BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924802
Length=1196
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 933 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 878 0.0
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 856 0.0
AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 760 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 556 1e-157
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 523 1e-147
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 510 1e-143
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 496 3e-139
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 451 6e-126
AT3G17400.1 | Symbols: | F-box family protein | chr3:5954887-5... 67.6 3e-10
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 933 bits (505), Expect = 0.0
Identities = 863/1029 (84%), Gaps = 51/1029 (5%)
Strand=Plus/Plus
Query 1 TCATGGGTTCACAGATTCTCAGATGTCCAA-CATCATTA-AGATGTATCCACTATTGCTT 58
|||||||||||| ||||||||||| | ||| |||||||| ||| ||||||| ||||| |
Sbjct 288 TCATGGGTTCACTGATTCTCAGATCT-CAAGCATCATTACGGAT-TATCCACAATTGC-T 344
Query 59 A-TAGCAGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGC 117
| |||| |||||||| || ||| |||||||||||||||||||| ||||||| ||||||||
Sbjct 345 AGTAGCTGATGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGC 404
Query 118 TTCAAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGA 177
|||||| |||||||||||||| |||| |||| ||||||| ||||||||||||||||||
Sbjct 405 TTCAAGGTCTGAGCTCACTCATATTGTATCTACAGTTCCTGAAATCTTGGGGAAGAGAG- 463
Query 178 GGG-CAAATCTATTAGCAGATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGA 236
||| |||| |||| |||| |||||||||||| | |||| ||||||||||| |||||||
Sbjct 464 GGGACAAAACTATCAGCATATACTATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGA 523
Query 237 GTTCCTCCAAGTAT-GAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAAT 295
| | ||||||| | ||||||||||||||| |||||||||||||||||| |||||| ||
Sbjct 524 G-T--TCCAAGT-TCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAAC 579
Query 296 AAAATCAGAAATGTTTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTCC 355
||||||||||||||||||||| |||||||||||||||| ||||| |||||||| ||| ||
Sbjct 580 AAAATCAGAAATGTTTTGGTTTTGAGAGAATTGGGTGTTCCTCAAAGGTTGTTGTTC-CC 638
Query 356 -TTGCTCATCTCTGAT-AGCGGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCA 413
||||| || |||||| | | |||||| |||||||||||||| ||||||||||| ||||
Sbjct 639 ATTGCTTATATCTGATCA-CCAACCTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCA 697
Query 414 AGAAGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTTGTCAAAGCTCTCCATG 473
|||| ||||||||||||||||||||||||||||| || ||||||||||||||||| | |
Sbjct 698 AGAAAGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCAAAGCTCT-TAGG 756
Query 474 GCT-TTTACCA-AATGAGTGACAAAACAATTGAAGAAAAACTCGATGTCTACAAAAGGTT 531
| | |||| || | | | |||||||| || |||| |||| | |||||| ||||| ||
Sbjct 757 GTTGTTTA-CAGATTCCGCGACAAAACTATAGAAGCAAAAGTTAATGTCTGTAAAAGTTT 815
Query 532 AGGCTTTTCTG-TGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTGCTCTT-TGAAA 589
||||||||||| ||| ||||||||||| ||| || |||||||| |||| || || ||||
Sbjct 816 AGGCTTTTCTGTTGG-AGATGTATGGGCAATGTTTAAGAAGTGTCCTTCCT-TTCTGAAT 873
Query 590 TTCTCAGAGGAA-AAGATAACTCAGACGATT--GAAACCTTGAAGATGTGTGGTCTGGAC 646
||||| || ||| |||||| ||| || || |||||| |||||| |||||| || |
Sbjct 874 TTCTCTGA-GAACAAGATAGTTCAAAC--TTGGGAAACCCTGAAGAAGTGTGGACTACTC 930
Query 647 GAAAACGAAGTCCT-TCAAGTGCTGAAGAAGTATCCGCAATTCA-TACGTATTTCAGAGC 704
||| |||| ||||| || |||| ||||||||| ||| |||| || || | ||||||||
Sbjct 931 GAAGACGATGTCCTCTC-AGTGTTGAAGAAGTTTCCACAATGCATTA-ATGCTTCAGAGC 988
Query 705 AGAAGATATTGAGTTTAATTGAAACATTTTTAGG-TGTAGGATTCAGTAGAGATGAATGC 763
|||||||| ||| | |||||||||||| |||| | ||||||| || ||||||| | |
Sbjct 989 AGAAGATAATGAACTCCATTGAAACATTTCTAGGCT-TAGGATTTAGCAGAGATG-A-G- 1044
Query 764 G-TG--ATGATAGCCAAGGGCTTTCCT-ATGTGCTTTGGATTGTCTGCAGAGACGGTGAA 819
| || |||||||||||| |||||||| | ||| || || ||||||||||| |||||
Sbjct 1045 GTTGCAATGATAGCCAAGCGCTTTCCTCA-ATGCCTTATTTTATCTGCAGAGACAGTGAA 1103
Query 820 -AAAGAAGACTGAGTTTTTGGTGAAAAAGATGAATTGGCCACTAAAGTCTGTGGTTTCGA 878
||| |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |
Sbjct 1104 GAAA-AAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTC-A 1161
Query 879 A-CCCTGCGGGACTTGGATACAGCTT-GCAGAAGAGGATTGTTCCAAGGTGTAATGTAAT 936
| |||||||| ||||||||||||||| | ||||||||| | | |||||||||||||||||
Sbjct 1162 ACCCCTGCGGTACTTGGATACAGCTTAG-AGAAGAGGACTATCCCAAGGTGTAATGTAAT 1220
Query 937 CAAAGCTCTCATGTCCAAAGGATCGCTTGGAAGTGAACTCCCTTCAGTGGCTTCTGTCTT 996
|||||||||||||||||||||||||||||||||||||||||| | || | ||||| ||
Sbjct 1221 TAAAGCTCTCATGTCCAAAGGATCGCTTGGAAGTGAACTCCCTGGAATGTCGTCTGTTTT 1280
Query 997 GGCATGTAC 1005
|| ||||||
Sbjct 1281 GGTATGTAC 1289
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 878 bits (475), Expect = 0.0
Identities = 861/1044 (82%), Gaps = 40/1044 (4%)
Strand=Plus/Plus
Query 3 ATGGGTTCACAGATTCTCAGATGTCCAACATCATTA-AGATGTATCC-ACTATTGCTTAT 60
||||||||||| |||||||||| |||| |||||||| ||| ||||| | ||||||| |
Sbjct 510 ATGGGTTCACAAATTCTCAGATCTCCAGCATCATTACGGAT-TATCCTA-GATTGCTTCT 567
Query 61 AGCAGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCTTC 120
| ||||||||| || ||||||| | |||||||||||||||| |||| |||||||||||
Sbjct 568 AATAGATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTC 627
Query 121 AAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAA-GAGAGAGG 179
|||| |||||||||||||| ||||||||| |||||||||||| || ||||| || |||||
Sbjct 628 AAGCCCTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATT-GGGAATGAAAGAGG 686
Query 180 GCAAA-TCTATTA-GCAGATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGAG 237
| ||| ||| || ||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 687 G-AAAGTCT-CTAGGCAGATACTATGATTTCGTCAAAGAGATTATAGAAGCAGATAAGAG 744
Query 238 TTCCTCCAAGTATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAATAA 297
| |||||||| |||| || ||||| |||||||||||| || |||||||| ||||||
Sbjct 745 -T--TCCAAGTACGAAACTTTGTGTCAACCTTTGCCAGAGGCTAATAGGCAGGGTAATAA 801
Query 298 AATCAGAAATGTTTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTCCTT 357
|||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||||
Sbjct 802 AATCAGAAATGTTTCGGTTCTTAGAGACTTGGGTGTGCCTCAGAAGTTGTTATTCTCCTT 861
Query 358 GCTCATCTCTGATAG-CGGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCAAGA 416
||||||||||||| | | |||||| |||||||||||||| ||||||||||| |||||||
Sbjct 862 GCTCATCTCTGAT-GCCCAACCTGTTTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGA 920
Query 417 AGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTTGTCAAAGCTCTCCATGGCT 476
||||||||||||||||||||||||||||||| || ||||||||| ||||||| | ||||
Sbjct 921 AGGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGCTCTT-AGGGCT 979
Query 477 -TTTACCAAATG-AGTGACAAAACAATTGAAGAAAAACTCGATGTCTACAAAAGGTTAGG 534
||||| | || | ||||||||||| ||||||| | | |||| || ||| |||| ||
Sbjct 980 GTTTAC-AGATTCACCGACAAAACAATAGAAGAAAGAGTTAATGTGTATAAAGGGTTCGG 1038
Query 535 CTTTTCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTGCTCTTTGAA-ATTCT 593
|||| |||||||||||||||||| ||| |||||||| || |||| || |||||| | | |
Sbjct 1039 CTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAATGTCCTTACTTTTTGAATAGT-T 1097
Query 594 CAGAGGAA-AAGATAACTCAGACGATTGAAACCTTGAAGATGTGTGGTCTGGACGAAAAC 652
| ||| || ||||| |||||| ||||||||| |||||| |||||| || |||| ||
Sbjct 1098 CGGAG-AAGAAGATTGGTCAGACAATTGAAACCCTGAAGAAGTGTGGACTACTCGAAGAC 1156
Query 653 GAAGTCCT-TCAAGTGCTGAAGAAGTATCCGCAATTCATACGTATTTCAGAGCAGAAGAT 711
|| ||| | ||| ||| |||| ||||||||||| | ||| ||| |||||||||||||||
Sbjct 1157 GAGGTCATCTCA-GTGTTGAAAAAGTATCCGCAGTGCATTGGTACTTCAGAGCAGAAGAT 1215
Query 712 ATTGAGTTTAATTGAAACATTTTTAGGTGTAGGATTCAGTAGAGATGAATGCGTGATGAT 771
||||| | ||||||| |||| |||| |||| ||||| |||||||| | | | | ||
Sbjct 1216 ATTGAACTCCATTGAAATATTTCTAGGCCTAGGCTTCAGCAGAGATGAGTTCATAACAAT 1275
Query 772 AGCCAAGGGCTTTCCT-A-TGTGCTT-TGGATTGTCTGCAGAGACGGTGAAAAAGAAGAC 828
| ||| |||||||| | ||| ||| | || ||||||||||||||||| |||||||
Sbjct 1276 GGTTAAGCGCTTTCCTCAGTGT-CTTATT--TTATCTGCAGAGACGGTGAAGAAGAAGAT 1332
Query 829 TGAGTTTTTGGTGAAAAAGATGAATTGGCCACTAAAGTCTGTGGTTTCGAACCCTGCGGG 888
||||||| ||||||| ||||||||||||||||| ||| ||||||||| || ||| |||
Sbjct 1333 TGAGTTTGTGGTGAAGAAGATGAATTGGCCACTGAAGGATGTGGTTTCAAATCCTACGGT 1392
Query 889 ACTTGGATACAGCTTGCAGAAGAGGATTGTTCCAAGGTGTAATGTAATCAAAGCTCTCAT 948
||||||||||| | || ||||||||| ||| |||||||||||||| || ||||||||||
Sbjct 1393 ACTTGGATACAACCTGGAGAAGAGGACTGTCCCAAGGTGTAATGTTATTGAAGCTCTCAT 1452
Query 949 GTCCAAAGGA-T-C--G----CTT-GGAAGTGAACTCCCTTCAGTGGCTTCTGTCTTGGC 999
||| ||| || | | | | ||||||||||||||| || || | ||||| ||||
Sbjct 1453 GTCAAAAAGACTTCTCGGAGACACAGGAAGTGAACTCCCTCCAATGTCGTCTGTTTTGGT 1512
Query 1000 ATGTACTGATCAGGCGTTCTTAAA 1023
|||||||||| || |||||||||
Sbjct 1513 ATGTACTGATGAGTTGTTCTTAAA 1536
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 856 bits (463), Expect = 0.0
Identities = 861/1047 (82%), Gaps = 51/1047 (5%)
Strand=Plus/Plus
Query 1 TCATGGGTTCACAGATTCTCAGATGTCCAACATCA-TTAAGATGTATCC-ACTATTGCTT 58
||||| |||||||||||||||||| |||| ||||| || ||| ||||| || |||||||
Sbjct 472 TCATGAGTTCACAGATTCTCAGATCTCCAGCATCATTTCGGAT-TATCCAAC-ATTGCTT 529
Query 59 ATAGCAGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCT 118
||||||||||||| || ||||||||||||||||||| ||| ||||||| |||||||||
Sbjct 530 GTAGCAGATGCTGAAAATTCACTTGGTCCCAAGCTTCTGTTGATGCAGTCTAGAGGAGCT 589
Query 119 TCAAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAA-GAGAGA 177
|||||||||||||||||| || ||||||||||||||||||||||||| |||| || ||
Sbjct 590 TCAAGCTCTGAGCTCACTGAGATTGTTTCTAAAGTTCCTAAAATCTT-AGGAATGAAAG- 647
Query 178 GGG-CAAATCTATTAGCAGATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGA 236
||| |||| ||| |||||||||||||| || |||||| ||||||||||| |||||||
Sbjct 648 GGGACAAAAGTATCGGCAGATACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGA 707
Query 237 GTTCCTCCAAGTAT-GAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAAT 295
| |||||||| | |||||| | |||||| ||||||| |||||||||| |||||| |||
Sbjct 708 G---CTCCAAGT-TCGAAAAGCTGTGTCATTCTTTGCCTGAGGGTAGTAAGCAGGAGAAT 763
Query 296 AAAATCAGAAATGTTTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTCC 355
|||||||| ||||| |||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct 764 AAAATCAGGAATGTATTGGTTTTGAGAGATTTGGGTGTGCCTCAAAGGTTGTTATTCTCA 823
Query 356 TTGCTCATCTCTGAT-AGC-GGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCA 413
|||||| ||||| || | | | ||| |||||||||||||| ||||||||||| ||||
Sbjct 824 TTGCTCTTCTCTAATCACCATG-TCTG-CTGTGGAAAAGAAAAGTTTGAAGAATCACTCA 881
Query 414 AGAAGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTTGTCAAAGC--TCTCCA 471
| |||||||||| ||||||||||||||| |||||| | |||||||| |||| | | ||
Sbjct 882 ACAAGGTTGTTGGGATGGGTTTTGATCCCACCACTCCAAAGTTTGTGGAAGCTTTATGCA 941
Query 472 TGGCTTTTACCAAATGAGTGACAAAACAATTGAAGAAAAAC-TCGATGTCTACAAAAGGT 530
| | ||||| | |||| ||||||| | | |||| ||||| || |||||||||| || |
Sbjct 942 TTG--TTTACGGATTGAGCGACAAAAGACTAGAAG-AAAACTTCAATGTCTACAAGAGAT 998
Query 531 TAGGCTTTTCTGTGGAA-GATGTATGGGTAA-TCTTCAAGAAGTGGCCTTG-CTCT-TTG 586
| ||||| |||| || |||||||||| || | |||||||||| ||| || || | |||
Sbjct 999 TTGGCTTAACTGT-AAACGATGTATGGG-AACTTTTCAAGAAGT-GCCCTGCCTTTCTTG 1055
Query 587 AAATTCTCAGAGGAA-AAGATAACTCAGACGA-TTGAAACCTTGAAGATGTGTGGTCTG- 643
|| ||| || ||| | ||||| |||||| | ||||| |||| |||| ||||||||||
Sbjct 1056 -GATACTCTGA-GAATAGGATAATTCAGAC-ATTTGAAGCCTTAAAGAGGTGTGGTCTGT 1112
Query 644 GACGAAAACGAAGTCCT-TCAAGTGCTGAAGAAGTATCCGCAATTCATACGTATTTCAGA 702
| |||| | || || | || |||| | |||||| |||| | || | ||||| ||||||
Sbjct 1113 G-CGAAGATGAGGTATTGTC-AGTGTTCAAGAAGAATCCACTATGCTTACGTGCTTCAGA 1170
Query 703 GCAGAAGATATTGAGTTTAATTGAAACATTTTTAGG-TGTAGGATTCAGTAGAGATGAAT 761
|||| ||||||||| | || ||||||||| |||| | |||||||||| |||||||| |
Sbjct 1171 GCAGCAGATATTGAACTCCATGGAAACATTTATAGGCT-TAGGATTCAGCAGAGATGAGT 1229
Query 762 GCGTGATGATAGCCAAGGGCTTTCCT-ATGTGCTTTGGAT-TGTCTGCAGAGACGGTGAA 819
|| ||||| | |||| || ||||| | |||| |||||| | |||||||||| ||||||
Sbjct 1230 TTGTCATGATGGTCAAGTGCCTTCCTCA-GTGCATTGGATAT-TCTGCAGAGATGGTGAA 1287
Query 820 AAAGAAGACTGAGTTTTTGGTGAAAAAGATGAATTGGCCAC-TAAAGTC-TGTGGTTTCG 877
||||||||||||||| ||||||| |||||||||||||||| ||| ||| | | ||| |
Sbjct 1288 GAAGAAGACTGAGTTTGTGGTGAAGAAGATGAATTGGCCACTTAAGGTCAT-TACTTT-G 1345
Query 878 AACCCTGC-GGGACTTGGATACAGCTTGCAGAAGAGGATTGTTCCAAGGTGTAATGTAAT 936
|||| | || ||||||||| ||| || ||||||||| ||| |||||||||||||||||
Sbjct 1346 TTCCCT-CAGGTACTTGGATATAGCATGGAGAAGAGGACTGTCCCAAGGTGTAATGTAAT 1404
Query 937 CAAAGCTCTCATGTCCAAAGGATCGCTTGGAAGTGAACTCCCTTCAGTGGCTTCTGTCTT 996
||||||||||||||||||||||| ||||||||| ||||||||| || |||| ||||| ||
Sbjct 1405 CAAAGCTCTCATGTCCAAAGGATTGCTTGGAAGCGAACTCCCTCCAATGGCGTCTGTTTT 1464
Query 997 GGCATGTACTGATCAGGCGTTCTTAAA 1023
||||||||| |||||| | ||||||||
Sbjct 1465 GGCATGTACCGATCAGACCTTCTTAAA 1491
> AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902150-22903837 FORWARD
LENGTH=1688
Length=1688
Score = 760 bits (411), Expect = 0.0
Identities = 848/1051 (81%), Gaps = 62/1051 (6%)
Strand=Plus/Plus
Query 3 ATGGGTTCACAGATTCTCAGATGTCCAA-CATCATTAAGATGTATCCACTATTGCTTATA 61
||||||||||| | |||||||| | ||| ||||||| || || |||| ||||||| |
Sbjct 370 ATGGGTTCACAAAGTCTCAGAT-TTCAAGTATCATTACTATCTACCCACGATTGCTTGCA 428
Query 62 GCAGATGCTGACAAGT-CACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCTTC 120
||||||||| || | || ||| |||||||||||||| | ||||||| |||||||||||
Sbjct 429 TTAGATGCTGAGAAATCCA-TTGCTCCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTTC 487
Query 121 AAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGAGG- 179
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||
Sbjct 488 AAGCTCTGAGCTCACTCAGATTGTTTCTACTGTTCCTAAAATCTTGGGGAAGAGAG-GGC 546
Query 180 GCAAATCTATTAGCAG-ATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGAGT 238
|||||||| || | | ||||||||||||| |||||| |||||||||||| |||||||||
Sbjct 547 ACAAATCTA-TAACTGTATACTATGATTTCGTCAAAGACATTATAGAAGCTGATAAGAGT 605
Query 239 TCCTCCAAG-TATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGC-AGGATAATA 296
| || || || ||||||||||||||| |||| ||| |||||| | | || | ||||
Sbjct 606 T-CT---AGTTACGAAAAGTTATGTCATTCTTTTCCACAGGGTA--A--CAAGAAGAATA 657
Query 297 AAATCAGAAATGT-TTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTCC 355
| ||||||||| | | | ||| ||||||||||||||||| ||||| | ||||||||| ||
Sbjct 658 AGATCAGAAATATCTCT-GTTTTGAGAGAATTGGGTGTGGCTCAGCGTTTGTTATTC-CC 715
Query 356 -TTGCTCATCTCTGATAGCGGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCAA 414
||||||||||| ||| || |||||| ||||| ||||||| |||||||||||| |||||
Sbjct 716 TTTGCTCATCTCAGATGGCCAACCTGTCTGTGGTAAAGAAAGATTTGAAGAATCTCTCAA 775
Query 415 GAAGGTTGTTGAGATGGGTTTTGATCCA-ACCACTTCGAAGTTTGTCAAAGCTCTCC-AT 472
||||||||||||||||||||||||||| | ||| | ||||| || ||||||| | |
Sbjct 776 GAAGGTTGTTGAGATGGGTTTTGATCCGGAG-ACTACAAAGTTCGTTGAAGCTCTGCGA- 833
Query 473 GGCT-TTTACCAAATGAGTGACAAAACAATTGAAGAAAAACTCGATGTCTACAAAAGGTT 531
| | |||||| ||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 834 GT-TATTTACCGTATGAGTGACAAAACAATAGAAGAAAAAGTCAATGTCTACAAAAGGTT 892
Query 532 AGGCTTTTCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTGCTCTTT-GAAAT 590
||||||| ||||| |||||||||| |||||||||||||||||||| || ||| | ||
Sbjct 893 AGGCTTTGGTGTGGCTGATGTATGGGCAATCTTCAAGAAGTGGCCTT-CTTTTTTGTCAT 951
Query 591 TCTCAGAGGAA-AAGATAACTCAGACGATTGAAACC-TTGAAGATGT-GTGGTCTGGACG 647
||||||| || ||||||||||| || |||||||| || |||| || ||||||||
Sbjct 952 ACTCAGAG-AAGAAGATAACTCATACTTTTGAAACCCTT-AAGA-GTTGTGGTCTGCTT- 1007
Query 648 AAA-ACGAAGTCCT-TCAAGTGCTGAAGAAGTATCCGCAATTCATACGTAT-TTCAGAGC 704
||| |||| ||||| | | || |||||||| |||| ||| ||| || | ||||||||
Sbjct 1008 AAACACGAGGTCCTGTTAT-TGTTGAAGAAGCATCCAAAATGCATTTGT-TCTTCAGAGC 1065
Query 705 AGAAGATAT-TGAGTTTAATTGAAACATTTTTAGGTGTAGGATTCAGTAGAGATGAATGC 763
||||||| | ||| | || |||||||| ||||| |||||||||| |||||||| |
Sbjct 1066 AGAAGAT-TGTGAACTCCATAGAAACATTCTTAGGCCTAGGATTCAGCAGAGATGAGTTT 1124
Query 764 GTGATGATAGCCAAGGGCTTTCCT-ATGTGCTTTGGATTGT-CTGCAGAGACGGTGAAAA 821
| |||||| | |||| | | |||| | |||| ||| | | | |||| ||||| ||||| |
Sbjct 1125 GCGATGATGGTCAAGCGATATCCTCA-GTGCATTG-ACTATACTGCTGAGACAGTGAAGA 1182
Query 822 AGAAGACTGAGTTT-TTGGTGAAAAAGATGAATTGGCCACTAAAGTCTGTGGTTTCGAAC 880
|||| ||||||||| ||| |||| || ||||||||||||||| || || ||||||||| |
Sbjct 1183 AGAAAACTGAGTTTATTG-TGAAGAATATGAATTGGCCACTAGAGGCTTTGGTTTCGATC 1241
Query 881 CCTGCGGG-ACTTGGATACAGCTTGCAGAAGAGGATTGTTCCAAGGTGTAATGTAATCAA 939
||| | || | ||||||||||| || ||||||| | ||| ||||||||||||||||||||
Sbjct 1242 CCT-CAGGTATTTGGATACAGCCTGGAGAAGAGAACTGTCCCAAGGTGTAATGTAATCAA 1300
Query 940 AGCTCTCATGTCCAAAGGA-TCGCTT---G--G-AAGTGAA-CTCCCTTCAGTGGCTTCT 991
| ||||||| || |||||| | | | | | ||||||| | |||| || || | |||
Sbjct 1301 AACTCTCATCTCAAAAGGACT-GATGAAAGACGGAAGTGAAGC-CCCTCCAATGTCATCT 1358
Query 992 GTCTTGGCATGTACTGATCAGGCGTTCTTAA 1022
|| || || |||| ||||||||||| ||||
Sbjct 1359 GTTTTAACAAGTACCGATCAGGCGTTTTTAA 1389
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 556 bits (301), Expect = 1e-157
Identities = 495/586 (84%), Gaps = 23/586 (4%)
Strand=Plus/Plus
Query 1 TCATGGGTTCACAGATTCTCAGATGTCCAACATCATTAAGATGTAT-CCACTATTGCTTA 59
|||||||||||| ||||||||||| ||||||||||||| || | | ||| ||||||||
Sbjct 431 TCATGGGTTCACTGATTCTCAGATCTCCAACATCATTAGGA-CTTTCCCAAGATTGCTTA 489
Query 60 TAGC-AGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCT 118
| | ||||||||| || || |||| |||||||||||||||| ||||||| | ||| |||
Sbjct 490 T-CCTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCT 548
Query 119 TCAAGCTCTGAGCTCACTC-AGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGA 177
||||||||||||||||| | || ||||||| |||||| ||||| |||||||||||| |
Sbjct 549 TCAAGCTCTGAGCTCAC-CGAGACTGTTTCTGCAGTTCCGAAAATATTGGGGAAGAGAAA 607
Query 178 GGGCAAATCTATTAGCAGATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGAG 237
|||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 608 GGGCAAATCTCTCAGCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGGATAAGAG 667
Query 238 TTCCTCCAAG-TATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAATA 296
| |||||| || ||||||||||||||| |||||||||||||||||| |||||| || |
Sbjct 668 -T--TCCAAGTTA-GAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACA 723
Query 297 AAATCAGAAATGTT-TTGGT-TCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTC 354
||||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct 724 AAATCAGAAAT-TTATTGGTGT-TGAGAGAAATGGGTGTGCCTCAGAGGTTGTTATTCTC 781
Query 355 CTTGCTCATCTCTGATAGC-GGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCA 413
||||| || || ||| || ||| ||| ||||| |||||||||||| ||||||| ||||
Sbjct 782 ATTGCTTATATCCGAT-GCCGGAGATGTTTGTGGTAAAGAAAAATTTAAAGAATCACTCA 840
Query 414 AGAAGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTT-GTCAAAGCTCTCCAT 472
|||||| ||||||||| ||||||||||||||||| | || ||| ||||||||||| |
Sbjct 841 AGAAGGCTGTTGAGATTGGTTTTGATCCAACCACCGC-AACTTTTGTCAAAGCTCTTAAC 899
Query 473 GG-CTTTTACCAAATGAGTGACAAAACAATTGAAGAA-AAACTCGATGTCTACAAAAGGT 530
| |||| || | | || |||||| ||||||| || ||| || ||| || |||||||
Sbjct 900 GTTCTTT-ACGGATTAAGCGACAAAGGAATTGAA-AATAAATTCAATGCCTGTAAAAGGT 957
Query 531 TAGGCTTTTCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCC 576
||||||| ||||||| |||||||||| ||| ||||||||||||||
Sbjct 958 TAGGCTTGGCTGTGGACGATGTATGGGCAATGTTCAAGAAGTGGCC 1003
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 523 bits (283), Expect = 1e-147
Identities = 490/586 (84%), Gaps = 29/586 (5%)
Strand=Plus/Plus
Query 1 TCATGGGTTCACAGATTCTCAGATGTCCAACATCATTA-AGATGTATCCACTA-TTGCTT 58
|||||||||||||| ||||||||| |||| |||||||| ||| || |||| | ||||||
Sbjct 506 TCATGGGTTCACAGGTTCTCAGATCTCCACCATCATTAGGGAT-TACCCAC-AGTTGCTT 563
Query 59 ATAGCAGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCT 118
|||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct 564 ATAGCAGATGCTGAGAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCT 623
Query 119 TCAAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGAG 178
||||||||||| ||||| || |||||||| |||||| |||| ||||| |||| | ||
Sbjct 624 TCAAGCTCTGAAATCACTGAGATTGTTTCTTCAGTTCCGGAAATATTGGGAAAGA-A-AG 681
Query 179 GGCA-AAT-CTATTAGCAG-ATACTATGATTTCATCAAAGTCA-TTATAGAA-GCAGATA 233
|||| || |||| ||| | |||||||||||||||||||| || || | | | ||| |
Sbjct 682 GGCACAAAACTATCAGC-GTATACTATGATTTCATCAAAGACACTT-T-GCTTG-AGA-A 736
Query 234 AGAGTTCCTCCAAGTATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATA 293
||||||| ||| | ||||||||||||||| |||||||| |||||| | | ||| |
Sbjct 737 -GAGTTCC---AAGAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAAT---CTGGAGA 789
Query 294 ATAAAATCAGAAATGTTTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATTCT 353
| || ||||||||||| | |||| | ||||||||||| ||||||| | |||||||||||
Sbjct 790 ACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTATTCT 849
Query 354 CCTTGCTCATCTCTGATAGCGGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCA 413
||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 850 CCTTGCTCATCTCCGATAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGAAACCCTCA 909
Query 414 AGAAGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTTGTCAAAGCTCTCCATG 473
|||| ||||||||||||||||||||||| ||||| || ||||||||| ||||||| || |
Sbjct 910 AGAAAGTTGTTGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGCTCTACAAG 969
Query 474 GCT-TTTACCAAATGAGTGACAAAACAATTGAAGAAAAACTCGATGTCTACAAAAGGTTA 532
| ||||| |||||| || |||||||| ||||||||| || || |||| ||||| |||
Sbjct 970 T-TATTTACAAAATGAACGAGAAAACAATCGAAGAAAAAGTCCATCTCTATAAAAGCTTA 1028
Query 533 GGCTTTTCTGTGGAAGATGTATGGGT-AA-TCTTCAAGAAGTGGCC 576
|||||| ||||| |||||||||| | || | || || ||||||||
Sbjct 1029 GGCTTTGATGTGGGAGATGTATGG-TCAAGTTTTAAA-AAGTGGCC 1072
Score = 265 bits (143), Expect = 9e-70
Identities = 223/262 (85%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 722 ATTGAAACATTT-TTAGGTGTAGGATTCAGTAGAGATGAATGCGTGATGATAGCCAAGGG 780
|||||||||||| || || |||||||||| |||||||| | | | ||| | ||||
Sbjct 1113 ATTGAAACATTTCTT-GGCCTAGGATTCAGCAGAGATGAGTTTGCCAAGATGGTCAAGCA 1171
Query 781 CTTTCCTATGTGCTTTGGATTGTCTGCAGAGACGGTGAAAAAGAAGACTGAGTTTTTGGT 840
||||||| |||| ||||||| ||| |||||||||| |||||||| ||||||||| ||||
Sbjct 1172 CTTTCCTCCGTGCATTGGATTATCTACAGAGACGGTCAAAAAGAAAACTGAGTTTCTGGT 1231
Query 841 GAAAAAGATGAATTGGCCACTAAAGTCTGTGGTTTCGAACCCTGCGGGACTTGGATACAG 900
||| ||||||||||||||||||||| |||| ||||| |||||||||| | ||||||| ||
Sbjct 1232 GAAGAAGATGAATTGGCCACTAAAGGCTGTTGTTTCAAACCCTGCGGTATTTGGATATAG 1291
Query 901 CTTGCAGAAGAGGATTGTTCCAAGGTGTAATGTAATCAAAGCTCTCATGTCCAAAGGATC 960
| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1292 CCTGGAGAAGAGGATTGTTCCAAGGGGTAACGTAATCAAAGCTCTCATGTCCAAAGGATT 1351
Query 961 GCTTG-GAAGTGAACTCCCTTC 981
| | | ||| ||||||||||||
Sbjct 1352 GAT-GAGAAATGAACTCCCTTC 1372
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 510 bits (276), Expect = 1e-143
Identities = 489/588 (83%), Gaps = 29/588 (5%)
Strand=Plus/Plus
Query 146 TCTAAAGTTCCTAAAATCTTGGGGAAGAGAGAGGG--CAAATCTATTAGCAGATACTATG 203
||| || |||||||| |||| ||||| | |||||| |||| || | ||| ||||||||
Sbjct 440 TCTCAA-TTCCTAAACTCTT-GGGAA-AAAGAGGGCACAAAACTCTCAGCTTATACTATG 496
Query 204 ATTTCATCAAAGTCA-TTATAGAAGCAGATAAGAGTTCCTCCAAGTATGAAAAGTTATGT 262
||||| | |||| | || |||||||||||||||||| || |||||||||| ||||||
Sbjct 497 ATTTCGTTAAAGAGAGTT-TAGAAGCAGATAAGAGTT-CT--AAGTATGAAACTTTATGT 552
Query 263 CATG-CTTTGCCAGAGGGTAGTAGGCAGGATAATAA-AATCAGAAATGTTTTGGTTCTGA 320
|| | |||| ||| |||||| | | ||| || || || |||||||| | |||| | |
Sbjct 553 CA-GTCTTTTCCACAGGGTA--A-TCTGGAGAACAAGAA-GAGAAATGTATCGGTTTTAA 607
Query 321 GAGAATTGGGTGTGCCTCAGAGGTTGTTATTCTCCTTGCTCATCTCTGATAG-CGGACCT 379
|||||||||| ||||||| | |||||||||| ||||||| || || | | | | ||||
Sbjct 608 GAGAATTGGGAATGCCTCACAAGTTGTTATTCCCCTTGCTTATATCCGTTGGTC-AACCT 666
Query 380 GTATGTGGAAAAGAAAAATTTGAAGA-ATCCCTCAAGAAGGTTGTTGAGATGGGTTTTGA 438
|||||||||||||| | |||| || | || ||||||||||| |||||||||||||||||
Sbjct 667 GTATGTGGAAAAGATAGATTT-AATACGTCTCTCAAGAAGGTAGTTGAGATGGGTTTTGA 725
Query 439 TCCAACCACTTCGAAGTTTGTCAAAGCTCTCCATGGCTTTTACCAAATGAGTGACAAAAC 498
||| ||||| | |||||||||||||||||||| | | |||| |||||| ||||||||
Sbjct 726 TCCGACCACCGCAAAGTTTGTCAAAGCTCTCCACGTATCTTACGAAATGAACGACAAAAC 785
Query 499 AATTGAAGAAAAACTCGATGTCTACAAAAGGTTAGGCTTTTCTGTGGAAGATGTATGGGT 558
||| ||||||||| || |||||||||||| |||||||||| |||||||||||||||||||
Sbjct 786 AATAGAAGAAAAAGTCAATGTCTACAAAATGTTAGGCTTTGCTGTGGAAGATGTATGGGT 845
Query 559 AATCTTCAAGAAGTGGCCTTGCTCTTTGAAATTCTCAGAGGAAAAGATAACTCAGACGAT 618
|||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||
Sbjct 846 AATCTTCAAGAAGTGGCCATACTCTTTGAAATACTCAGAGGAAAAGATTACTCAGACGAT 905
Query 619 TGAAACCTTGAAGATGTGTGGTCTGGACGAAAACGAAGTCCTTCAAGTGCTGAAGAAGTA 678
|||||||||||||||||| ||||| |||| | ||||||||||| ||||||||||
Sbjct 906 TGAAACCTTGAAGATGTGCGGTCT--ACGA----G--GTCCTTCAAGTTTTGAAGAAGTA 957
Query 679 TCCGCAATTCATACGTATTTCAGAGCAGAAGATATTGAGTTTAATTGA 726
||| ||||||||||||| || |||||||| ||||||||| ||||||||
Sbjct 958 TCCTCAATTCATACGTACTTGAGAGCAGAGGATATTGAGCTTAATTGA 1005
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 496 bits (268), Expect = 3e-139
Identities = 494/597 (83%), Gaps = 39/597 (7%)
Strand=Plus/Plus
Query 3 ATGGGTTCACAGATTCTCAGATGTCCAACATCATTAAGATGT-ATCCACTATTGCTTATA 61
|||||||||| ||||||||||| |||| |||||| | || || || || | ||||||||
Sbjct 380 ATGGGTTCACTGATTCTCAGATCTCCAGCATCATCAGGA-GTGATTCAAGAGTGCTTATA 438
Query 62 G-C-A-GATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCT 118
| | | ||||| ||| | || |||||| | |||||||||||||||||||| |||||||||
Sbjct 439 GACAATGATGC-GAC-A-TCCCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCT 495
Query 119 TCAAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGAG 178
|||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||
Sbjct 496 TCAAGCTCTGAGCTCACTGAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAG 555
Query 179 GGCAAATCTATTAGCAGATACTATGATTTCATCAAAGTCATTATAGAAGCAGATAAGAGT 238
||||||||| | |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 556 GGCAAATCTCTCAGCAGATATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGT 615
Query 239 TCCTCCAAGTATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAATAAA 298
||| |||||||||||| ||| |||| ||||| || |||||| | || |||
Sbjct 616 TCC---AAGTATGAAAAGATATCTCATTCTTTGGCACAGGGTA--A--CAAGAT------ 662
Query 299 ATCAGAAATGTTTTGGTTCTGAGAGAATTGGGTGTGCCTCAGAGGTTGTTATT-CTCCTT 357
||||||| | |||||| |||||||| | || |||||||| | | |||| | || ||
Sbjct 663 --CAGAAATATCTTGGTTTTGAGAGAACTAGGCGTGCCTCAAAAGCGGTTACTGCTT-TT 719
Query 358 GCTCATCTCTGA-TAGCGGACCTGTATGTGGAAAAGAAAAATTTGAAGAATCCCTCAAGA 416
||||||||| | | || | ||||| |||||||||||||| ||||| | ||| |||||||
Sbjct 720 GCTCATCTCCAAATCGCAG-CCTGTTTGTGGAAAAGAAAAGTTTGATGCATCACTCAAGA 778
Query 417 AGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAA-GTTTGT-CAAAGCTCTCCATG- 473
|||| |||||||||||||||||||||||||| || || |||||| || ||| | |||
Sbjct 779 AGGTAGTTGAGATGGGTTTTGATCCAACCACCTC-AACGTTTGTGCAC-GCTTTGCATAT 836
Query 474 GCTTTTACCAAATGAGTGACAAAACAATTGAAGAAAAACTC-GATGTCTACAAAAG-GTT 531
||||| |||||||||| |||||||| |||||||||||| || || ||||| | ||| ||
Sbjct 837 GCTTT-ACCAAATGAGCGACAAAACGATTGAAGAAAAAATCCGA-GTCTATAGAAGTGT- 893
Query 532 AGGCTTT-TCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCCTTGCTCTTTGA 587
||| ||| ||||| || |||||||||| ||| |||||||||||||| |||||||||
Sbjct 894 AGG-TTTCTCTGTTGATGATGTATGGGCAATGTTCAAGAAGTGGCCACGCTCTTTGA 949
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 451 bits (244), Expect = 6e-126
Identities = 485/594 (82%), Gaps = 45/594 (8%)
Strand=Plus/Plus
Query 1 TCATGGGTTCACAGATTCTCAGATGTCCAACATCATTA-AGATGTATCCACTATTGCTTA 59
|||||||||||| ||||||||||| |||| |||| ||| ||| ||||||| |||||||
Sbjct 396 TCATGGGTTCACTGATTCTCAGATCTCCACCATCGTTACGGAT-TATCCACAATTGCTTG 454
Query 60 TAGCAGATGCTGACAAGTCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCAAGAGGAGCTT 119
|||| |||||||| || ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 455 TAGCTGATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTT 514
Query 120 CAAGCTCTGAGCTCACTCAGGTTGTTTCTAAAGTTCCTAAAATCTTGGGGAAGAGAGAGG 179
||||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||||||
Sbjct 515 CAAGCTCTGAGCTCACTGAGATTGTTTCTACAGTTCCTAAAATCTT-GGGAA-AGAGAGG 572
Query 180 --GCAAATCTATTAGCAG-ATACTATGATTTCATCAAAGTCA-TTATAGAAGC-AGATAA 234
|||| |||| ||| | || ||||||||||||||||| | || | | | |||||
Sbjct 573 CCACAAAACTATCAGC-GTATTCTATGATTTCATCAAAGAAACTT-T---A-CTTGATAA 626
Query 235 GAGTTCCTCCAAGTATGAAAAGTTATGTCATGCTTTGCCAGAGGGTAGTAGGCAGGATAA 294
||| | ||||||| ||||||| |||||| |||| ||| |||||| | | ||| ||
Sbjct 627 GAG-T--TCCAAGTCCGAAAAGTCATGTCAACCTTTTCCACAGGGTA--A-TCTGGAGAA 680
Query 295 TAAAATCAGAAATGTT-T-TGGTTCTGAGAGAATTGGGTG-TGCCTCAGAGGTTGTTATT 351
|| ||||||||| || | | ||| ||||||||||||| | ||||||| | |||||||||
Sbjct 681 CAAGATCAGAAAT-TTATCT-GTTTTGAGAGAATTGGG-GATGCCTCACAAGTTGTTATT 737
Query 352 CTCCTTGCTCATCTC-TGATAG-CGGACCTGTATGT-GGAAAAGAAAAATTTGAAGAATC 408
| ||||||||||||| || | | || |||||| | | || ||||||||||||||||||||
Sbjct 738 CCCCTTGCTCATCTCTTG-T-GACGTACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATC 794
Query 409 CCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACTTCGAAGTTTGTCAAAGCTCT 468
||||||||| |||||||||||||||||||||||| |||| || |||||||| ||||| |
Sbjct 795 CCTCAAGAAAGTTGTTGAGATGGGTTTTGATCCATCCACCTCAAAGTTTGTGGAAGCTTT 854
Query 469 CCATG-GCTT-TTACCAA-AT-GAGTGACAAAA-CAATTGAAGAAAAACTCGATGTC-TA 522
|| | || || | || || ||| ||||||| || | ||||| ||| || ||| | ||
Sbjct 855 G--TGCG-TTGTT-CAAAGATTGAGCGACAAAAACA-TAGAAGATAAAGTCAATG-CGTA 908
Query 523 CAAAAGGTTAGGCTTTTCTGTGGAAGATGTATGGGTAATCTTCAAGAAGTGGCC 576
||||||||||||||| ||||||| |||||||| | | ||||||| ||||||
Sbjct 909 TAAAAGGTTAGGCTTTGATGTGGAATATGTATGGACAGTGTTCAAGAGGTGGCC 962
> AT3G17400.1 | Symbols: | F-box family protein | chr3:5954887-5955444
FORWARD LENGTH=558
Length=558
Score = 67.6 bits (36), Expect = 3e-10
Identities = 58/68 (85%), Gaps = 4/68 (6%)
Strand=Plus/Plus
Query 1065 TTCCGATGACATCTCTGAGAGCAATAC-GTTCTACTTGCAAAAAGTGGAACACTTTATCC 1123
||||| ||||||||||||||| | | | |||||||||||||||||||||||||||||
Sbjct 56 TTCCGGTGACATCTCTGAGAGGGGT-CAGAGCTACTTGCAAAAAGTGGAACACTTTATCC 114
Query 1124 CAAA-ATC 1130
||| |||
Sbjct 115 -AAAGATC 121
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58734637650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5