGATGATGTTCAA 1034
Query 944 GCGGTTTCCTCAGTGCATTGGATTA-TCGGCAGAGTTGGTGAAGAAGAAGACTGAGTTTC 1002
||||||||||| ||| |||||| || || ||||| ||||||||||||||||||||||
Sbjct 1035 GCGGTTTCCTCCGTGTATTGGA-TATTCTACAGAGGCGGTGAAGAAGAAGACTGAGTTTT 1093
Query 1003 TGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAACCCTAC-GGTACTTGGA 1061
|||| ||| |||||||||||||| |||||||||||| ||||| |||| | ||||||||||
Sbjct 1094 TGGTCAAGGAGATGAATTGGCCAGTAAAGGCTGTGGCTTCAATCCCT-CAGGTACTTGGA 1152
Query 1062 TACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATGTTAAAA 1121
||||||||||||||||||||||||||||||||||| || ||||||| ||| |||| ||||
Sbjct 1153 TACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATCAAAGTTCTCATGTCAAAA 1212
Query 1122 GGATTGCTCGGAGACGGAGGAAGTGAACTCCCACCTATGATGT-CTGTGTTGGCGATTAC 1180
|||||||| | | | || ||||||||| || ||| | | |||| ||| | | |||
Sbjct 1213 GGATTGCTTG-A-A---AG----TGAACTCCCTCCAATG-TCTTCTGTTTTGACAAGTAC 1262
Query 1181 C-GATAAAG-C-TTTCTTAAACAGGTATGTTATG-AAGCATGATGATCACAAGCAGCTAG 1236
| | | | | ||| ||||| |||||||| | || |||||||| || | |||||| |
Sbjct 1263 TAG-TGA-GTCGTTT-TTAAATTTGTATGTTA-GCAAACATGATGA-CA-A-GCAGCTTG 1315
Query 1237 TGCCTGAGCTAATGGCTATCTT-AC------TCG-----C--T----GATCAGAAGACAC 1278
|| ||||||| ||||| ||||| || ||| | | ||||||||| |||
Sbjct 1316 TGGCTGAGCTGATGGCAATCTTCACCGGAAATCGTGTTTCACTCACCGATCAGAAGGCAC 1375
Query 1279 GCCTAGAACAATGAGCAACATTAAGGATTGGTTTTT 1314
||||||||||||||||||| |||||||||| |||||
Sbjct 1376 GCCTAGAACAATGAGCAACGTTAAGGATTGTTTTTT 1411
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 739 bits (400), Expect = 0.0
Identities = 889/1116 (80%), Gaps = 70/1116 (6%)
Strand=Plus/Plus
Query 53 GTTGCAGAAATGGCGTAACTTGAGAGTTTCATTGCAAAATGG-ATCTTCTTTTTCCAA-T 110
||||||||||||| ||||||| || ||||| ||||||| || ||| || ||||| |
Sbjct 266 GTTGCAGAAATGGTGTAACTTTAGTCTTTCAGTGCAAAA-GGCATCACCTACATCCAATT 324
Query 111 TCGTTCTCCTCTGCTAGTGATGC-TGATGTGAG-CCTTAGAGATGGTCTAAAAGGTAACA 168
|| |||||||||||| || ||| || | |||| || ||||| ||||| |||||| ||||
Sbjct 325 TC-TTCTCCTCTGCTTCTGCTGCGTG-TTTGAGTCC-TAGAGTTGGTCGAAAAGGAAACA 381
Query 169 AATTTAAAGCCTCGTGCCTCGTTGATTCACTGGGTTTAGCTTCAAATCGCACT-ACATCG 227
| |||| || ||| | ||| ||||||||| |||| ||| | |||| | | || | |||
Sbjct 382 ACTTTACAGTCTCTTACCTTGTTGATTCATTGGGCTTAACCACAAAACTCGCTGA-ATCC 440
Query 228 GTCTCAAGTGAA-GTCAGTTTC-ACGGACAAGGTA-AATCCTGATTCTGAGATTCTAAAT 284
| ||| | ||| || || ||| | |||||| | | |||||||||||| | |||| |||
Sbjct 441 ATTTCACG-GAAGGTTAGCTTCGA-GGACAA-GAACAATCCTGATTCT--G-TTCTGAAT 494
Query 285 CTGTTT-AGAAGTTATGGGTTCACAGATTCTCAGATCTCCAACATCATTA-GGACTTACC 342
|| ||| | |||| |||||||||||| |||||||||||||| |||||||| ||| |||||
Sbjct 495 CT-TTTGACAAGTCATGGGTTCACAGGTTCTCAGATCTCCACCATCATTAGGGA-TTACC 552
Query 343 CACGGTTGCTTATAGCAGATTCTCAGAAATCACTGGGTTTCAAGCTTAAGTTTCTGCAGT 402
||| |||||||||||||||| || |||||||||| ||| ||||||| ||||| ||||||
Sbjct 553 CACAGTTGCTTATAGCAGATGCTGAGAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGT 612
Query 403 CTAGAGGAGCCTCAAGCTCTGAGCTCACTGAGATTGTTTCTTCACTTCC-TAAAGTCTTG 461
|||||||||| ||||||||||| |||||||||||||||||||| |||| ||| | |||
Sbjct 613 CTAGAGGAGCTTCAAGCTCTGAAATCACTGAGATTGTTTCTTCAGTTCCGGAAA-TATTG 671
Query 462 AGAAAGAGAGGTCACAAAAC-ACTCAGCTTATTTTATGATTTCGTCAAAGAGA--TT--A 516
|||||| ||| |||||||| | ||||| ||| ||||||||| ||||||| | ||
Sbjct 672 GGAAAGAAAGGGCACAAAACTA-TCAGCGTATACTATGATTTCATCAAAGACACTTTGCT 730
Query 517 T-ACAAGTGGAT--AAGAAAAG-AAACTTATCTCAATCTTT---TC----T--GCAGGAG 563
| | ||| | | ||| || | ||| |||| ||| ||||| | | | ||||
Sbjct 731 TGAGAAG-AGTTCCAAG-AACGAAAAGTTATGTCATTCTTTGCCACAGGGTAATCTGGAG 788
Query 564 AACAAGATCAGAAATATTTTTGTTTTGAGAGAATTGGGTGTGCCGCGA-AAGCGGTTATT 622
||||||||||||||| | | ||||| ||||||||||| |||| | | ||| ||||||
Sbjct 789 AACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTC-ACAAGTTGTTATT 847
Query 623 ATCTTTGCTCATCTCC-AAATCTCAGCCCGTGTGTGGAACAGAAAGATTTGATGCATCAC 681
|| |||||||||||| | | | || || || ||||||| ||||| |||||| | | | |
Sbjct 848 CTCCTTGCTCATCTCCGATAGC-CAACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCC 906
Query 682 TCAAGAAGGTCGTTGAGATGGGTTTTGATCCAACCACCTTAATGTTTCTCCAAGCTTTGC 741
||||||| || |||||||||||||||||||| ||||||| || |||| || ||||| | |
Sbjct 907 TCAAGAAAGTTGTTGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGCTCTAC 966
Query 742 ACA-TGCTTCACCAAATGAGCCACAAAACGATTGAAG-AAAAGATTCAAGTCTATACAAG 799
| | | || || |||||| | | ||||| || |||| ||||| | || |||||| |||
Sbjct 967 A-AGTTATTTACAAAATGAACGAGAAAACAATCGAAGAAAAAG-TCCATCTCTATAAAAG 1024
Query 800 -TGTAGG-TTTCATTGT-GGATGATGTATGGGCAATG-TTCAAGAAGTGGCCACTCTCTC 855
| |||| ||| | ||| ||| ||||||||| ||| | || || ||||||||| |||| |
Sbjct 1025 CT-TAGGCTTTGA-TGTGGGA-GATGTATGGTCAA-GTTTTAAAAAGTGGCCAATCTCGC 1080
Query 856 TGACA-CACTCGGAGAAGAAG--GTAGCCAACTCCATTGAAACATTTTTTAGTCTAGGAT 912
||| | | |||||||||||| || | ||||||||||||||||| || | |||||||
Sbjct 1081 TGAGAGTA-TCGGAGAAGAAGATGTTG--GACTCCATTGAAACATTTCTTGGCCTAGGAT 1137
Query 913 TCAGCAGAGATGACTTTG-TAAGGATGGTCAAGCGGTTTCCTCAGTGCATTGGATTATCG 971
||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||
Sbjct 1138 TCAGCAGAGATGAGTTTGCCAA-GATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCT 1196
Query 972 GCAGAGTTGGTGAAGAAGAAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAG 1031
||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1197 ACAGAGACGGTCAAAAAGAAAACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAG 1256
Query 1032 GCTGTGGTTTCAAACCCTACGGTACTTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGG 1091
||||| |||||||||||| ||||| ||||||| ||||| |||||||||| ||| ||||||
Sbjct 1257 GCTGTTGTTTCAAACCCTGCGGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGG 1316
Query 1092 TGTAACGTAATCAAAGCTCTTATGTTAAAAGGATTG 1127
||||||||||||||||||| |||| |||||||||
Sbjct 1317 GGTAACGTAATCAAAGCTCTCATGTCCAAAGGATTG 1352
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 730 bits (395), Expect = 0.0
Identities = 988/1258 (79%), Gaps = 106/1258 (8%)
Strand=Plus/Plus
Query 53 GTTGCAGAAATGGCGTAACTTGAGAGTTTCATTGCAAAATGG-ATCTTCTTTTTCCAATT 111
||| |||||||||||| | |||||||||| | ||||||| || ||| |||| |||||||
Sbjct 156 GTTACAGAAATGGCGTCATTTGAGAGTTTTAGTGCAAAA-GGCGTCTCCTTTGTCCAATT 214
Query 112 CGTTCTCCTCTGCTAGTGATGCTG-ATGTGAG-CCTTAGAGATGGTCTAAAAGGTAACAA 169
| |||||||||||| || ||| | | |||| || ||||| ||||| ||||||||| |
Sbjct 215 CCTTCTCCTCTGCTTCTGCTGC-GCGTTTGAGTCC-TAGAGTTGGTCGAAAAGGTAAGAG 272
Query 170 ATTTAAAGCCTCGTGCCTCGTTGATTCACTGGGTTTAGCTTCAAATCGCACT-ACATCGG 228
|||| || ||| | ||||||||||||| |||||||| | ||| | | || | |||||
Sbjct 273 CTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCCAAAAAGCTCGCTGA-ATCGG 331
Query 229 TCTCAAGTGAA-GTCAGTTTC-ACGGACAAGGTA-AATCCTGATTCTGAGATTCTAAATC 285
||||||| ||| || || ||| | |||||||| | || ||||| ||| | |||| ||||
Sbjct 332 TCTCAAG-GAAGGTTAGCTTCGA-GGACAAGG-ACAACCCTGACTCT--G-TTCTGAATC 385
Query 286 TGTTT-AGAAGTTATGGGTTCACAGATTCTCAGATCTCCAACATCATTA-GGACTTACCC 343
| ||| |||||| |||||||||| |||||||||||||||| |||| ||| ||| ||| ||
Sbjct 386 T-TTTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCCACCATCGTTACGGA-TTATCC 443
Query 344 ACGGTTGCTTATAGCAGATTCTCAGAAATCACTGGGTTTCAAGCTTAAGTTTCTGCAGTC 403
|| |||||| |||| ||| || |||||||||| | | ||||||| ||||| |||||||
Sbjct 444 ACAATTGCTTGTAGCTGATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTC 503
Query 404 TAGAGGAGCCTCAAGCTCTGAGCTCACTGAGATTGTTTCTTCACTTCCTAAAGTCTTGAG 463
||||||||| |||||||||||||||||||||||||||||| || |||||||| ||||| |
Sbjct 504 TAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTACAGTTCCTAAAATCTTGGG 563
Query 464 AAAGAGAGGTCACAAAAC-ACTCAGCTTATTTTATGATTTCGTCAAAGAGA-TTATACAA 521
||||||||| |||||||| | ||||| |||| ||||||||| ||||||| | || |||
Sbjct 564 AAAGAGAGGCCACAAAACTA-TCAGCGTATTCTATGATTTCATCAAAGAAACTT-TACT- 620
Query 522 GTGGATAAGAA----AAG----AAACTT-ATCTCAATCTTTTCTGCAGG--A----G-A- 564
|| |||||| ||| ||| | || |||| |||||| |||| | | |
Sbjct 621 -TG-ATAAGAGTTCCAAGTCCGAAAAGTCATGTCAACCTTTTCCACAGGGTAATCTGGAG 678
Query 565 A-CAAGATCAGAAATATTTT-TGTTTTGAGAGAATTGGGTG-TGCCGCGA-AAGCGGTTA 620
| ||||||||||||| || | |||||||||||||||||| | |||| | | ||| ||||
Sbjct 679 AACAAGATCAGAAAT-TTATCTGTTTTGAGAGAATTGGG-GATGCCTC-ACAAGTTGTTA 735
Query 621 TTATCTTTGCTCATCTCCAAATCTCAGC-CCGTGTGT--GG-AACAGAAAGATTTGATGC 676
|| | ||||||||||| | | | || ||| | || || ||||| |||||| |
Sbjct 736 TTCCCCTTGCTCATCTCTTG-TGAC-GTACC-TGTCTTCGGTAA-AGAAAAATTTGAAGA 791
Query 677 ATCACTCAAGAAGGTCGTTGAGATGGGTTTTGATCCAACCACCTTAATGTTTCTCCAAGC 736
||| |||||||| || ||||||||||||||||||||| |||||| || |||| | ||||
Sbjct 792 ATCCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCCATCCACCTCAAAGTTTGTGGAAGC 851
Query 737 TTTGCACAT-GCTTCACCAA-AT-GAGCCACAAAA-CGATTGAAGA-AAAGATTCAA-GT 790
|||| | | | |||| || || |||| |||||| | || ||||| |||| | ||| |
Sbjct 852 TTTGTGCGTTG-TTCA--AAGATTGAGCGACAAAAAC-ATAGAAGATAAAG-T-CAATG- 904
Query 791 C-TATACAAGTGT-AGG-TTTCATTGTGGA-TGATGTATGGGCAATGTTCAAGAAGTGGC 846
| |||| ||| || ||| ||| || ||||| | |||||||| || ||||||||| |||||
Sbjct 905 CGTATAAAAG-GTTAGGCTTTGAT-GTGGAAT-ATGTATGGACAGTGTTCAAGAGGTGGC 961
Query 847 CACTCTCTCTGACACACTCGGAGAAGAAGGTAGCCAACTCCATTGAAACATTTTTTAGTC 906
|| || |||||||||||||||||||||| || ||| |||||||||||||| | || |
Sbjct 962 CAAACTTTCTGACACACTCGGAGAAGAAGATATTGAACACCATTGAAACATTTCT-AGGC 1020
Query 907 -TAGGATTCAGCAGAGATGACTTT-GTAAGGATGGTCAAGCGGTTTCCTCAGTGCATTGG 964
|||| |||||||||||||| ||| | | | | ||||| ||||||||| |||||||
Sbjct 1021 CTAGGGTTCAGCAGAGATGAGTTTAGCGTGT-TAATTAAGCGCTTTCCTCAGGGCATTGG 1079
Query 965 ATTATCGGCAGAGTTGGTGAAGAAGAAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCC 1024
|||||| || ||| |||| || ||||||||||||||| |||| |||||||||||||||||
Sbjct 1080 ATTATCCGCGGAGATGGTTAAAAAGAAGACTGAGTTTTTGGTAAAGAAGATGAATTGGCC 1139
Query 1025 ACTAAAGGCTGTGGTTTCAAACCCTACGGTACTTGGATACAGCCTAGAGAAGAGGACTGT 1084
|||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 1140 ACTAAAGGCTCTTGTTTCAAACCCTGCGGTGCTTGGATACAGCCTAGAGAAGAGGACTGT 1199
Query 1085 CCCAAGGTGTAACGTAAT-CAAAGCTCTTATGTTAAAAGGATTGCTCGGAGACGGAGGAA 1143
||||||| |||||||| | ||| ||||| || | || |||||| ||||| | |
Sbjct 1200 CCCAAGGGGTAACGTAGTTCAA-GCTCTCATCTCCAAGGGATTGATCGGA-A-G------ 1250
Query 1144 GTGAACTCCCACCTATGAT-GTC-TGTGTTGGCGAT-TACCGATAAAGCT-TTCTTAAAC 1199
||||||||| | || || | | ||| || | || ||||||| | | | |||||||||
Sbjct 1251 -TGAACTCCCTTCGAT-ATCG-CGTGTCTTCGT-ATGTACCGATCAGG-TGTTCTTAAAC 1305
Query 1200 AGGTATGTTATGAAGCATGATGATCACAAGCAGCTAGTGCCTGAGCTAATGGCTATCT 1257
|||||||| | || |||||| || || | |||||| | | ||||| | ||||||||||
Sbjct 1306 AGGTATGTGAAGAGGCATGAGGA-CA-A-GCAGCTGGAGACTGAGTTGATGGCTATCT 1360
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 721 bits (390), Expect = 0.0
Identities = 963/1225 (79%), Gaps = 97/1225 (8%)
Strand=Plus/Plus
Query 87 CAAAATGGATCTTCTTTTTCCAAT-TCGT-T-CTCCTCTGCTAGTGATGCTGATGTGAGC 143
||||||||||| ||||||||||| | | | ||||||||||| || ||||||||||||
Sbjct 222 CAAAATGGATCAGCTTTTTCCAATACCTTCTCCTCCTCTGCTATTGCTGCTGATGTGAG- 280
Query 144 CT-TAGAGATGGTCTAAAAGGTAACAAATTTAAAGCCTCGTGCCTCGTTGATTCACTGGG 202
|| |||||||||| ||||||| |||| |||| || || | ||||||||||||| | ||
Sbjct 281 CTCAAGAGATGGTCGAAAAGGTCACAACTTTACAGTTTCTTACCTCGTTGATTCATTAGG 340
Query 203 TTTAGCTTC-AAA-TCGCACT-ACATCGGTCTCAAGTG-AAGTCAGTTTC-ACGGACAAG 257
||||||| | ||| ||| || | |||| |||| | || ||||||||||| | |||||
Sbjct 341 TTTAGCTACAAAAGTCG--CTGA-ATCGATCTCCA-TGAAAGTCAGTTTCGA-TAACAAG 395
Query 258 GTAAATCCTGATTCTGAGATTCTAAATCTGTTT-AGAAGTTATGGGTTCACAGATTCTCA 316
| || ||||||||| | |||| | ||| ||| |||||| |||||||||| ||||||||
Sbjct 396 GGCAACCCTGATTCT--G-TTCTGAGTCT-TTTGAGAAGTCATGGGTTCACTGATTCTCA 451
Query 317 GATCTCCAACATCATTAGGACTTACCCACGGTTGCTTATAGC-AGATTCTCAGAAATCAC 375
||||||||||||||||||||||| |||| | |||||||| | |||| || ||||||| |
Sbjct 452 GATCTCCAACATCATTAGGACTTTCCCAAGATTGCTTAT-CCTAGATGCTGAGAAATCCC 510
Query 376 TGGGTTTCAAGCTTAAGTTTCTGCAGTCTAGAGGAGCCTCAAGCTCTGAGCTCACTGAGA 435
| | | ||||||| ||||||||||||| | ||| || ||||||||||||||||| ||||
Sbjct 511 TTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCTTCAAGCTCTGAGCTCACCGAGA 570
Query 436 TTGTTTCTTCACTTCCTAAAGTCTT-GAGAA-AGAGAGGTCACAAAACACTCAGCTTATT 493
||||||| || |||| ||| | || | ||| ||| ||| |||| | |||||| ||
Sbjct 571 CTGTTTCTGCAGTTCCGAAAATATTGGGGAAGAGAAAGG--GCAAATCTCTCAGCAGATA 628
Query 494 TTATGATTTCGTCAAAGAGATTATACAAGTGGATAAGA-----AA---AG-AAACTTATC 544
|||||||||||||||| |||||| ||| |||||||| || || ||| ||||
Sbjct 629 CTATGATTTCGTCAAAGTCATTATAGAAGCGGATAAGAGTTCCAAGTTAGAAAAGTTATG 688
Query 545 TCAATCTTT---------T-CT--GCAGGAGAACAAGATCAGAAATATT-TTTGTTTTGA 591
||| ||||| | | |||||||||||| ||||||||| || || || ||||
Sbjct 689 TCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAAAT-TTATTGGTGTTGA 747
Query 592 GAGAATTGGGTGTGCCGCGA-AAGCGGTTATTATCTTTGCTCATCTCCAAAT--CTCAGC 648
||||| |||||||||| | | | | |||||| || ||||| || ||| || | ||
Sbjct 748 GAGAAATGGGTGTGCCTC-AGAGGTTGTTATTCTCATTGCTTATATCC-GATGCCGGAG- 804
Query 649 CCGTGTGTGG-AACAGAAAGATTTGATGCATCACTCAAGAAGGTC-GTTGAGATGGGTTT 706
|| ||||| || ||||| |||| | | |||||||||||||| | |||||||| |||||
Sbjct 805 ATGTTTGTGGTAA-AGAAAAATTTAAAGAATCACTCAAGAAGG-CTGTTGAGATTGGTTT 862
Query 707 TGATCCAACCACCTTAA-TGTTTCTCCAAGCT-TTGCACATGCTTCACCAAATGAGCCAC 764
||||||||||||| || | ||| || ||||| || || | ||| || | | ||| ||
Sbjct 863 TGATCCAACCACCGCAACT-TTTGTCAAAGCTCTT-AACGTTCTTTACGGATTAAGCGAC 920
Query 765 AAAACG-ATTGAAGAA-AAGATTCAA-GTCTATACAA-GTGTAGGTTTCATTGTGGATGA 820
||| | |||||| || || |||||| | || || || || |||| || |||||| ||
Sbjct 921 -AAAGGAATTGAA-AATAA-ATTCAATGCCTGTAAAAGGT-TAGGCTTGGCTGTGGACGA 976
Query 821 TGTATGGGCAATGTTCAAGAAGTGGCCACTC-TCTCTGACACACTCGGAGAAGAAGGTAG 879
|||||||||||||||||||||||||||| | | ||||||| | || ||||||||| |||
Sbjct 977 TGTATGGGCAATGTTCAAGAAGTGGCCAAACAT-TCTGACAAAGTCTGAGAAGAAGATAG 1035
Query 880 CCAACTCCATTGAAACATTTTTTA-GTCTAGGATTCAGCAGAGATGACTTTGTAAGGATG 938
|||||| |||||||| ||| || | |||||||||||||||||||| ||| | | ||||
Sbjct 1036 AGAACTCCGTTGAAACA-TTTCTAGGCCTAGGATTCAGCAGAGATGAGTTTTTGATGATG 1094
Query 939 GTCAAGCGGTTTCCTCAGTGCATTGGATTA-TCGGCAGAGTTGGTGAAGAAGAAGACTGA 997
|||||||| || ||||||||||||||| || || |||||||| |||||| |||||||||
Sbjct 1095 GTCAAGCGATTCCCTCAGTGCATTGGA-TATTCTACAGAGTTGATGAAGACGAAGACTGA 1153
Query 998 GTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAACCCTAC-GGTAC 1056
||||||||||| | ||||||||||||||||||||||||||| ||||| |||| | |||||
Sbjct 1154 GTTTCTGGTGACGGAGATGAATTGGCCACTAAAGGCTGTGGCTTCAATCCCT-CAGGTAC 1212
Query 1057 TTGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATGT 1116
| |||||||||||||||||||||||||||||||||||||| || ||||||| ||| || |
Sbjct 1213 TCGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATCAAAGTTCTCATCT 1272
Query 1117 TAAAAGGATTGCTCGGAGACGGAGGAAGTGAACTCCCACCTATGATG-TCTGTGTTGGCG 1175
|||||||||||||| | | || ||||||||| || || || ||||| ||| |
Sbjct 1273 CAAAAGGATTGCTCG-A-A---AG----TGAACTCCCTCCAAT-ATCCTCTGTTTTGACA 1322
Query 1176 ATTACC-GATAAAGC-TTTCTTAAACAGGTATGTTATGAAGCATGATGATCACAAGCAGC 1233
| |||| | | | | ||| ||| | | |||||||| ||| |||||||| || | |||||
Sbjct 1323 AGTACCAG-TGAGGTGTTT-TTATATATGTATGTTAGGAAACATGATGA-CA-A-GCAGC 1377
Query 1234 TAGTGCCTGAGCTAATGGCTATCTT 1258
| ||| ||||| | |||||||||||
Sbjct 1378 TTGTGGCTGAGTTGATGGCTATCTT 1402
Score = 63.9 bits (34), Expect = 4e-09
Identities = 46/51 (90%), Gaps = 4/51 (8%)
Strand=Plus/Plus
Query 1266 GATCAGAAGACACGCCTAGAACAATGAGCAACATT-AAGGATTGG-TTTTT 1314
||||||||||||||||||||||||||||||| | | |||||| || |||||
Sbjct 1428 GATCAGAAGACACGCCTAGAACAATGAGCAA-AGTCAAGGAT-GGATTTTT 1476
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 457 bits (247), Expect = 1e-127
Identities = 676/871 (78%), Gaps = 78/871 (9%)
Strand=Plus/Plus
Query 53 GTTGCAGAAATGGCGTAACTTGAGAGTTTCAT-TGCAAAATGGATCTTCTTTTTCCAATT 111
|||||||||||||||| | |||||| ||| | ||||||||||||| ||||||| ||||
Sbjct 268 GTTGCAGAAATGGCGTCATTTGAGA-TTTGTTGTGCAAAATGGATCAGCTTTTTCTAATT 326
Query 112 CGT-TCTCCTCTGCTAGTGATGCTGATGTGAGCCT-TAGAGATGGTCTAAAAGGT-AACA 168
| | | || |||||||||| | ||||| |||| || |||||||||| |||| || || |
Sbjct 327 CCTAT-TCTTCTGCTAGTGCTACTGATTTGAG-CTCAAGAGATGGTCGAAAA-GTGAAGA 383
Query 169 AATTTAAAGCCTCGTGCCTCGTTGATTCACTGGGTTTAGCTTCAAATCGCACT-ACATCG 227
| |||| | ||| | ||||||||||||| ||||||||||| |||| | | || | |||
Sbjct 384 ACTTTACTGTCTCTTACCTCGTTGATTCATTGGGTTTAGCTACAAAACTCGCTGA-ATCA 442
Query 228 GTCTC-AAGTGAAGTCAGTTTCACGGACAAGGTAAATCCTGATTCTGAGATTCTAAATCT 286
|||| ||| ||||||||||| | |||||| |||||||||| | || |||| | |||
Sbjct 443 ATCTCAAAG-AAAGTCAGTTTCGTGAACAAGGGCAATCCTGATT-T-AG-TTCTGAGTCT 498
Query 287 GTTTAGAAGTTATGGGTTCACAGATTCTCAGATCTCCAACATCATTA-GGACTTA-CCCA 344
||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| || |
Sbjct 499 TTTTAGAAGTTATGGGTTCACAAATTCTCAGATCTCCAGCATCATTACGGA-TTATCCTA 557
Query 345 CGGTTGCTTATAGCAGATTCTCAGAAATCACTGGGTTTCAAGCTTAAGTTTCTGCAGTCT 404
| |||||| || |||| || |||||||||| | | |||||||| ||||| || |||||
Sbjct 558 -GATTGCTTCTAATAGATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCT 616
Query 405 AGAGGAGCCTCAAGCTCTGAGCTCACTGAGATTGTTTCTTCACTTCCTAAAGTCTTGAGA 464
|||||||| |||||| ||||||||||| ||||||||||| || |||||||| | ||| ||
Sbjct 617 AGAGGAGCTTCAAGCCCTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATTGGGA 676
Query 465 A--AGAGAGGTCACAAAACACTCA-GCTTATTTTATGATTTCGTCAAAGAGATTATACAA 521
| | ||||| | || | || | || || |||||||||||||||||||||||| ||
Sbjct 677 ATGAAAGAGG-GA-AAGTCTCT-AGGCAGATACTATGATTTCGTCAAAGAGATTATAGAA 733
Query 522 GTGGATAAGA-----AA--A-GAAAC-TTATCTCAATCTTT-TC---TGC----AGG-A- 562
| ||||||| || | ||||| || | |||| |||| | || ||| |
Sbjct 734 GCAGATAAGAGTTCCAAGTACGAAACTTTGTGTCAACCTTTGCCAGAGGCTAATAGGCAG 793
Query 563 -G-AACAAGATCAGAAATATTTTTGTT-TTGAGAGAATTGGGTGTGCCGCGA-AAGCGGT 618
| || || ||||||||| ||| ||| || ||||| ||||||||||| | | ||| ||
Sbjct 794 GGTAATAAAATCAGAAATGTTTCGGTTCTT-AGAGACTTGGGTGTGCCTC-AGAAGTTGT 851
Query 619 TATTATCTTTGCTCATCTCCAAAT-CTCAGCCCGTGTGTGGAACAGAAAGA-TTTGATGC 676
|||| || |||||||||| | || | || || || ||||||| ||||| | ||||| |
Sbjct 852 TATTCTCCTTGCTCATCT-CTGATGCCCAACCTGTTTGTGGAAAAGAAA-ATTTTGAAGA 909
Query 677 ATCACTCAAGAAGGTCGTTGAGATGGGTTTTGATCCAACCACCTTAATGTTTCTCCAAGC 736
||||||||||||||| |||||||||||||||||||||||||||| || |||| |||||||
Sbjct 910 ATCACTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGC 969
Query 737 T-TT-GCACATGCTTCACCAAATG-AGCC-ACAAAACGATTGAAGAAA-AGATTCAA-GT 790
| || | | || || || | || | || ||||||| || ||||||| || || || ||
Sbjct 970 TCTTAGGGC-TGTTT-AC-AGATTCA-CCGACAAAACAATAGAAGAAAGAG-TT-AATGT 1023
Query 791 CTATACAAGTGTA-GG-TTT-CATTGTGGATGATGTATGGGCAATGTTCAAGAAGTGGCC 847
|||| ||| || || ||| | | ||||| ||||||||||||||||||||||| || ||
Sbjct 1024 GTATA-AAGGGTTCGGCTTTGC-T-GTGGAAGATGTATGGGCAATGTTCAAGAAATGTCC 1080
Query 848 --ACTCTCTCTGACACACT-CGGAGAAGAAG 875
||| | | ||| | | | |||||||||||
Sbjct 1081 TTACTTT-T-TGA-ATAGTTCGGAGAAGAAG 1108
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 407 bits (220), Expect = 1e-112
Identities = 619/801 (77%), Gaps = 70/801 (9%)
Strand=Plus/Plus
Query 88 AAAATGG-ATCTTCTTTTTCCAATTCGTTCTCCTCTGCTAGTGATGCTGATGTGAGCCTT 146
|||| || |||| ||||||||||||| ||||||| ||||| || | | |||| |||||||
Sbjct 83 AAAA-GGCATCTCCTTTTTCCAATTCCTTCTCCTATGCTAATGCTACAGATGCGAGCCTT 141
Query 147 AGAGATGGTCTAAAA-GGTAACAAATTTAAAGCCTCGTGCCTCGTTGATTCACTGGGTTT 205
|||| ||||| |||| ||| | ||| | ||| | ||||||||||||| |||||||
Sbjct 142 AGAGCTGGTCGAAAAGGGT-TGAGTTTTTCTGTCTCTTACCTCGTTGATTCATTGGGTTT 200
Query 206 AGCTTCAAA--TCGCACTACATCGGTCTC-AAGTGAAGTCAGTTTC-ACGGAC-AAGGTA 260
| || ||| ||||| | |||| |||| ||| ||||||| ||| | |||| ||||
Sbjct 201 ACCTAAAAAGGTCGCA-GA-ATCGATCTCAAAG-AAAGTCAGCTTCGA-GGACAAAGG-C 255
Query 261 AATCCTGATTCTGAGATTCTAAATCTGTTTAGAAGTTATGGGTTCACAGATTCTCAGATC 320
|||||||||||| | |||| | ||| || |||||| |||||||||| ||||||||||||
Sbjct 256 AATCCTGATTCT--G-TTCTGAGTCTATTGAGAAGTCATGGGTTCACTGATTCTCAGATC 312
Query 321 TCCAA-CATCATTA-GGACTTACCCACGGTTGCTTA-TAGCAGATTCTCAGAAATCACTG 377
| ||| |||||||| ||| ||| |||| |||| || |||| ||| || |||||||| |
Sbjct 313 T-CAAGCATCATTACGGA-TTATCCACAATTGC-TAGTAGCTGATGCTGAGAAATCAATT 369
Query 378 GGTTTCAAGCTTAAGTTTCTGCAGTCTAGAGGAGCCTCAAGCTCTGAGCTCACTGAGATT 437
||| ||||||| ||||||||||||| |||||||| ||||| |||||||||||| | |||
Sbjct 370 GGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAAGGTCTGAGCTCACTCATATT 429
Query 438 GTTTCTTCACTTCCT-AAAGTCTTGAGAAAGAGAGGTCACAAAAC-ACTCAGCTTATTTT 495
|| ||| || ||||| ||| ||||| | |||||||| ||||||| | ||||| ||| |
Sbjct 430 GTATCTACAGTTCCTGAAA-TCTTGGGGAAGAGAGGGGACAAAACTA-TCAGCATATACT 487
Query 496 ATGATTTCGTCAAAGAGATTATACAAGTGGATAAGA-----AA---AG-AAACTTATCTC 546
||||||| || |||||||||||| ||| |||||||| || | ||| |||| ||
Sbjct 488 ATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTATGTC 547
Query 547 AATCTTT---------T-CT--GCAGGAGAACAAGATCAGAAATATTTTTGTTTTGAGAG 594
| ||||| | | |||||||||||| ||||||||| |||| ||||||||||
Sbjct 548 ATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAAATGTTTTGGTTTTGAGAG 607
Query 595 AATTGGGTGTGCCGCGAAA-GCGGTTATTATCTTTGCTCATCTCCAAATC-TCAGCCCGT 652
|||||||||| || | ||| | ||| || | ||||| || | | ||| || || ||
Sbjct 608 AATTGGGTGTTCCTC-AAAGGTTGTTGTTCCCATTGCTTATAT-CTGATCACCAACCTGT 665
Query 653 GTGTGGAACAGAAAGA-TTTGATGCATCACTCAAGAAGGTCGTTGAGATGGGTTTTGATC 711
||||||| ||||| | ||||| | |||||||||||| || |||||||||||||||||||
Sbjct 666 CTGTGGAAAAGAAA-ATTTTGAAGAATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATC 724
Query 712 CAACCACCTTAATGTTTCTCCAAGCT-TT-GCACATGCTTCACCAAATGA-GCCACAAAA 768
||||||||| || |||| || ||||| || | || || || | || || ||||||
Sbjct 725 CAACCACCTCAAAGTTTGTCAAAGCTCTTAGGGT-TGTTT-AC-AGATTCCGCGACAAAA 781
Query 769 CGATTGAAG-AAAAGATTCAA-GTCTATACAAGTGTAGG-TTT-CATTGT-GGATGATGT 823
| || |||| ||||| || || |||| || |||| |||| ||| | | || ||| |||||
Sbjct 782 CTATAGAAGCAAAAG-TT-AATGTCTGTAAAAGTTTAGGCTTTTC-T-GTTGGA-GATGT 836
Query 824 ATGGGCAATGTTCAAGAAGTG 844
|||||||||||| ||||||||
Sbjct 837 ATGGGCAATGTTTAAGAAGTG 857
Score = 298 bits (161), Expect = 9e-80
Identities = 308/377 (82%), Gaps = 18/377 (5%)
Strand=Plus/Plus
Query 882 AACTCCATTGAAACATTTTTTAGTC-TAGGATTCAGCAGAGATGACTTTGTAAGGATGGT 940
||||||||||||||| ||| ||| | ||||||| ||||||||||| ||| || ||| |
Sbjct 1000 AACTCCATTGAAACA-TTTCTAGGCTTAGGATTTAGCAGAGATGAGGTTGCAATGATAGC 1058
Query 941 CAAGCGGTTTCCTCAGTGCATTGGATTATCGGCAGAGTTGGTGAAGAAGAAGACTGAGTT 1000
|||||| |||||||| ||| || ||||| |||||| |||||||| |||||||||||
Sbjct 1059 CAAGCGCTTTCCTCAATGCCTTATTTTATCTGCAGAGACAGTGAAGAAAAAGACTGAGTT 1118
Query 1001 TCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAAACCCTACGGTACTTGG 1060
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1119 TCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAACCCCTGCGGTACTTGG 1178
Query 1061 ATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAACGTAATCAAAGCTCTTATGTTAAA 1120
||||||| |||||||||||||| ||||||||||||| ||||| |||||||| |||| ||
Sbjct 1179 ATACAGCTTAGAGAAGAGGACTATCCCAAGGTGTAATGTAATTAAAGCTCTCATGTCCAA 1238
Query 1121 AGGATTGCTCGGAGACGGAGGAAGTGAACTCCCACCTATGAT-GTCTGTGTTGGCGAT-T 1178
||||| ||| ||| | | ||||||||| ||| | |||||| |||| || |
Sbjct 1239 AGGATCGCTTGGA-A-G-------TGAACTCCCTGGAATG-TCGTCTGTTTTGGT-ATGT 1287
Query 1179 ACCGATAAAGCTTTCTTAAACAGGTATGTTATGAAGCATGATGATCACAAGCAGCTAGTG 1238
||| || ||| |||||| ||||||||| | ||| |||||||| || | | || ||||
Sbjct 1288 ACCAATGAAGAATTCTTATGCAGGTATGTGAAGAACCATGATGA-CA-A-GAAGATAGTA 1344
Query 1239 CCTGAGCTAATGGCTAT 1255
|||||| | ||||||||
Sbjct 1345 CCTGAGTTGATGGCTAT 1361
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 398 bits (215), Expect = 9e-110
Identities = 626/812 (77%), Gaps = 78/812 (10%)
Strand=Plus/Plus
Query 84 TTGCAAAATGGA-TCT-T-CTTTTTCCAATTCGTTCTC--CT-CTGCTAGTGATGCTGAT 137
|||||||||| | ||| | |||||||||||| ||||| || ||||| || |||||||
Sbjct 257 TTGCAAAATGTATTCTCTGTTTTTTCCAATTCATTCTCTTCTGTTGCTACTGCTGCTGAT 316
Query 138 GTGAGCCTTAGAGATGGTCTAAAAGGTAACAAATTTAAAGCCTCGTGCCTCGTTGATTCA 197
|||||| |||||||| ||| |||||||||||| |||| | ||| | |||||||||||||
Sbjct 317 GTGAGCTTTAGAGATAGTCGAAAAGGTAACAACTTTACTGTCTCTTACCTCGTTGATTCA 376
Query 198 CTGGGTTTAGCTTCAAA--TCGCACTACATCGGTCTCAAGTG-AAGTCAGTTTC-ACGGA 253
|||||||||||||||| ||||| | |||| |||| | || ||||||||||| | | |
Sbjct 377 TTGGGTTTAGCTTCAAAGCTCGCA-GA-ATCGATCTCGA-TGAAAGTCAGTTTCGA-GAA 432
Query 254 CAAGGTAAATCCTGATTCTGAGATTCTAAATCTGT-TTAGAAGTTATGGGTTCACAGATT 312
||||| ||||||||| | || |||| ||||| | |||||||| ||| |||||||||||
Sbjct 433 CAAGGGCAATCCTGATAC--AG-TTCTGAATCT-TCTTAGAAGTCATGAGTTCACAGATT 488
Query 313 CTCAGATCTCCAACATCA-TTAGGACTTA-CCCACGGTTGCTTATAGCAGATTCTCAGAA 370
|||||||||||| ||||| || ||| ||| || || |||||| |||||||| || | ||
Sbjct 489 CTCAGATCTCCAGCATCATTTCGGA-TTATCCAAC-ATTGCTTGTAGCAGATGCTGA-AA 545
Query 371 A-TCACTGGGTTTCAAGCTTAAGTTTCTGCAGTCTAGAGGAGCCTCAAGCTCTGAGCTCA 429
| ||||| ||| ||||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 546 ATTCACTTGGTCCCAAGCTTCTGTTGATGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCA 605
Query 430 CTGAGATTGTTTCTTCACTTCCTAAAGTCTTGAGAAA-GAGAGGTCACAAAAC-ACTCAG 487
|||||||||||||| | |||||||| |||| || || || ||| |||||| | || |
Sbjct 606 CTGAGATTGTTTCTAAAGTTCCTAAAATCTT-AGGAATGAAAGGGGACAAAAGTA-TCGG 663
Query 488 CTTATTTTATGATTTCGTCAAAGAGATTATACAAGTGGATAAGAA----AAG----AAA- 538
| || |||||| ||||||||||||||||| ||| |||||||| ||| |||
Sbjct 664 CAGATACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGCTCCAAGTTCGAAAA 723
Query 539 -CTTATCTCAATCTTTTC-TGCAGG--AG-AA-CA--AGA-T-----CAGAAATATTTTT 584
|| | ||| ||||| | || ||| || || || ||| | ||| ||| | ||
Sbjct 724 GCTG-TGTCATTCTTTGCCTG-AGGGTAGTAAGCAGGAGAATAAAATCAGGAATGTATTG 781
Query 585 GTTTTGAGAGAATTGGGTGTGCCGCGAAAGCG--GTTATTATCTTTGCTCATCTCCAAAT 642
||||||||||| ||||||||||| | |||| | |||||| || |||||| |||| || |
Sbjct 782 GTTTTGAGAGATTTGGGTGTGCCTC-AAAG-GTTGTTATTCTCATTGCTCTTCTCTAA-T 838
Query 643 CTC-A-GCCCGTGTGTGGAACAGAAA-GATTTGATGCATCACTCAAGAAGGTCGTTGAGA 699
| | | | | | ||||||| ||||| | ||||| | ||||||||| ||||| |||| ||
Sbjct 839 CACCATGTCTGC-TGTGGAAAAGAAAAG-TTTGAAGAATCACTCAACAAGGTTGTTGGGA 896
Query 700 TGGGTTTTGATCCAACCAC-CTTAATGTTTCTCCAAGCTTTGCACAT-GCTTCACCAAAT 757
||||||||||||| ||||| | || |||| | ||||||| ||| | || || | |
Sbjct 897 TGGGTTTTGATCCCACCACTCCAAA-GTTTGTGGAAGCTTTATGCATTGTTT-ACGGATT 954
Query 758 GAGCCACAAAACGATT-GAAGAAAAGATTCAA-GTCTATACA-AG-TGTAGGTTTCATTG 813
|||| |||||| || | |||||||| ||||| ||||| | | || | | || || | ||
Sbjct 955 GAGCGACAAAA-GACTAGAAGAAAAC-TTCAATGTCTACA-AGAGATTT-GGCTTAACTG 1010
Query 814 TGGATGATGTATGGGCAA-TGTTCAAGAAGTG 844
| | |||||||||| || | |||||||||||
Sbjct 1011 TAAACGATGTATGGG-AACTTTTCAAGAAGTG 1041
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64658301960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5