BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924811
Length=2348
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61970.1 | Symbols: | Mitochondrial transcription terminati... 1345 0.0
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 1035 0.0
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 800 0.0
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 656 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 645 0.0
AT1G61960.1 | Symbols: | Mitochondrial transcription terminati... 608 7e-173
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 479 6e-134
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 412 6e-114
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 398 2e-109
AT1G62055.1 | Symbols: | pseudogene, hypothetical protein | ch... 202 1e-50
> AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904486-22907630 FORWARD
LENGTH=2848
Length=2848
Score = 1345 bits (728), Expect = 0.0
Identities = 965/1078 (90%), Gaps = 21/1078 (2%)
Strand=Plus/Plus
Query 1180 AGAAGGTCAGT-CGAGTTGCAGAAATGGCGTAACTTGAGAGTTTCAGTGCCAAATGCATC 1238
||||||| || | |||||||||||||| ||||||| || ||||||||| ||| |||||
Sbjct 252 AGAAGGTTGGTAC-AGTTGCAGAAATGGTGTAACTTTAGTCTTTCAGTGCAAAAGGCATC 310
Query 1239 TTCTTTTTTCAATTTGTTTTCCTTTGCTACTACTGCTGCACATTTGAGTCCTAGAGTTGG 1298
|| | |||||| || |||| |||| | ||||||| ||||||||||||||||||
Sbjct 311 ACCTACATCCAATTTCTTCTCCTCTGCT--T-CTGCTGCGTGTTTGAGTCCTAGAGTTGG 367
Query 1299 TCGAAAAGGAAAGGACTTTACTTTCTCTTACCTCGTTGATTCATTAGG-TTTACCTA-AA 1356
|||||||||||| ||||||| |||||||||| ||||||||||| || || ||| | ||
Sbjct 368 TCGAAAAGGAAACAACTTTACAGTCTCTTACCTTGTTGATTCATTGGGCTTAACC-ACAA 426
Query 1357 AAGCTCGCAGAATCGATTTCAAGGAAAGTCAGCTTCGAGGACAAGGGCAATCCTGATTCT 1416
|| ||||| ||||| |||||| |||| || ||||||||||||||| |||||||||||||
Sbjct 427 AA-CTCGCTGAATCCATTTCACGGAAGGTTAGCTTCGAGGACAAGAACAATCCTGATTCT 485
Query 1417 GTTCTGAGTCTTTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGCATGATT-GG 1475
||||||| |||||| | | |||| |||||||| | |||||||||||| | ||| ||| ||
Sbjct 486 GTTCTGAATCTTTTGACAAGTCATGGGTTCACAGGTTCTCAGATCTCCACCATCATTAGG 545
Query 1476 GATTTACCCACGA-TTGCTTTTA-CTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAG 1533
|| |||||||| | |||||| || | ||||||||||||||| |||| |||||||||||||
Sbjct 546 GA-TTACCCAC-AGTTGCTTATAGC-AGATGCTGAGAAATCACTTGGTCCCAAGCTTCAG 602
Query 1534 TTTTTGCAGTCCAGAGAAGCGTCAAGCTTTGAGCTCACTCAGATTGTTTC-AAAGGTTCC 1592
||||||||||| |||| ||| ||||||| ||| ||||| |||||||||| | |||||
Sbjct 603 TTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAAATCACTGAGATTGTTTCTTCA-GTTCC 661
Query 1593 GGAAATATTAGGAAAGAAAGGGGACAAAACTATCAGCGTATACTATGATTTCATCAAAGA 1652
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 662 GGAAATATTGGGAAAGAAAGGGCACAAAACTATCAGCGTATACTATGATTTCATCAAAGA 721
Query 1653 CACTTTACATGATAAGAGTTCCAAGTACGAAAAGTTGTGTCATTCTTTTCCACCGGGTAA 1712
|||||| | ||| |||||||||||| |||||||||| ||||||||||| |||| ||||||
Sbjct 722 CACTTTGCTTGAGAAGAGTTCCAAGAACGAAAAGTTATGTCATTCTTTGCCACAGGGTAA 781
Query 1713 TCTAGAGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTT 1772
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 782 TCTGGAGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTT 841
Query 1773 GTTATTCTCCTTGCTCATCTCCGATAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGG 1832
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 GTTATTCTCCTTGCTCATCTCCGATAGCCAACCTGTATGTGGAAAAGAAAAATTTGAAGA 901
Query 1833 AACCCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACCGGAAAGTTTGTCGAAGC 1892
|||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 902 AACCCTCAAGAAAGTTGTTGAGATGGGTTTTGATCCTACCACCTCAAAGTTTGTCGAAGC 961
Query 1893 TCTA-AACGTTATTTACAAAATGAACGAGAAAACAATCGAAGAAAGATTCAATCTCTATA 1951
|||| || ||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct 962 TCTACAA-GTTATTTACAAAATGAACGAGAAAACAATCGAAGAAAAAGTCCATCTCTATA 1020
Query 1952 AAAGCTTAGGCTTTGATGCGGGAGATGTATGGTCAAGTTTCAAAAAGTGGCCAATCTCTC 2011
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1021 AAAGCTTAGGCTTTGATGTGGGAGATGTATGGTCAAGTTTTAAAAAGTGGCCAATCTCGC 1080
Query 2012 TGAGAGTAACGGAGACGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCA 2071
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 TGAGAGTATCGGAGAAGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCA 1140
Query 2072 GCAGAGATGAGTTTACGAAGATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCTCCAG 2131
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1141 GCAGAGATGAGTTTGCCAAGATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCTACAG 1200
Query 2132 AGATGGTCAAAAAGAAAACTGAGTT-CTTGGTGAAGAAGATGAATTGGCCACTAAAGGCT 2190
||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1201 AGACGGTCAAAAAGAAAACTGAGTTTCT-GGTGAAGAAGATGAATTGGCCACTAAAGGCT 1259
Query 2191 CTGGTTTCAAACCCTGCAGCACTAGGATACAGCCTGGAGAAGAGGATCGTCCCAAGGG 2248
| |||||||||||||| | | | ||||| ||||||||||||||||| || |||||||
Sbjct 1260 GTTGTTTCAAACCCTGCGGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGGG 1317
Score = 730 bits (395), Expect = 0.0
Identities = 750/914 (82%), Gaps = 53/914 (6%)
Strand=Plus/Plus
Query 219 CGAGGGCAAGGCA-AATCCTGAGTCAGTTCGGAGTCTTTTGACTAGTCATGGGTTCACAG 277
||||| ||| | | |||||||| || |||| || ||||||||| ||||||||||||||||
Sbjct 461 CGAGGACAA-GAACAATCCTGATTCTGTTCTGAATCTTTTGACAAGTCATGGGTTCACAG 519
Query 278 ATTCTCAGATCTCCAGCATCATTA-CGATTTATCCACGA-TTGTTTTTATTAGATGCTAA 335
|||||||||||||| |||||||| || ||| |||| | ||| || || ||||||| |
Sbjct 520 GTTCTCAGATCTCCACCATCATTAGGGA-TTACCCAC-AGTTGCTTATAGCAGATGCTGA 577
Query 336 GAAATCACTTGCTCCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCT 395
||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct 578 GAAATCACTTGGTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAAAT 637
Query 396 CACCGAGATTGTATC-AAAGGTTCCGGAAATATTGGCAAAGAAAGGAG-ACAAAACGCTA 453
||| |||||||| || | |||||||||||||||| ||||||||| | ||||||| |
Sbjct 638 CACTGAGATTGTTTCTTCA-GTTCCGGAAATATTGGGAAAGAAAGG-GCACAAAACTATC 695
Query 454 AGCAG-ATACTATGATTTCGTCAAAGTCATTGTTGAAGC-AGATAAGAGTTCCAATTACG 511
||| | ||||||||||||| |||||| || | || || || ||||||||||| |||
Sbjct 696 AGC-GTATACTATGATTTCATCAAAGACACT-TT---GCTTGAGAAGAGTTCCAAGAACG 750
Query 512 ACAAGTTATGTCATTCTTTGCCTGTGGGTAATCTAGAGAATAAAATCCGGAATATATCGG 571
| |||||||||||||||||||| ||||||||| ||||| || ||| | ||| ||||||
Sbjct 751 AAAAGTTATGTCATTCTTTGCCACAGGGTAATCTGGAGAACAAGATCAGAAATGTATCGG 810
Query 572 TTTTAAGAGAACTCGGTGTGCCTCAGAGGTTGTTATTC-CCTTTGCTCATCT-CTAGTGG 629
||||||||||| | || ||||||| | |||||||||| || |||||||||| | | | |
Sbjct 811 TTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTATTCTCC-TTGCTCATCTCCGA-TAG 868
Query 630 GGGACCTGTCAATG-GG-AAAGAAAGGTTTGGAGAATCCATTAAG-AAGCTTGTTGAGAT 686
|||||| ||| || ||||||| |||| |||| || | ||| ||| ||||||||||
Sbjct 869 CCAACCTGT--ATGTGGAAAAGAAAAATTTGAAGAAACCCTCAAGAAAG-TTGTTGAGAT 925
Query 687 GGGTTTTGATCCGACCA-CTACAAAGTTTGTTAAAGCTCTGCGCA-TT-GTT-CAAGGAT 742
|||||||||||| |||| || |||||||||| ||||||| | | || || ||| ||
Sbjct 926 GGGTTTTGATCCTACCACCT-CAAAGTTTGTCGAAGCTCTAC-AAGTTATTTACAA-AAT 982
Query 743 TAAGCGCA-AAAACAATAGAAGAAAAAG-CCAATCTCTATAAAAGTTTAGGCTTTGA--T 798
|| || | |||||||| |||||||||| || ||||||||||||| ||||||||||| |
Sbjct 983 GAA-CG-AGAAAACAATCGAAGAAAAAGTCC-ATCTCTATAAAAGCTTAGGCTTTGATGT 1039
Query 799 ----GATGTATGG-GAAATTTTCAACAAA-TATCCAATCTTTCTG-GCGCTCTCTGAGAA 851
||||||||| || |||| || ||| | ||||||| ||| | | | || |||||
Sbjct 1040 GGGAGATGTATGGTCAAGTTTT-AA-AAAGTGGCCAATCTCGCTGAGAG-TATCGGAGAA 1096
Query 852 GAACATATTGAACTCTGTAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGAATTTGC 911
||| || ||| |||| | ||||||||||| || |||||||||||||||||||| |||||
Sbjct 1097 GAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCAGCAGAGATGAGTTTGC 1156
Query 912 AAATATGGTCAAG-AGCTTTCCTCAGGGCATTGGATTATCCGCAGAGACGGTTAAAAAGA 970
|| ||||||||| | |||||||| | ||||||||||||| |||||||||| |||||||
Sbjct 1157 CAAGATGGTCAAGCA-CTTTCCTCCGTGCATTGGATTATCTACAGAGACGGTCAAAAAGA 1215
Query 971 AGACCGAATTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCCCTGGTTTCAAACCCTG 1030
| || || ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 1216 AAACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTTGTTTCAAACCCTG 1275
Query 1031 CGGTACTTGGATACAACATGGAGAAGAGGATTGTACCAAGGTGTAACGTAATTAAAGCTC 1090
||||| ||||||| | | |||||||||||||||| |||||| |||||||||| |||||||
Sbjct 1276 CGGTATTTGGATATAGCCTGGAGAAGAGGATTGTTCCAAGGGGTAACGTAATCAAAGCTC 1335
Query 1091 TCATGTCCAAAGGA 1104
||||||||||||||
Sbjct 1336 TCATGTCCAAAGGA 1349
Score = 104 bits (56), Expect = 4e-21
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 22 ATGTGTTCTCTGATACTCCATGGAAGAAGGTTGGTCCAGTTACAGAAATGGTGTCA-TTT 80
|||| | |||||||||||||||||||||||||||| ||||| |||||||||||| | |||
Sbjct 228 ATGTATGCTCTGATACTCCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGTGTAACTTT 287
Query 81 GAGTTTTTCAGTGCAAAAGGC 101
||| ||||||||||||||||
Sbjct 288 -AGTCTTTCAGTGCAAAAGGC 307
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 1035 bits (560), Expect = 0.0
Identities = 913/1079 (85%), Gaps = 41/1079 (4%)
Strand=Plus/Plus
Query 1189 GTCGAGTTGCAGAAATGGCGTAACTTGAGAGTTTCAGTGCCAAATGCATCTTCTTTTTTC 1248
|||||||| |||||||||||| | |||||||||| ||||| ||| || ||| |||| | |
Sbjct 151 GTCGAGTTACAGAAATGGCGTCATTTGAGAGTTTTAGTGCAAAAGGCGTCTCCTTTGTCC 210
Query 1249 AATTTGTTTTCCTTTGCTACTACTGCTGCACATTTGAGTCCTAGAGTTGGTCGAAAAGGA 1308
|||| || |||| |||| | ||||||| | |||||||||||||||||||||||||||
Sbjct 211 AATTCCTTCTCCTCTGCT--T-CTGCTGCGCGTTTGAGTCCTAGAGTTGGTCGAAAAGGT 267
Query 1309 AAGGA-CTTTACTTTCTCTTACCTCGTTGATTCATTAGGTTTACCTAAAAAGCTCGCAGA 1367
|| || |||||| |||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 268 AA-GAGCTTTACAGTCTCTTACCTCGTTGATTCATTGGGTTTACCCAAAAAGCTCGCTGA 326
Query 1368 ATCGATTTCAAGGAAAGTCAGCTTCGAGGACAAGGGCAATCCTGATTCTGTTCTGAGTCT 1427
|||| | |||||||| || |||||||||||||||| ||| ||||| |||||||||| |||
Sbjct 327 ATCGGTCTCAAGGAAGGTTAGCTTCGAGGACAAGGACAACCCTGACTCTGTTCTGAATCT 386
Query 1428 TTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGCAT-GATT-GGGATTTACCCA 1485
||| ||| |||| ||||||||||||||||||||||| | ||| | || ||| ||| |||
Sbjct 387 TTTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCCACCATCG-TTACGGA-TTATCCA 444
Query 1486 CGATTGCTTTTA-CTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTTTGCAGTC 1544
| ||||||| || || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 445 CAATTGCTTGTAGCT-GATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTC 503
Query 1545 CAGAGAAGCGTCAAGCTTTGAGCTCACTCAGATTGTTTCAA-AGGTTCCGGAAATATTAG 1603
|||| ||| ||||||| |||||||||| |||||||||| | || |||| |||| || |
Sbjct 504 TAGAGGAGCTTCAAGCTCTGAGCTCACTGAGATTGTTTCTACAG-TTCCTAAAATCTTGG 562
Query 1604 GAAAGAAAGGGGACAAAACTATCAGCGTATACTATGATTTCATCAAAGACACTTTACATG 1663
|||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct 563 GAAAGAGAGGCCACAAAACTATCAGCGTATTCTATGATTTCATCAAAGAAACTTTACTTG 622
Query 1664 ATAAGAGTTCCAAGTACGAAAAGTTGTGTCATTCTTTTCCACCGGGTAATCTAGAGAACA 1723
||||||||||||||| |||||||| ||||| ||||||||| ||||||||| |||||||
Sbjct 623 ATAAGAGTTCCAAGTCCGAAAAGTCATGTCAACCTTTTCCACAGGGTAATCTGGAGAACA 682
Query 1724 AGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTATTCTCCT 1783
||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||| |||
Sbjct 683 AGATCAGAAATTTATCTGTTTTGAGAGAATTGGGGATGCCTCACAAGTTGTTATTCCCCT 742
Query 1784 TGCTCATCTCC-GATAGCCA-ACCTGTATGT-GGAAAAGAAAAATTTGAAGGAA-CCCTC 1839
|||||||||| | | | | |||||| | | || |||||||||||||||| || |||||
Sbjct 743 TGCTCATCTCTTG-T-GACGTACCTGTCT-TCGGTAAAGAAAAATTTGAAG-AATCCCTC 798
Query 1840 AAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACCGGAAAGTTTGTCGAAGCTCTAAAC 1899
||||| |||||||||||||||||||||||| ||||| ||||||||| |||||| | |
Sbjct 799 AAGAAAGTTGTTGAGATGGGTTTTGATCCATCCACCTCAAAGTTTGTGGAAGCTTTGTGC 858
Query 1900 GTTATTTACAAA-AT-GAACGAGAAAA-CAATCGAAGA-AAGATTCAAT-CTCTATAAAA 1954
||| || |||| || || ||| |||| || | ||||| || | ||||| | |||||||
Sbjct 859 GTTGTT--CAAAGATTGAGCGACAAAAACA-TAGAAGATAA-AGTCAATGCG-TATAAAA 913
Query 1955 GCTTAGGCTTTGATGCGGGAGATGTATGGTCAAGT-TTCAAAAAGTGGCCAATCTCTCTG 2013
| ||||||||||||| || | |||||||| || || ||||| | |||||||| || ||||
Sbjct 914 GGTTAGGCTTTGATGTGGAATATGTATGGACA-GTGTTCAAGAGGTGGCCAAACTTTCTG 972
Query 2014 AGAGTAA-CGGAGACGAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCAG 2072
| | | |||||| |||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct 973 ACAC-ACTCGGAGAAGAAGATATTGAACACCATTGAAACATTTCTAGGCCTAGGGTTCAG 1031
Query 2073 CAGAGATGAGTTTA-CGAAGATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCTC-CA 2130
|||||||||||||| || | | | |||| |||||||| | ||||||||||||| | |
Sbjct 1032 CAGAGATGAGTTTAGCGT-GTTAATTAAGCGCTTTCCTCAGGGCATTGGATTATC-CGCG 1089
Query 2131 GAGATGGTCAAAAAGAAAACTGAGTTCTTGGTGAAGAAGATGAATTGGCCACTAAAGGCT 2190
|||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1090 GAGATGGTTAAAAAGAAGACTGAGTTTTTGGTAAAGAAGATGAATTGGCCACTAAAGGCT 1149
Query 2191 CTGGTTTCAAACCCTGCAGCACTAGGATACAGCCTGGAGAAGAGGA-TCGTCCCAAGGG 2248
|| |||||||||||||| | || ||||||||||| |||||||||| | ||||||||||
Sbjct 1150 CTTGTTTCAAACCCTGCGGTGCTTGGATACAGCCTAGAGAAGAGGACT-GTCCCAAGGG 1207
Score = 719 bits (389), Expect = 0.0
Identities = 747/916 (82%), Gaps = 39/916 (4%)
Strand=Plus/Plus
Query 219 CGAGGGCAAGGCA-AATCCTGAGTCAGTTCGGAGTCTTTTGACTAGTCATGGGTTCACAG 277
||||| ||||| | || ||||| || |||| || |||||||| |||||||||||||| |
Sbjct 351 CGAGGACAAGG-ACAACCCTGACTCTGTTCTGAATCTTTTGAGAAGTCATGGGTTCACTG 409
Query 278 ATTCTCAGATCTCCAGCATCATTAC-GATTTATCCACGATTGTTTTTA-TTAGATGCTAA 335
||||||||||||||| |||| |||| || |||||||| |||| || || | |||||| |
Sbjct 410 ATTCTCAGATCTCCACCATCGTTACGGA-TTATCCACAATTGCTTGTAGCT-GATGCTGA 467
Query 336 GAAATCACTTGCTCCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCT 395
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 468 GAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCT 527
Query 396 CACCGAGATTGTATC-AAAGGTTCCGGAAATATTGGCAAAGAAAGGAGACAAAACGCTAA 454
||| |||||||| || | | ||||| |||| |||| ||||| ||| ||||||| | |
Sbjct 528 CACTGAGATTGTTTCTACA-GTTCCTAAAATCTTGGGAAAGAGAGGCCACAAAACTATCA 586
Query 455 GCAG-ATACTATGATTTCGTCAAAGTCATTGTTGAAGC-AGATAAGAGTTCCAATTACGA 512
|| | || |||||||||| |||||| | | || | | |||||||||||||| | |||
Sbjct 587 GC-GTATTCTATGATTTCATCAAAGAAACT-TT--A-CTTGATAAGAGTTCCAAGTCCGA 641
Query 513 CAAGTTATGTCATTCTTTGCCTGTGGGTAATCTAGAGAATAAAATCCGGAATATATCGGT 572
|||| |||||| |||| || ||||||||| ||||| || ||| | ||| |||| ||
Sbjct 642 AAAGTCATGTCAACCTTTTCCACAGGGTAATCTGGAGAACAAGATCAGAAATTTATCTGT 701
Query 573 TTTAAGAGAACTCGGTG-TGCCTCAGAGGTTGTTATTCCCTTTGCTCATCTCTAGTGGGG 631
||| |||||| | || | ||||||| | |||||||||||| |||||||||||| ||| |
Sbjct 702 TTTGAGAGAA-TTGGGGATGCCTCACAAGTTGTTATTCCCCTTGCTCATCTCTTGTGACG 760
Query 632 GACCTGTCAAT-GGGAAAGAAAGGTTTGGAGAATCCATTAAG-AAGCTTGTTGAGATGGG 689
||||||| | || ||||||| |||| ||||||| | ||| ||| |||||||||||||
Sbjct 761 TACCTGTC-TTCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAG-TTGTTGAGATGGG 818
Query 690 TTTTGATCCGA-CCA-CTACAAAGTTTGTTAAAGCTCTGCGCATTGTTCAAGGATTAAGC 747
||||||||| | ||| || |||||||||| ||||| || || |||||||| |||| |||
Sbjct 819 TTTTGATCC-ATCCACCT-CAAAGTTTGTGGAAGCTTTGTGCGTTGTTCAAAGATTGAGC 876
Query 748 G-CAAAAACAATAGAAGAAAAAGCCAATCTC-TATAAAAGTTTAGGCTTTGA--T-G--- 799
| ||||||| |||||||| |||| |||| | |||||||| ||||||||||| | |
Sbjct 877 GACAAAAAC-ATAGAAGATAAAGTCAAT-GCGTATAAAAGGTTAGGCTTTGATGTGGAAT 934
Query 800 ATGTATGGGA-AATTTTCAACAAATATCCAATCTTTCTGGCGCTCTCTGAGAAGAACATA 858
|||||| ||| | | ||||| | | |||| ||||||| | | ||| |||||||| |||
Sbjct 935 ATGTAT-GGACAGTGTTCAAGAGGTGGCCAAACTTTCTGACACACTCGGAGAAGAAGATA 993
Query 859 TTGAACTCTGTAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGAATTT-GCAAATAT 917
|||||| | | |||||||||||||| ||||| |||||||||||||| ||| || | |
Sbjct 994 TTGAACACCATTGAAACATTTCTAGGCCTAGGGTTCAGCAGAGATGAGTTTAGCGTGT-T 1052
Query 918 GGTCAAGAGCTTTCCTCAGGGCATTGGATTATCCGCAGAGACGGTTAAAAAGAAGACCGA 977
| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||| ||
Sbjct 1053 AATTAAGCGCTTTCCTCAGGGCATTGGATTATCCGCGGAGATGGTTAAAAAGAAGACTGA 1112
Query 978 ATTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCCCTGGTTTCAAACCCTGCGGTACT 1037
||| |||| |||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 1113 GTTTTTGGTAAAGAAGATGAATTGGCCACTAAAGGCTCTTGTTTCAAACCCTGCGGTGCT 1172
Query 1038 TGGATACAACATGGAGAAGAGGATTGTACCAAGGTGTAACGTAATTAAAGCTCTCATGTC 1097
|||||||| | | |||||||||| ||| |||||| |||||||| || |||||||||| ||
Sbjct 1173 TGGATACAGCCTAGAGAAGAGGACTGTCCCAAGGGGTAACGTAGTTCAAGCTCTCATCTC 1232
Query 1098 CAAAGGACTGCTCGGA 1113
||| ||| || |||||
Sbjct 1233 CAAGGGATTGATCGGA 1248
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 800 bits (433), Expect = 0.0
Identities = 892/1103 (81%), Gaps = 73/1103 (7%)
Strand=Plus/Plus
Query 1189 GTCGAGTTGCAGAAATGGCGTAACTTGAGAGTTTCAGTG---C-----C-AAATGCATCT 1239
||| |||||||||||||||| | ||||| ||||||||| | | ||||| |||
Sbjct 174 GTCCAGTTGCAGAAATGGCGCCATTTGAGGGTTTCAGTGAATCTTTTTCAAAATGGATCA 233
Query 1240 TCTTTTTTCAATTTGTTTTCCT-TTGCTACTACTGCTGCACATTTGAGTC-CTAGAGTTG 1297
|||||| |||| || |||| | || ||| |||||| || |||| | | |||| ||
Sbjct 234 GCTTTTTCCAATACCTTCTCCTCCT-CTGCTATTGCTGCTGATGTGAG-CTCAAGAGATG 291
Query 1298 GTCGAAAAGGAAAGGACTTTAC-TTTCTCTTACCTCGTTGATTCATTAGGTTTACCTA-A 1355
|||||||||| | ||||||| || ||||||||||||||||||||||||||| ||| |
Sbjct 292 GTCGAAAAGGTCACAACTTTACAGTT-TCTTACCTCGTTGATTCATTAGGTTTAGCTACA 350
Query 1356 AAAGCTCGCAGAATCGATTTCAAGGAAAGTCAGCTTCGAGGACAAGGGCAATCCTGATTC 1415
|||| |||| |||||||| || | ||||||||| ||||| |||||||||| ||||||||
Sbjct 351 AAAG-TCGCTGAATCGATCTCCATGAAAGTCAGTTTCGATAACAAGGGCAACCCTGATTC 409
Query 1416 TGTTCTGAGTCTTTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGCATGATTGG 1475
||||||||||||||| ||| |||| ||||||||||||||||||||||| | ||| ||| |
Sbjct 410 TGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCCAACATCATTAG 469
Query 1476 GA-TTTACCCACGATTGCTTTTACTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGT 1534
|| ||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 470 GACTTT-CCCAAGATTGCTTATCCTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGT 528
Query 1535 TTTTGCAGTCCAGAGAAGCGTCAAGCTTTGAGCTCACTC-AGATTGTTTCAA-AGGTTCC 1592
|| ||||||||| || || ||||||| ||||||||| | ||| |||||| || ||||
Sbjct 529 TTCTGCAGTCCATAGGTGCTTCAAGCTCTGAGCTCAC-CGAGACTGTTTCTGCAG-TTCC 586
Query 1593 GGAAATATTAGG-AA-AGAAAGGGGACAAAACTATCAGC-GTATACTATGATTTCATCAA 1649
| ||||||| || || |||||||| |||| || ||||| | ||||||||||||| ||||
Sbjct 587 GAAAATATTGGGGAAGAGAAAGGG--CAAATCTCTCAGCAG-ATACTATGATTTCGTCAA 643
Query 1650 AGACACTT-TACATG---ATAAGAGTTCCAAGT-ACGAAAAGTTGTGTCATTCTTTTCCA 1704
|| || || || | | ||||||||||||||| | |||||||| ||||||||||| |||
Sbjct 644 AGTCA-TTATAGAAGCGGATAAGAGTTCCAAGTTA-GAAAAGTTATGTCATTCTTTGCCA 701
Query 1705 CCGGGTAAT---CTAG-AGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAAT 1760
||||| | | || ||||||| ||||||||| ||| ||| || |||||| |||| |
Sbjct 702 GAGGGTAGTAAGC-AGGAGAACAAAATCAGAAATTTATTGGTGTTGAGAGAAATGGGTGT 760
Query 1761 GCCTCACAAGTTGTTATTCTCCTTGCTCATCTCCGATAGCCA-ACCTGTATGTGGAAAAG 1819
|||||| | |||||||||||| ||||| || |||||| ||| | ||| ||||| ||||
Sbjct 761 GCCTCAGAGGTTGTTATTCTCATTGCTTATATCCGAT-GCCGGAGATGTTTGTGGTAAAG 819
Query 1820 AAAAATTTGAAGGAACC-CTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACCGGA 1878
|||||||| ||| || | |||||||||| ||||||||| ||||||||||||||||||| |
Sbjct 820 AAAAATTTAAAG-AATCACTCAAGAAGGCTGTTGAGATTGGTTTTGATCCAACCACCGCA 878
Query 1879 AAGTTTGTCGAAGCTCTAAACGTTATTTACAAAATGAA-CGAGAAAACAATCGAAGA-AA 1936
| |||||| ||||||| |||||| ||||| | | || ||| ||| ||| ||| | ||
Sbjct 879 ACTTTTGTCAAAGCTCTTAACGTTCTTTACGGATT-AAGCGACAAAGGAATTGAAAATAA 937
Query 1937 GATTCAAT-CTCTATAAAAGCTTAGGCTTTGATGCGGGA-GATGTATGGTCAA-GTTTCA 1993
||||||| | || |||||| |||||||| | || || | ||||||||| ||| ||| ||
Sbjct 938 -ATTCAATGC-CTGTAAAAGGTTAGGCTTGGCTGTGG-ACGATGTATGGGCAATGTT-CA 993
Query 1994 AAAAGTGGCCAATC-TCTCTGAGA--GTAACGGAGACGAAGAT-GTTGGACTCCATTGAA 2049
| |||||||||| | | ||||| | || | |||| |||||| | | ||||| |||||
Sbjct 994 AGAAGTGGCCAAACAT-TCTGACAAAGT--CTGAGAAGAAGATAGA-GAACTCCGTTGAA 1049
Query 2050 ACATTTCTTGGCCTAGGATTCAGCAGAGATGAGTTTACGAAGATGGTCAAGC-ACTTTCC 2108
|||||||| ||||||||||||||||||||||||||| || ||||||||||| | || ||
Sbjct 1050 ACATTTCTAGGCCTAGGATTCAGCAGAGATGAGTTTTTGATGATGGTCAAGCGA-TTCCC 1108
Query 2109 TCCGTGCATTGGATTAT-CTCCAGAGATGGTCAAAAAGAAAACTGAGTT-CTTGGTGAAG 2166
|| ||||||||||| || || ||||| || | || | ||| |||||||| || ||||| |
Sbjct 1109 TCAGTGCATTGGAT-ATTCTACAGAGTTGATGAAGACGAAGACTGAGTTTCT-GGTGACG 1166
Query 2167 AAGATGAATTGGCCACTAAAGGCTCTGGTTTCAAACCCTGCAGC-ACTAGGATACAGCCT 2225
||||||||||||||||||||||| ||| ||||| |||| ||| ||| |||||||||||
Sbjct 1167 GAGATGAATTGGCCACTAAAGGCTGTGGCTTCAATCCCT-CAGGTACTCGGATACAGCCT 1225
Query 2226 GGAGAAGAGGA-TCGTCCCAAGG 2247
|||||||||| | |||||||||
Sbjct 1226 AGAGAAGAGGACT-GTCCCAAGG 1247
Score = 634 bits (343), Expect = 1e-180
Identities = 776/979 (79%), Gaps = 53/979 (5%)
Strand=Plus/Plus
Query 225 CAA-GGCAAATCCTGAGTCAGTTCGGAGTCTTTTGACTAGTCATGGGTTCACAGATTCTC 283
||| ||| || ||||| || |||| ||||||||||| |||||||||||||| |||||||
Sbjct 392 CAAGGGC-AACCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACTGATTCTC 450
Query 284 AGATCTCCAGCATCATTACGA-TTTATCCACGATTGTTTTTATTAGATGCTAAGAAATCA 342
||||||||| |||||||| || ||| ||| ||||| || | |||||||| |||||||
Sbjct 451 AGATCTCCAACATCATTAGGACTTT-CCCAAGATTGCTTATCCTAGATGCTGAGAAATCC 509
Query 343 CTTGCTCCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACCGAG 402
||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||
Sbjct 510 CTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAGGTGCTTCAAGCTCTGAGCTCACCGAG 569
Query 403 ATTGTATC-AAAGGTTCCGGAAATATT-GGCAA-AGAAAGGAGACAAAACGCTAAGCAGA 459
| ||| || | |||||| ||||||| || || ||||||| | |||| | || ||||||
Sbjct 570 ACTGTTTCTGCA-GTTCCGAAAATATTGGGGAAGAGAAAGG-G-CAAATCTCTCAGCAGA 626
Query 460 TACTATGATTTCGTCAAAGTCATTGTTGAAGCAGATAAGAGTTCCAA-TTACGACAAGTT 518
|||||||||||||||||||||||| | ||||| |||||||||||||| ||| || |||||
Sbjct 627 TACTATGATTTCGTCAAAGTCATTATAGAAGCGGATAAGAGTTCCAAGTTA-GAAAAGTT 685
Query 519 ATGTCATTCTTTGCCTGTGGGTAAT---CTAG-AGAATAAAATCCGGAATATATCGGTTT 574
||||||||||||||| | ||||| | | || |||| |||||| | ||| ||| ||| |
Sbjct 686 ATGTCATTCTTTGCCAGAGGGTAGTAAGC-AGGAGAACAAAATCAGAAATTTATTGGTGT 744
Query 575 TAAGAGAACTCGGTGTGCCTCAGAGGTTGTTATTCCCTTTGCTCATCTCT-AGTGGGGGA 633
| |||||| | |||||||||||||||||||||||| | ||||| || || | || |||
Sbjct 745 TGAGAGAAATGGGTGTGCCTCAGAGGTTGTTATTCTCATTGCTTATATCCGA-TGCCGGA 803
Query 634 CCTGTCAATGGGAAAGAAAGGTTTGGAGAATCCATT-AAGAAG-CTTGTTGAGATGGGTT 691
||| ||| ||||||| ||| |||||| | | |||||| || |||||||| ||||
Sbjct 804 GATGTTTGTGGTAAAGAAAAATTTAAAGAATC-ACTCAAGAAGGCT-GTTGAGATTGGTT 861
Query 692 TTGATCCGACCACTACAAAGTTTGTTAAAGCTCTGCGCATTGTTCAAGGATTAAGCG-CA 750
||||||| ||||| ||| ||||| |||||||| | || || | |||||||||| ||
Sbjct 862 TTGATCCAACCACCGCAACTTTTGTCAAAGCTCTTAACGTTCTTTACGGATTAAGCGACA 921
Query 751 AAAACAATAGAAGAA-AAAGCCAAT-CTCTATAAAAGTTTAGGCTT---TG---ATGATG 802
|| ||| ||| || ||| |||| | || |||||| |||||||| || | ||||
Sbjct 922 AAGG-AATTGAA-AATAAATTCAATGC-CTGTAAAAGGTTAGGCTTGGCTGTGGACGATG 978
Query 803 TATGGGAAATTTTCAACAAATATCCAATCTTTCTGGCGCTCTCTGAGAAGAACATATTGA 862
|||||| ||| ||||| || | |||| | ||||| | ||||||||||| ||| ||
Sbjct 979 TATGGGCAATGTTCAAGAAGTGGCCAAACATTCTGACAAAGTCTGAGAAGAAGATAGAGA 1038
Query 863 ACTCTGTAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGAATTTGCAAAT-ATGGTC 921
|||| || |||||||||||||| |||||||||||||||||||| ||| | | ||||||
Sbjct 1039 ACTCCGTTGAAACATTTCTAGGCCTAGGATTCAGCAGAGATGAGTTTTTGA-TGATGGTC 1097
Query 922 AAGAGCTTTCCTCAGGGCATTGGATTATCCG-CAGAGACGGTTAAAAAGAAGACCGAATT 980
||| | || |||||| ||||||||| || | ||||| | | || | |||||| || ||
Sbjct 1098 AAGCGATTCCCTCAGTGCATTGGAT-ATTCTACAGAGTTGATGAAGACGAAGACTGAGTT 1156
Query 981 TCTGGTGAAGAAGATGAATTGGCCACTAAAGGCCCTGGTTTCAAACCCTGC-GGTACTTG 1039
|||||||| | |||||||||||||||||||||| ||| ||||| |||| | |||||| |
Sbjct 1157 TCTGGTGACGGAGATGAATTGGCCACTAAAGGCTGTGGCTTCAATCCCT-CAGGTACTCG 1215
Query 1040 GATACAACATGGAGAAGAGGATTGTACCAAGGTGTAACGTAATTAAAGCTCTCATGTCCA 1099
|||||| | | |||||||||| ||| ||||||||||| || || |||| |||||| || |
Sbjct 1216 GATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATCAAAGTTCTCATCTCAA 1275
Query 1100 AAGGACTGCTCGGAGACACAGGAAGCAAACTCCCTCCAATCGGGTCTGTTTTGA-AGAGT 1158
||||| |||||| | | | | | || ||||||||||| |||||||||| | |||
Sbjct 1276 AAGGATTGCTCG-A-A-A--GT--G-AA-CTCCCTCCAATATCCTCTGTTTTGACA-AGT 1325
Query 1159 ACCAATCAGGTCTTCTTTA 1177
|||| | |||| || ||||
Sbjct 1326 ACCAGTGAGGTGTT-TTTA 1343
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 656 bits (355), Expect = 0.0
Identities = 652/791 (82%), Gaps = 37/791 (5%)
Strand=Plus/Plus
Query 1230 AAATGCATCTTCTTTTTTCAATTTGTTTTCCTTTGCTACTACTGCTGCACATTTGAGTCC 1289
||| |||||| |||||| ||||| || |||| ||||| | |||| || || ||| ||
Sbjct 84 AAAGGCATCTCCTTTTTCCAATTCCTTCTCCTATGCTA--A-TGCTACAGATGCGAG-CC 139
Query 1290 -TAGAGTTGGTCGAAAAGGAAAGGA-CTTTACTTTCTCTTACCTCGTTGATTCATTAGGT 1347
||||| |||||||||||| || ||| || |||||||||||||||||||||| |||
Sbjct 140 TTAGAGCTGGTCGAAAAGG-GTTGAGTTTTTCTGTCTCTTACCTCGTTGATTCATTGGGT 198
Query 1348 TTACCTAAAAAGCTCGCAGAATCGATTTCAAGGAAAGTCAGCTTCGAGGACAAGGGCAAT 1407
|||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||
Sbjct 199 TTACCTAAAAAGGTCGCAGAATCGATCTCAAAGAAAGTCAGCTTCGAGGACAAAGGCAAT 258
Query 1408 CCTGATTCTGTTCTGAGTCTTTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGC 1467
|||||||||||||||||||| || ||| |||| ||||||||||||||||||||||| |||
Sbjct 259 CCTGATTCTGTTCTGAGTCTATTGAGAAGTCATGGGTTCACTGATTCTCAGATCTCAAGC 318
Query 1468 ATGATTG-GGATTTACCCACGATTGCTTTTA-CTAGATGCTGAGAAATCCCTTGCTCCCA 1525
|| ||| ||||| | |||| |||||| || || |||||||||||||| ||| |||||
Sbjct 319 ATCATTACGGATT-ATCCACAATTGCTAGTAGCT-GATGCTGAGAAATCAATTGGTCCCA 376
Query 1526 AGCTTCAGTTTTTGCAGTCCAGAGAAGCGTCAAGCTTTGAGCTCACTCAGATTGTTTCAA 1585
||||||||||| |||||||||||| ||| ||||| | |||||||||||| ||||| || |
Sbjct 377 AGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAAGGTCTGAGCTCACTCATATTGTATCTA 436
Query 1586 -AGGTTCCGGAAATATTAGGAAAGAAAGGGGACAAAACTATCAGCGTATACTATGATTTC 1644
|| |||| ||||| || || |||| ||||||||||||||||||| |||||||||||||
Sbjct 437 CAG-TTCCTGAAATCTTGGGGAAGAGAGGGGACAAAACTATCAGCATATACTATGATTTT 495
Query 1645 ATCAAAGACACTT-TACATG---ATAAGAGTTCCAAGTACGAAAAGTTGTGTCATTCTTT 1700
| ||||| | || || | | ||||||||||||||| ||||||||| |||||||||||
Sbjct 496 GTTAAAGAGA-TTATAGAAGCGGATAAGAGTTCCAAGTTCGAAAAGTTATGTCATTCTTT 554
Query 1701 TCCACCGGGTAAT---CTAG-AGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGG 1756
||| ||||| | | || ||||||| ||||||||||| | |||||| ||||||||||
Sbjct 555 GCCAGAGGGTAGTAAGC-AGGAGAACAAAATCAGAAATGTTTTGGTTTTGAGAGAATTGG 613
Query 1757 GAATGCCTCACAAG-TTGTTATTCTCC-TTGCTCATCTCCGAT-AGCCAACCTGTATGTG 1813
| | ||||| ||| ||||| ||| || ||||| || || ||| | ||||||||| ||||
Sbjct 614 GTGTTCCTCA-AAGGTTGTTGTTC-CCATTGCTTATATCTGATCA-CCAACCTGTCTGTG 670
Query 1814 GAAAAGAAAAATTTGAAGGAACC-CTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACC 1872
|||||||||| ||||||| || | |||||||| |||||||||||||||||||||||||||
Sbjct 671 GAAAAGAAAATTTTGAAG-AATCACTCAAGAAAGTTGTTGAGATGGGTTTTGATCCAACC 729
Query 1873 ACCGGAAAGTTTGTCGAAGCTCTAAACGTTATTTACAAAATGAACGAGAAAACAATCGAA 1932
||| |||||||||| ||||||| | ||| |||||| | | ||| ||||| || |||
Sbjct 730 ACCTCAAAGTTTGTCAAAGCTCTTAGGGTTGTTTACAGATTCCGCGACAAAACTATAGAA 789
Query 1933 G-AAA-GATTCAATCTCTATAAAAGCTTAGGCTTTGATGCGGGAGATGTATGGTCAA-GT 1989
| ||| | || ||| ||| |||||| ||||||||| || |||||||||||| ||| ||
Sbjct 790 GCAAAAG-TT-AATGTCTGTAAAAGTTTAGGCTTTTCTGTTGGAGATGTATGGGCAATGT 847
Query 1990 TTCAAAAAGTG 2000
|| || |||||
Sbjct 848 TT-AAGAAGTG 857
Score = 261 bits (141), Expect = 2e-68
Identities = 227/268 (85%), Gaps = 7/268 (3%)
Strand=Plus/Plus
Query 840 GCTCTCTGAGAAGAACATATTGAACTCTGTAGAAACATTTCTAGGTC-TAGGATTCAGCA 898
||| || ||| |||| ||| ||||||| | |||||||||||||| | ||||||| ||||
Sbjct 979 GCT-TCAGAGCAGAAGATAATGAACTCCATTGAAACATTTCTAGG-CTTAGGATTTAGCA 1036
Query 899 GAGATGAATTTGCAAAT-ATGGTCAAGAGCTTTCCTCAGGGCATTGGATTATCCGCAGAG 957
||||||| |||| ||| || | |||| |||||||||| || || ||||| ||||||
Sbjct 1037 GAGATGAGGTTGC-AATGATAGCCAAGCGCTTTCCTCAATGCCTTATTTTATCTGCAGAG 1095
Query 958 ACGGTTAA-AAAGAAGACCGAATTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCCCT 1016
|| || || ||| ||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct 1096 ACAGTGAAGAAA-AAGACTGAGTTTCTGGTGAAGAAGATGAATTGGCCACTAAAGGCTGT 1154
Query 1017 GGTTTCAAACCCTGCGGTACTTGGATACAACATGGAGAAGAGGATTGTACCAAGGTGTAA 1076
|||||||| |||||||||||||||||||| | | |||||||||| | | |||||||||||
Sbjct 1155 GGTTTCAACCCCTGCGGTACTTGGATACAGCTTAGAGAAGAGGACTATCCCAAGGTGTAA 1214
Query 1077 CGTAATTAAAGCTCTCATGTCCAAAGGA 1104
|||||||||||||||||||||||||||
Sbjct 1215 TGTAATTAAAGCTCTCATGTCCAAAGGA 1242
Score = 196 bits (106), Expect = 6e-49
Identities = 186/224 (83%), Gaps = 8/224 (4%)
Strand=Plus/Plus
Query 2028 GAAGATGTTGGACTCCATTGAAACATTTCTTGGCCTAGGATTCAGCAGAGATGAGTTTAC 2087
|||||| || ||||||||||||||||||| ||| ||||||| |||||||||||| || |
Sbjct 990 GAAGATAATGAACTCCATTGAAACATTTCTAGGCTTAGGATTTAGCAGAGATGAGGTTGC 1049
Query 2088 GAA-GATGGTCAAGCACTTTCCTCCGTGCATTGGATTATCTCCAGAGATGGTCAA-AAAG 2145
|| ||| | ||||| |||||||| ||| || |||||| |||||| || || |||
Sbjct 1050 -AATGATAGCCAAGCGCTTTCCTCAATGCCTTATTTTATCTGCAGAGACAGTGAAGAAA- 1107
Query 2146 AAAACTGAG-TTCTTGGTGAAGAAGATGAATTGGCCACTAAAGGCTCTGGTTTCAAACCC 2204
|| |||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1108 AAGACTGAGTTTC-TGGTGAAGAAGATGAATTGGCCACTAAAGGCTGTGGTTTCAACCCC 1166
Query 2205 TGCAGCACTAGGATACAGCCTGGAGAAGAGGA-TCGTCCCAAGG 2247
||| | ||| ||||||||| | |||||||||| | ||||||||
Sbjct 1167 TGCGGTACTTGGATACAGCTTAGAGAAGAGGACTA-TCCCAAGG 1209
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 645 bits (349), Expect = 0.0
Identities = 689/846 (81%), Gaps = 52/846 (6%)
Strand=Plus/Plus
Query 1180 AGAAGGTCAGT-CGAGTTGCAGAAATGGCGTAACTTGAGAGTTT-CAGTGCCAAATGCAT 1237
||||||| || | ||||||||||||||||| | |||||| ||| |||| ||||| ||
Sbjct 254 AGAAGGTTGGTAC-AGTTGCAGAAATGGCGTCATTTGAGA-TTTGTTGTGCAAAATGGAT 311
Query 1238 CTTCTTTTTTC-AATTTGTTTTCCTTTGCTACTACTGCTGCACATTTGAGTC-CTAGAGT 1295
| | |||||| |||| | || | || || ||| |||| | ||||||| | | ||||
Sbjct 312 CAGC-TTTTTCTAATTCCTATT-C-TT-CTGCTAGTGCTACTGATTTGAG-CTCAAGAGA 366
Query 1296 TGGTCGAAAAG-GAAAGGACTTTACTTTCTCTTACCTCGTTGATTCATTAGGTTTACCTA 1354
||||||||||| | ||| |||||||| |||||||||||||||||||||| |||||| |||
Sbjct 367 TGGTCGAAAAGTG-AAGAACTTTACTGTCTCTTACCTCGTTGATTCATTGGGTTTAGCTA 425
Query 1355 -AAAAGCTCGCAGAATCGATTTCAAGGAAAGTCAGCTTCGAGGACAAGGGCAATCCTGAT 1413
|||| ||||| ||||| || |||| ||||||||| |||| | |||||||||||||||||
Sbjct 426 CAAAA-CTCGCTGAATCAATCTCAAAGAAAGTCAGTTTCGTGAACAAGGGCAATCCTGAT 484
Query 1414 TCT-GTTCTGAGTCTTTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGCATGAT 1472
| | |||||||||||||||||| || | |||||||| ||||||||||||| ||||| ||
Sbjct 485 T-TAGTTCTGAGTCTTTTTAGAAGTTATGGGTTCACAAATTCTCAGATCTCCAGCATCAT 543
Query 1473 T-GGGATTTA-CCCACGATTGCTTTTACTAGATGCTGAGAAATCCCTTGCTCCCAAGCTT 1530
| ||| ||| || | |||||||| || |||||||||||||||| |||| | |||||||
Sbjct 544 TACGGA-TTATCCTA-GATTGCTTCTAATAGATGCTGAGAAATCACTTGATATCAAGCTT 601
Query 1531 CAGTTTTTGCAGTCCAGAGAAGCGTCAAGCTTTGAGCTCACTCAGATTGTTTC-AAAGGT 1589
||||||||| |||| |||| ||| |||||| ||||||||||||||||||||| | | ||
Sbjct 602 CAGTTTTTGGAGTCTAGAGGAGCTTCAAGCCCTGAGCTCACTCAGATTGTTTCTACA-GT 660
Query 1590 TCCGGAAATATTAGGAAAGAAAG-GGGACAAAACTATCA-GC-GTATACTATGATTTCAT 1646
||| ||||||| |||| ||||| |||| || || | | || | ||||||||||||| |
Sbjct 661 TCCTAAAATATTGGGAATGAAAGAGGGA-AAGTCTCT-AGGCAG-ATACTATGATTTCGT 717
Query 1647 CAAAGACACTT-T---A-CATGATAAGAGTTCCAAGTACGAAAAGTTGTGTCATTCTTTT 1701
|||||| | || | | || |||||||||||||||||||||| |||||||| ||||
Sbjct 718 CAAAGAGA-TTATAGAAGCA-GATAAGAGTTCCAAGTACGAAACTTTGTGTCAACCTTTG 775
Query 1702 CCACCGGGTAAT---CTAGAG-AACAAGATCAGAAATGTATCGGTT-TTAAGAGAATTGG 1756
||| || |||| | || | || || ||||||||||| |||||| || ||||| ||||
Sbjct 776 CCAGAGGCTAATAGGC-AGGGTAATAAAATCAGAAATGTTTCGGTTCTT-AGAGACTTGG 833
Query 1757 GAATGCCTCACAAGTTGTTATTCTCCTTGCTCATCTCCGATAGCC-AACCTGTATGTGGA 1815
| ||||||| |||||||||||||||||||||||||| ||| ||| ||||||| ||||||
Sbjct 834 GTGTGCCTCAGAAGTTGTTATTCTCCTTGCTCATCTCTGAT-GCCCAACCTGTTTGTGGA 892
Query 1816 AAAGAAAAATTTGAAGGAACC-CTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCAC 1874
|||||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct 893 AAAGAAAATTTTGAAG-AATCACTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCAC 951
Query 1875 CGGAAAGTTTGTCGAAGCTCTAAACGTTATTTACAAAATGAACGAGAAAACAATCGAAGA 1934
| |||||||||| ||||||| | | | |||||| | | | ||| |||||||| |||||
Sbjct 952 CTCAAAGTTTGTCCAAGCTCTTAGGGCTGTTTACAGATTCACCGACAAAACAATAGAAGA 1011
Query 1935 AAGA-TTCAATCTCTATAAAAGCTTAGGCTTTGATGCGGGAGATGTATGGTCAA-GTTTC 1992
|||| || ||| | |||||| | || ||||||| || || |||||||||| ||| ||| |
Sbjct 1012 AAGAGTT-AATGTGTATAAAGGGTTCGGCTTTGCTGTGGAAGATGTATGGGCAATGTT-C 1069
Query 1993 AA-AAA 1997
|| |||
Sbjct 1070 AAGAAA 1075
> AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902150-22903837 FORWARD
LENGTH=1688
Length=1688
Score = 608 bits (329), Expect = 7e-173
Identities = 679/844 (80%), Gaps = 40/844 (5%)
Strand=Plus/Plus
Query 1180 AGAAGGTCAGTCGAGTTGCAGAAA-TGGCGTAACTTGAGAGTTTCAGTGCCAAATGCATC 1238
||||||| ||| |||| |||||| || | ||| || ||||||||||| | ||| | |||
Sbjct 114 AGAAGGTTGGTCCAGTTACAGAAATTGTC-TAATTTCAGAGTTTCAGTTCAAAACGGATC 172
Query 1239 TTCTTTTTTCAATTTGTTTTCCTTTGCTACTACTGCTGCACATTTGAGTCC-TAGAGTTG 1297
| |||| | ||||| || || ||||||| | ||||| || || || || || |
Sbjct 173 TGCTTTGTCCAATTCCTTCTCTTTTGCTAGTGTTGCTG---ATGCGA-CCCTTATAGATA 228
Query 1298 GTCGAAAAGGAAAGGACTTTACTTTCTCTTACCTCGTTGATTCATTAGGTTT-ACCTAAA 1356
| | ||||| || ||||||| |||||||||| ||||||||||| ||||| ||| | |
Sbjct 229 GCCTTAAAGGTAACAACTTTACAGTCTCTTACCTAGTTGATTCATTGGGTTTAACC-ACA 287
Query 1357 AAGCTCGCAGAATCGAT-TTCAAGGAAAGTCAGCTTCGAGGACAAGG-GCAATCCTGATT 1414
||||||||||||||||| | ||| |||||| ||||||||||| ||| | ||||| ||||
Sbjct 288 AAGCTCGCAGAATCGATCTCCAA-GAAAGTAAGCTTCGAGGA-GAGGAGAAATCCGGATT 345
Query 1415 CTGTTCTGAGTCTTTTTAGATGTCAGGGGTTCACTGATTCTCAGATCTCTAGCATGATTG 1474
|||||||||||||| ||| | || | |||||||| | |||||||| || || || |||
Sbjct 346 CTGTTCTGAGTCTTCTTACAAGTTATGGGTTCACAAAGTCTCAGATTTCAAGTATCATTA 405
Query 1475 GGATTTACCCACGATTGCTTTTACTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGT 1534
|| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct 406 CTATCTACCCACGATTGCTTGCATTAGATGCTGAGAAATCCATTGCTCCCAAGCTTCAGT 465
Query 1535 TTTTGCAGTCCAGAGAAGCGTCAAGCTTTGAGCTCACTCAGATTGTTTCAAAGGTTCCGG 1594
| |||||||||||| ||| ||||||| ||||||||||||||||||||| | |||||
Sbjct 466 CTCTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTCAGATTGTTTCTACTGTTCCTA 525
Query 1595 AAATATTAGGAAAGAAAGGGGACAAAACTATCAGC-GTATACTATGATTTCATCAAAGAC 1653
|||| || || |||| |||| ||||| |||| | | ||||||||||||||| ||||||||
Sbjct 526 AAATCTTGGGGAAGAGAGGGCACAAATCTAT-AACTGTATACTATGATTTCGTCAAAGAC 584
Query 1654 ACTT-TA-CA--TGATAAGAGTTCCAAG-TACGAAAAGTTGTGTCATTCTTTTCCACCGG 1708
| || || | ||||||||||| | || ||||||||||| |||||||||||||||| ||
Sbjct 585 A-TTATAGAAGCTGATAAGAGTT-CTAGTTACGAAAAGTTATGTCATTCTTTTCCACAGG 642
Query 1709 GTAATCTAG-AGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCAC 1767
|||| | || |||| |||||||||||| | || ||||| ||||||||||| || ||||
Sbjct 643 GTAA-CAAGAAGAATAAGATCAGAAATATCTCTGTTTTGAGAGAATTGGGTGTGGCTCA- 700
Query 1768 AAG-TTGTTATTCTCC-TTGCTCATCTCCGATAGCCAACCTGTATGTGGAAAAGAAAAAT 1825
| ||||||||| || ||||||||||| ||| |||||||||| ||||| ||||||| ||
Sbjct 701 GCGTTTGTTATTC-CCTTTGCTCATCTCAGATGGCCAACCTGTCTGTGGTAAAGAAAGAT 759
Query 1826 TTGAAGGAA-CCCTCAAGAAGGTTGTTGAGATGGGTTTTGATCC--A-ACCACCGGAAAG 1881
||||| ||| | |||||||||||||||||||||||||||||||| | || || ||||
Sbjct 760 TTGAA-GAATCTCTCAAGAAGGTTGTTGAGATGGGTTTTGATCCGGAGACTAC---AAAG 815
Query 1882 TTTGTCGAAGCTCTAA-ACGTTATTTACAAAATGAACGAGAAAACAATCGAAGAAAGATT 1940
|| || |||||||| | ||||||||| |||| || |||||||| ||||||| | |
Sbjct 816 TTCGTTGAAGCTCTGCGA-GTTATTTACCGTATGAGTGACAAAACAATAGAAGAAAAAGT 874
Query 1941 CAATCTCTATAAAAGCTTAGGCTTTGATGCGGGAGATGTATGGTCAAGT-TTCAAAAAGT 1999
|||| |||| ||||| |||||||||| || || ||||||||| ||| | ||||| ||||
Sbjct 875 CAATGTCTACAAAAGGTTAGGCTTTGGTGTGGCTGATGTATGGGCAA-TCTTCAAGAAGT 933
Query 2000 GGCC 2003
||||
Sbjct 934 GGCC 937
Score = 464 bits (251), Expect = 2e-129
Identities = 473/578 (82%), Gaps = 24/578 (4%)
Strand=Plus/Plus
Query 231 AAATCCTGAGTCAGTTCGGAGTCTT-TTGACTAGTCATGGGTTCACAGATTCTCAGATCT 289
|||||| || || |||| ||||||| || || ||| ||||||||||| | |||||||| |
Sbjct 335 AAATCCGGATTCTGTTCTGAGTCTTCTT-ACAAGTTATGGGTTCACAAAGTCTCAGATTT 393
Query 290 CCAGCATCATTACGATTTATCCACGATTGTTTTTATTAGATGCTAAGAAAT-CACTTGCT 348
| || |||||||| || || ||||||||| || |||||||||| |||||| || |||||
Sbjct 394 CAAGTATCATTACTATCTACCCACGATTGCTTGCATTAGATGCTGAGAAATCCA-TTGCT 452
Query 349 CCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCAC-CGAGATTGT 407
||||||||| ||| | |||||||||||||||||||||||||||||||||| | |||||||
Sbjct 453 CCCAAGCTTCAGTCTCTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTC-AGATTGT 511
Query 408 ATCAAAGGTTCCGGAAATATTGGCAAAGAAAGGAG-ACAAAACGCTAAGCAG-ATACTAT 465
|| | ||||| |||| |||| |||| ||| | ||||| | ||| | | |||||||
Sbjct 512 TTCTACTGTTCCTAAAATCTTGGGGAAGAGAGG-GCACAAATCTATAA-CTGTATACTAT 569
Query 466 GATTTCGTCAAAGTCATTGTTGAAGCAGATAAGAGTTCCAATTACGACAAGTTATGTCAT 525
||||||||||||| |||| | ||||| ||||||||||| | |||||| ||||||||||||
Sbjct 570 GATTTCGTCAAAGACATTATAGAAGCTGATAAGAGTTCTAGTTACGAAAAGTTATGTCAT 629
Query 526 TCTTTGCCTGTGGGTAATCTAGA-GAATAAAATCCGGAATATATCGGTTTTAAGAGAACT 584
||||| || |||||| | ||| |||||| ||| | ||||| || ||||| |||||| |
Sbjct 630 TCTTTTCCACAGGGTAA-CAAGAAGAATAAGATCAGAAATATCTCTGTTTTGAGAGAATT 688
Query 585 CGGTGTGCCTCAGAGGTTGTTATTCCCTTTGCTCATCTCTAG-TGGGGGACCTGTCAATG 643
|||||| ||||| | ||||||||||||||||||||||| || ||| ||||||| ||
Sbjct 689 GGGTGTGGCTCAGCGTTTGTTATTCCCTTTGCTCATCTC-AGATGGCCAACCTGTCTGTG 747
Query 644 GGAAAGAAAGGTTTGGAGAATC-CATTAAGAAGCTTGTTGAGATGGGTTTTGATCCG-AC 701
| |||||||| |||| |||||| | | |||||| ||||||||||||||||||||||| |
Sbjct 748 GTAAAGAAAGATTTGAAGAATCTC-TCAAGAAGGTTGTTGAGATGGGTTTTGATCCGGAG 806
Query 702 CACTACAAAGTTTGTTAAAGCTCTGCGCA-TTGTTCAAGG-ATTAAGCG-CAAAAACAAT 758
||||||||||| ||| |||||||||| | || || | | || | | | ||||| ||||
Sbjct 807 -ACTACAAAGTTCGTTGAAGCTCTGCG-AGTTATTTACCGTATGA-GTGACAAAA-CAAT 862
Query 759 AGAAGAAAAAGCCAATCTCTATAAAAGTTTAGGCTTTG 796
||||||||||| |||| |||| ||||| ||||||||||
Sbjct 863 AGAAGAAAAAGTCAATGTCTACAAAAGGTTAGGCTTTG 900
Score = 91.6 bits (49), Expect = 3e-17
Identities = 80/95 (84%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 22 ATGTGTTCTCTGATACTCCATGGAAGAAGGTTGGTCCAGTTACAGAAATGGTGTCATTTG 81
|||| | ||||||||| |||||||||||||||||||||||||||||||| || | ||||
Sbjct 90 ATGTATGCTCTGATACACCATGGAAGAAGGTTGGTCCAGTTACAGAAATTGTCTAATTTC 149
Query 82 AGTTTTTCAGTGCAAAA-GGCTTCTTCTTTTTCCA 115
|| ||||||| ||||| || | || |||| ||||
Sbjct 150 AGAGTTTCAGTTCAAAACGGAT-CTGCTTTGTCCA 183
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 479 bits (259), Expect = 6e-134
Identities = 701/909 (77%), Gaps = 51/909 (6%)
Strand=Plus/Plus
Query 225 CAAGGCAAATCCTGAGTCAGTTC-GGAGTCTTTTGACTAGTCATGGGTTCACAGATTCTC 283
||||| |||| |||| || |||| ||| |||| | | ||| |||||||||| |||||||
Sbjct 339 CAAGGGAAATTCTGATTCCGTTCTGGA-TCTTCTCAGAAGTTATGGGTTCACTGATTCTC 397
Query 284 AGATCTCCAGCATCATTACGATTTATCCACGATTGTTTTTATTA-GATGCTAAGAAATCA 342
|||||||||||||||| | || | || || || || || || | ||| | || |||
Sbjct 398 AGATCTCCAGCATCATCAGGAGTGATTCAAGAGTGCTTATA-GACAATGATGCGACATCC 456
Query 343 CTTGCTCCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACCGAG 402
|||| | | |||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 457 CTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACTGAG 516
Query 403 ATTGTAT-CAAAGGTTCCGGAAATATT-GGCAA-AGAAAGGAGACAAAACGCTAAGCAGA 459
|||| | || | ||||| |||| || || || ||| ||| | |||| | || ||||||
Sbjct 517 GTTGTTTCCACA-GTTCCTAAAATCTTGGGGAAGAGAGAGG-G-CAAATCTCTCAGCAGA 573
Query 460 TACTATGATTTCGTCAAAGTCATTGTTGAAGCAGATAAGAGTTCCAATTACGACAAGTTA 519
|| ||||||||| ||||||||||| | ||||| |||||||||||||| || || ||| ||
Sbjct 574 TATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGTTCCAAGTATGAAAAGATA 633
Query 520 TGTCATTCTTTGCCTGTGGGTAATCTAGAGAATAAAATCCGGAATATATCGGTTTTAAGA 579
| |||||||||| | |||||| | | || ||| | ||||| | |||||| |||
Sbjct 634 TCTCATTCTTTGGCACAGGGTAA-C-A-AG------ATCAGAAATATCTTGGTTTTGAGA 684
Query 580 GAACTCGGTGTGCCTCAGAGGTTGTTATTCCCTTTGCTCATCT-CTAGTGGGGGACCTGT 638
||||| || |||||||| | | |||| | | ||||||||||| | | | | | |||||
Sbjct 685 GAACTAGGCGTGCCTCAAAAGCGGTTACTGCTTTTGCTCATCTCCAAATCGCAG-CCTGT 743
Query 639 CAATGGGAAAGAAAGGTTTGGA-GAATCCA-TTAAGAAGCTTGTTGAGATGGGTTTTGAT 696
||| ||||||| |||| || | || || | |||||| | ||||||||||||||||||
Sbjct 744 TTGTGGAAAAGAAAAGTTT-GATGCAT-CACTCAAGAAGGTAGTTGAGATGGGTTTTGAT 801
Query 697 CCGACCA-CTACAAAGTTTGTTAAAGCTCTGCGCAT-TG-TTCAAGGATTAAGCGCA-AA 752
|| |||| || ||| |||||| | ||| | |||| || || | | | |||| | ||
Sbjct 802 CCAACCACCT-CAACGTTTGTGCACGCT-T-TGCATATGCTTTACCAAATGAGCG-ACAA 857
Query 753 AACAATAGAAG-AAAAAGCCAATCTCTATAAAAGTTTAGG-----CT-TTGATGATGTAT 805
||| || |||| ||||| || | |||||| |||| |||| || ||||||||||||
Sbjct 858 AACGATTGAAGAAAAAATCCGA-GTCTATAGAAGTGTAGGTTTCTCTGTTGATGATGTAT 916
Query 806 GGGAAATTTTCAACAAATATCCAATCT-TTCTGGCGC-TCTCTGAGAAGAACATATTGAA 863
||| ||| ||||| || | ||| || || || | | | || |||||||| || ||
Sbjct 917 GGGCAATGTTCAAGAAGTGGCCACGCTCTT-TGACACAT-TCGGAGAAGAAGGTAGCCAA 974
Query 864 CTCTGTAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGAATTTGCAAAT-ATGGTCA 922
|||| |||||||||||||||||||||||||||||||||||| ||| | | ||| |||
Sbjct 975 CTCTATAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGTGTTTATGA-TGATGTTCA 1033
Query 923 AGAGCTTTCCTCAGGGCATTGGATTATCCG-CAGAGACGGTTAAAAAGAAGACCGAATTT 981
|| | ||||||| | | ||||||| || | ||||| |||| || |||||||| || |||
Sbjct 1034 AGCGGTTTCCTCCGTGTATTGGAT-ATTCTACAGAGGCGGTGAAGAAGAAGACTGAGTTT 1092
Query 982 CTGGTGAAGAAGATGAATTGGCCACTAAAGGCCCTGGTTTCAAACCCTGC-GGTACTTGG 1040
|||| ||| |||||||||||||| ||||||| ||| ||||| |||| | |||||||||
Sbjct 1093 TTGGTCAAGGAGATGAATTGGCCAGTAAAGGCTGTGGCTTCAATCCCT-CAGGTACTTGG 1151
Query 1041 ATACAACATGGAGAAGAGGATTGTACCAAGGTGTAACGTAATTAAAGCTCTCATGTCCAA 1100
||||| | | |||||||||| ||| ||||||||||| || || |||| ||||||||| ||
Sbjct 1152 ATACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATCAAAGTTCTCATGTCAAA 1211
Query 1101 AGGACTGCT 1109
|||| ||||
Sbjct 1212 AGGATTGCT 1220
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 412 bits (223), Expect = 6e-114
Identities = 498/623 (80%), Gaps = 49/623 (8%)
Strand=Plus/Plus
Query 225 CAA-GGCAAATCCTGAGT-CAGTTCGGAGTCTT-TTGACTAGTCATGGGTTCACAGATTC 281
||| ||| |||||||| | |||||| || |||| || | ||||||| ||||||||||||
Sbjct 433 CAAGGGC-AATCCTGA-TACAGTTCTGAATCTTCTT-AGAAGTCATGAGTTCACAGATTC 489
Query 282 TCAGATCTCCAGCATCATTACG-ATTTATCCA-CGATTGTTTTTATTAGATGCTAAGAAA 339
||||||||||||||||||| || ||| ||||| | |||| || || ||||||| | |||
Sbjct 490 TCAGATCTCCAGCATCATTTCGGATT-ATCCAAC-ATTGCTTGTAGCAGATGCTGA-AAA 546
Query 340 T-CACTTGCTCCCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCAC 398
| |||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct 547 TTCACTTGGTCCCAAGCTTCTGTTGATGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCAC 606
Query 399 CGAGATTGTATC-AAAGGTTCCGGAAATATT-GGCAAAGAAAGGAGACAAAACGCTAA-G 455
|||||||| || |||| |||| |||| || || || |||||| ||||||| | || |
Sbjct 607 TGAGATTGTTTCTAAAG-TTCCTAAAATCTTAGG-AATGAAAGGGGACAAAA-G-TATCG 662
Query 456 -CAGATACTATGATTTCGTCAAAGTCATTGTTGAAGCAGATAAGAGTTCCAA-TTACGAC 513
||||||||||||| ||||||||| ||| | ||||| |||||||| ||||| || |||
Sbjct 663 GCAGATACTATGATATCGTCAAAGAGATTATAGAAGCGGATAAGAGCTCCAAGTT-CGAA 721
Query 514 AAGTTATGTCATTCTTTGCCTGTGGGTAAT---CTAG-AGAATAAAATCCGGAATATATC 569
||| | |||||||||||||||| ||||| | | || ||||||||||| ||||| |||
Sbjct 722 AAGCTGTGTCATTCTTTGCCTGAGGGTAGTAAGC-AGGAGAATAAAATCAGGAATGTATT 780
Query 570 GGTTTTAAGAGAACTCGGTGTGCCTCAGAGGTTGTTATTCCCTTTGCTCATCTCTAGTGG 629
|||||| ||||| | ||||||||||| |||||||||||| | |||||| |||||| |
Sbjct 781 GGTTTTGAGAGATTTGGGTGTGCCTCAAAGGTTGTTATTCTCATTGCTCTTCTCTAATC- 839
Query 630 GGGACC-TGTCAA-TG-GGAAA-GAAAGGTTTGGAGAATCCATT-AAGAAGCTTGTTGAG 684
||| |||| || ||||| |||| ||||| |||||| | | || ||| |||||| |
Sbjct 840 ---ACCATGTCTGCTGTGGAAAAGAAAAGTTTGAAGAATC-ACTCAACAAGGTTGTTGGG 895
Query 685 ATGGGTTTTGATCCGACCACTACAAAGTTTGTTAAAGCTCTGCGCATTGTTCAAGGATTA 744
|||||||||||||| |||||| |||||||||| ||||| | |||||||| | |||||
Sbjct 896 ATGGGTTTTGATCCCACCACTCCAAAGTTTGTGGAAGCTTTATGCATTGTTTACGGATTG 955
Query 745 AGCG-CAAAA-ACAATAGAAGAAAAAGCCAATCTCTATAAAAG-TTTAGGCTT---TG-A 797
|||| ||||| || |||||||||| |||| |||| || || ||| ||||| || |
Sbjct 956 AGCGACAAAAGAC--TAGAAGAAAACTTCAATGTCTACAAGAGATTT-GGCTTAACTGTA 1012
Query 798 T--GATGTATGGGAAATTTTCAA 818
|||||||||||| |||||||
Sbjct 1013 AACGATGTATGGGAACTTTTCAA 1035
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 398 bits (215), Expect = 2e-109
Identities = 357/423 (84%), Gaps = 19/423 (4%)
Strand=Plus/Plus
Query 1603 GGAAAGAA-AGGGGACAAAACTATCAGCGTATACTATGATTTCATCAAAGACACTTT--- 1658
||||| || |||| |||||||| ||||| |||||||||||||| | ||||| | |||
Sbjct 460 GGAAA-AAGAGGGCACAAAACTCTCAGCTTATACTATGATTTCGTTAAAGAGAGTTTAGA 518
Query 1659 A-CATGATAAGAGTTCCAAGTACGAAAAGTTGTGTCATTCTTTTCCACCGGGTAATCTAG 1717
| || ||||||||||| ||||| |||| || ||||| |||||||||| ||||||||| |
Sbjct 519 AGCA-GATAAGAGTTCTAAGTATGAAACTTTATGTCAGTCTTTTCCACAGGGTAATCTGG 577
Query 1718 AGAACAAGATCAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTAT 1777
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 AGAACAAGAAGAGAAATGTATCGGTTTTAAGAGAATTGGGAATGCCTCACAAGTTGTTAT 637
Query 1778 TCTCCTTGCTCATCTCCGATAGCCAACCTGTATGTGGAAAAGAAAAATTTGA-AGGAACC 1836
|| ||||||| || |||| | | |||||||||||||||||||| | |||| | | | |
Sbjct 638 TCCCCTTGCTTATATCCGTTGGTCAACCTGTATGTGGAAAAGATAGATTTAATACGT-CT 696
Query 1837 CTCAAGAAGGTTGTTGAGATGGGTTTTGATCCAACCACCGGAAAGTTTGTCGAAGCTCTA 1896
||||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||||
Sbjct 697 CTCAAGAAGGTAGTTGAGATGGGTTTTGATCCGACCACCGCAAAGTTTGTCAAAGCTCTC 756
Query 1897 AACGTTAT-TTACAAAATGAACGAGAAAACAATCGAAGAAAGATTCAATCTCTATAAAA- 1954
|||| || |||| |||||||||| |||||||| ||||||| | ||||| |||| ||||
Sbjct 757 CACGT-ATCTTACGAAATGAACGACAAAACAATAGAAGAAAAAGTCAATGTCTACAAAAT 815
Query 1955 GCTTAGGCTTTGATGCGGGAGATGTATGG-TCAAGT-TTCAAAAAGTGGCCA-ATCTCTC 2011
| |||||||||| || || |||||||||| | || | ||||| ||||||||| | ||||
Sbjct 816 G-TTAGGCTTTGCTGTGGAAGATGTATGGGT-AA-TCTTCAAGAAGTGGCCATA-CTCTT 871
Query 2012 TGA 2014
|||
Sbjct 872 TGA 874
Score = 73.1 bits (39), Expect = 1e-11
Identities = 63/74 (85%), Gaps = 4/74 (5%)
Strand=Plus/Plus
Query 22 ATGTGTTCTCTGATACTCCATGGAAGAAGGT-TGGTCCAGTTACAGAAATGGTGTCA-TT 79
||||||||||||||||||||||||||||| | | || ||||||| |||||| || | ||
Sbjct 121 ATGTGTTCTCTGATACTCCATGGAAGAAGATCTA-TCGAGTTACATAAATGGCGTAACTT 179
Query 80 TGAGTTTTTCAGTG 93
| ||| ||||||||
Sbjct 180 T-AGTGTTTCAGTG 192
> AT1G62055.1 | Symbols: | pseudogene, hypothetical protein |
chr1:22940331-22940864 REVERSE LENGTH=534
Length=534
Score = 202 bits (109), Expect = 1e-50
Identities = 172/203 (85%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 231 AAATCCTGAGTCAGTTCGGAGTCTT-TTGACTAGTCATGGGTTCACAGATTCTCAGATCT 289
||||||||| || |||| || |||| || | ||| |||| |||||||||||||||||||
Sbjct 294 AAATCCTGATTCTGTTCTGAATCTTCTT-AGAAGTTATGGTTTCACAGATTCTCAGATCT 352
Query 290 CCAGCATCATTACGATTTATCCACGATTGTTTTTATTAGATGCTAAGAAATCACTTGCTC 349
| || |||||||| | |||||| || ||| || || ||||||||||||||||||||||||
Sbjct 353 CAAGTATCATTACAAATTATCCTCGGTTGCTTATAGTAGATGCTAAGAAATCACTTGCTC 412
Query 350 CCAAGCTTAAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCACCGAGATTGTAT 409
|||||||| || |||||||||| |||||||||||||||||||||||||| |||| ||| |
Sbjct 413 CCAAGCTTCAGGTTTTGCAGTCTAGAGGAGCTTCAAGCTCTGAGCTCACTGAGACTGTTT 472
Query 410 CAAAGGTTCCGGAAATATTGGCA 432
| | ||||| |||| ||||||
Sbjct 473 CTACCGTTCCTAAAATCTTGGCA 495
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116565665490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5