BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924813
Length=1331
Score E
Sequences producing significant alignments: (Bits) Value
AT1G62120.1 | Symbols: | Mitochondrial transcription terminati... 1127 0.0
AT1G61980.1 | Symbols: | Mitochondrial transcription terminati... 952 0.0
AT1G62085.1 | Symbols: | Mitochondrial transcription terminati... 815 0.0
AT1G62010.1 | Symbols: | Mitochondrial transcription terminati... 795 0.0
AT1G62110.1 | Symbols: | Mitochondrial transcription terminati... 780 0.0
AT1G61990.1 | Symbols: | Mitochondrial transcription terminati... 723 0.0
AT1G62490.1 | Symbols: | Mitochondrial transcription terminati... 335 7e-91
AT1G62150.1 | Symbols: | Mitochondrial transcription terminati... 281 1e-74
> AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960191-22961779 REVERSE
LENGTH=1589
Length=1589
Score = 1127 bits (610), Expect = 0.0
Identities = 1091/1311 (83%), Gaps = 82/1311 (6%)
Strand=Plus/Plus
Query 17 TTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTGC-CT 75
||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct 136 TTGTAATGTATTCTCTGATTCTCCATGGAAGAAAGTTGGTCCAGTTGCAGAAATGGCGC- 194
Query 76 TATCTGA-GATTTGCAGT--A-------GAAAATGCATCTGCTTTTTCCAAT-CCGTTCT 124
|| ||| | ||| |||| | |||||| ||| |||||||||||| || ||||
Sbjct 195 CATTTGAGGGTTT-CAGTGAATCTTTTTCAAAATGGATCAGCTTTTTCCAATACC-TTCT 252
Query 125 -CTTCTGCTGCAAGTGATGCTGATGTGAGCCT-TGGAGATGGTCGAAAAGG-GA-AGACT 180
|| || |||| | || |||||||||||| || |||||||||||||||| | | |||
Sbjct 253 CCTCCT-CTGCTATTGCTGCTGATGTGAG-CTCAAGAGATGGTCGAAAAGGTCACA-ACT 309
Query 181 TTCACAGTCTCTTACCTCGTTGATTCTTTGGGTTTATCTA-AAAAGCTCGCAGAATCTAT 239
|| ||||| ||||||||||||||||| || |||||| ||| ||||| |||| ||||| ||
Sbjct 310 TT-ACAGTTTCTTACCTCGTTGATTCATTAGGTTTAGCTACAAAAG-TCGCTGAATCGAT 367
Query 240 TTCTAGGAAAGTCAGCTTCTGTTCTGGCAAGGGTAATCCTGATTCTGTTCTGAGTCTTTT 299
|| | ||||||||| ||| | | |||||| || |||||||||||||||||||||||
Sbjct 368 CTCCATGAAAGTCAGTTTC-G--ATAACAAGGGCAACCCTGATTCTGTTCTGAGTCTTTT 424
Query 300 GAGAAGTCATGGGTTCACAGATACTCAGATCTCCACCATCATTACGAATTACCCACGATT 359
|||||||||||||||||| ||| |||||||||||| |||||||| || || |||| ||||
Sbjct 425 GAGAAGTCATGGGTTCACTGATTCTCAGATCTCCAACATCATTAGGACTTTCCCAAGATT 484
Query 360 GCTTA-CATTAGATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAG 418
||||| | ||||||||||||||||||||| |||||||||||||||||||||||| | ||
Sbjct 485 GCTTATC-CTAGATGCTGAGAAATCCCTTGCTCCCAAGCTTCAGTTTCTGCAGTCCATAG 543
Query 419 GAGCTTCAAGCTCTGAGCTAACTC-AGATTGTTTCTACAGTTCCTAAAATCTT-GGGAA- 475
| ||||||||||||||||| || | ||| ||||||| ||||||| ||||| || |||||
Sbjct 544 GTGCTTCAAGCTCTGAGCTCAC-CGAGACTGTTTCTGCAGTTCCGAAAATATTGGGGAAG 602
Query 476 AGAGAGGGCACAAAACTATCAGCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGG 535
||| |||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 AGAAAGGG--CAAATCTCTCAGCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGG 660
Query 536 ACAAGAGTTCCAAG-TACGAGAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAG 594
| |||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 661 ATAAGAGTTCCAAGTTA-GAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAG 719
Query 595 AACAAAATCCGAAATTTATTGGTTTTGAGAGAACTGGGGGTGCCTCAGAGGTTGTTATTC 654
||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct 720 AACAAAATCAGAAATTTATTGGTGTTGAGAGAAATGGGTGTGCCTCAGAGGTTGTTATTC 779
Query 655 TCCTTGCTCATCTCCAAT-CA--ACATGTCTGCTGTGGAAAAGAAATTTTTGAAGTATCA 711
|| ||||| || ||| || | | |||| | ||||| ||||||| ||| ||| ||||
Sbjct 780 TCATTGCTTATATCCGATGCCGGAGATGT-T--TGTGGTAAAGAAAAATTTAAAGAATCA 836
Query 712 CTCA-GAAAGG-TCGTTGATCTGGGTTTTGATCCCACCACCTCAACGTTTGTCGAAGCCC 769
|||| ||| || | ||||| | ||||||||||| |||||| |||| |||||| |||| |
Sbjct 837 CTCAAGAA-GGCT-GTTGAGATTGGTTTTGATCCAACCACCGCAACTTTTGTCAAAGCTC 894
Query 770 TGTGCAC-TG-TTTACGGAATGAGCGACAAAACAATAGAAGAA-AAAGTCGATGTCTATA 826
| | || | |||||||| | ||||||||| ||| ||| || ||| || ||| || ||
Sbjct 895 T-TA-ACGTTCTTTACGGATTAAGCGACAAAGGAATTGAA-AATAAATTCAATGCCTGTA 951
Query 827 AAAGGTTAGGCTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAGTGGCCACTC-TCT 885
||||||||||||| |||||||| |||||||||||||||||||||||||||||| | | |
Sbjct 952 AAAGGTTAGGCTTGGCTGTGGACGATGTATGGGCAATGTTCAAGAAGTGGCCAAACAT-T 1010
Query 886 CTTG-CAAACTCGGAGAAGAAGGTAGCCAACTCCATTGAAACATTTCTTGGTCTAGGATT 944
|| | |||| || ||||||||| ||| |||||| ||||||||||||| || ||||||||
Sbjct 1011 CT-GACAAAGTCTGAGAAGAAGATAGAGAACTCCGTTGAAACATTTCTAGGCCTAGGATT 1069
Query 945 CAGCAGAGATGACTTTGTAAGGATGGTCAAGCGGTTTCCTCAGTGCATTGGATTAT-CTG 1003
|||||||||||| ||| | | |||||||||||| || |||||||||||||||| || ||
Sbjct 1070 CAGCAGAGATGAGTTTTTGATGATGGTCAAGCGATTCCCTCAGTGCATTGGAT-ATTCTA 1128
Query 1004 CAGAGTTGGTGAAGAAGAAGACTGAGTTTGTGGTGAAAAAGATGAATTGGCCACTAAAGG 1063
|||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1129 CAGAGTTGATGAAGACGAAGACTGAGTTTCTGGTGACGGAGATGAATTGGCCACTAAAGG 1188
Query 1064 CTCTGGTTTCAAACCCTCAGGTACTTGGATTA-AGCATGGAGAAGAGGATTGTCCCAAGG 1122
|| ||| ||||| |||||||||||| |||| | ||| | |||||||||| ||||||||||
Sbjct 1189 CTGTGGCTTCAATCCCTCAGGTACTCGGAT-ACAGCCTAGAGAAGAGGACTGTCCCAAGG 1247
Query 1123 TGTAACGTAATCAAAGCTCTCATCTTAAAAG-ATCTGCTTGGAGACACAAGAAGCAAACT 1181
||||| || ||||||| |||||||| ||||| || |||| | | | | | | || ||
Sbjct 1248 TGTAATGTTATCAAAGTTCTCATCTCAAAAGGAT-TGCTCG-A-A-A---GT-G-AA-CT 1297
Query 1182 CCCTCCACT--CCGGTATGTTTTGAT---TACG-GATGAGAAGTTCTTGGAAATGTATGT 1235
||||||| | || | |||||||| ||| | |||| ||| || | ||||||||
Sbjct 1298 CCCTCCAATATCC--TCTGTTTTGACAAGTACCAG-TGAGGTGTTTTTATATATGTATGT 1354
Query 1236 CAGGAAGCACGATGACAAGCAGCTTGTGGCCGAGTTGATGGCTATCTTCAC 1286
||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1355 TAGGAAACATGATGACAAGCAGCTTGTGGCTGAGTTGATGGCTATCTTCAC 1405
> AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908045-22909588 FORWARD
LENGTH=1544
Length=1544
Score = 952 bits (515), Expect = 0.0
Identities = 950/1153 (82%), Gaps = 58/1153 (5%)
Strand=Plus/Plus
Query 18 TGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTGCCTTA 77
||| |||||||||||||||| |||||||||||| |||||| |||| ||||||| || | |
Sbjct 114 TGTCATGTATTCTCTGATTCGCCATGGAAGAAGTTTGGTCGAGTTACAGAAATGGCGTCA 173
Query 78 TCTGAGA-TTTGCAGTAG-AAAATGCATCTGCTTTTTCCAA-TCCGTTCTCTTCTGCTGC 134
| ||||| ||| ||| | |||| || ||| |||| ||||| ||| ||||| |||||| |
Sbjct 174 TTTGAGAGTTT-TAGT-GCAAAAGGCGTCTCCTTTGTCCAATTCC-TTCTCCTCTGCTTC 230
Query 135 AAGTGATGCTG-ATGTGAG-CCTTGGAGATGGTCGAAAAGGGAAGA-CTTTCACAGTCTC 191
|| ||| | | |||| || | ||| |||||||||||| |||| |||| ||||||||
Sbjct 231 ---TGCTGC-GCGTTTGAGTCC-TAGAGTTGGTCGAAAAGGTAAGAGCTTT-ACAGTCTC 284
Query 192 TTACCTCGTTGATTCTTTGGGTTTATCTAAAAAGCTCGCAGAATCTATTTCTAGGAAAGT 251
||||||||||||||| ||||||||| | ||||||||||| ||||| | || ||||| ||
Sbjct 285 TTACCTCGTTGATTCATTGGGTTTACCCAAAAAGCTCGCTGAATCGGTCTCAAGGAAGGT 344
Query 252 CAGCTTCTGTTCTGG-CAAGGGTAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCATG 310
|||||| | || ||||| || ||||| |||||||||| |||||||||||||||||
Sbjct 345 TAGCTTC-G---AGGACAAGGACAACCCTGACTCTGTTCTGAATCTTTTGAGAAGTCATG 400
Query 311 GGTTCACAGATACTCAGATCTCCACCATCATTACGAATTACCCACGATTGCTTACA-TTA 369
||||||| ||| ||||||||||||||||| ||||| |||| |||| ||||||| | |
Sbjct 401 GGTTCACTGATTCTCAGATCTCCACCATCGTTACGGATTATCCACAATTGCTTGTAGCT- 459
Query 370 GATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGCTTCAAGC 429
|||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct 460 GATGCTGAGAAATCACTTGCTCCCAAGCTTCAGTTTTTGCAGTCTAGAGGAGCTTCAAGC 519
Query 430 TCTGAGCTAACTCAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGGGCACAAA 489
|||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 520 TCTGAGCTCACTGAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGGCCACAAA 579
Query 490 ACTATCAGCAG-ATACTATGATTTCGTCAAAGTCA-TTATAGAAGCGGACAAGAGTTCCA 547
||||||||| | || |||||||||| |||||| | || || | | ||||||||||
Sbjct 580 ACTATCAGC-GTATTCTATGATTTCATCAAAGAAACTT-TACTTG---ATAAGAGTTCCA 634
Query 548 AGTACGAGAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCCGAA 607
||| ||| |||| |||||| |||| ||| |||||| | | ||||||||| ||| |||
Sbjct 635 AGTCCGAAAAGTCATGTCAACCTTTTCCACAGGGTAAT---CTGGAGAACAAGATCAGAA 691
Query 608 ATTTAT-TGGTTTTGAGAGAACTGGGGGTGCCTCAGAGGTTGTTATTCTCCTTGCTCATC 666
|||||| || ||||||||||| ||||| ||||||| | |||||||||| |||||||||||
Sbjct 692 ATTTATCTG-TTTTGAGAGAATTGGGGATGCCTCACAAGTTGTTATTCCCCTTGCTCATC 750
Query 667 TCCAATCAACATGTCTG-CTGT-GGAAAAGAAATTTTTGAAGTATCACTCA-GAAAGGTC 723
|| | | | | ||| || | || ||||||| ||||||| ||| |||| ||||| |
Sbjct 751 TCTTGTGA-CGTACCTGTCT-TCGGTAAAGAAAAATTTGAAGAATCCCTCAAGAAAGTT- 807
Query 724 GTTGATCTGGGTTTTGATCCCA-CCACCTCAACGTTTGTCGAAGCCCTGTGCACTGTTTA 782
||||| ||||||||||||| | ||||||||| |||||| ||||| ||||| |||| |
Sbjct 808 GTTGAGATGGGTTTTGATCC-ATCCACCTCAAAGTTTGTGGAAGCTTTGTGCGTTGTTCA 866
Query 783 CGGAATGAGCGACAAAA-CAATAGAAGAAAAAGTCGATGTC-TATAAAAGGTTAGGCTTT 840
|| |||||||||||| || ||||||| |||||| ||| | ||||||||||||||||||
Sbjct 867 AAGATTGAGCGACAAAAACA-TAGAAGATAAAGTCAATG-CGTATAAAAGGTTAGGCTTT 924
Query 841 GCTGTGGAAGATGTATGGGCAATGTTCAAGAAGTGGCCACTCTCTCTTG-CAAACTCGGA 899
| ||||||| |||||||| || ||||||||| ||||||| || ||| | || |||||||
Sbjct 925 GATGTGGAATATGTATGGACAGTGTTCAAGAGGTGGCCAAACTTTCT-GACACACTCGGA 983
Query 900 GAAGAAGGTAGCCAACTCCATTGAAACATTTCTTGGTCTAGGATTCAGCAGAGATGACTT 959
||||||| || ||| |||||||||||||||| || ||||| |||||||||||||| ||
Sbjct 984 GAAGAAGATATTGAACACCATTGAAACATTTCTAGGCCTAGGGTTCAGCAGAGATGAGTT 1043
Query 960 T-GTAAGGATGGTCAAGCGGTTTCCTCAGTGCATTGGATTATCTGCAGAGTTGGTGAAGA 1018
| | | | | ||||| ||||||||| ||||||||||||| || ||| |||| || |
Sbjct 1044 TAGCGTGT-TAATTAAGCGCTTTCCTCAGGGCATTGGATTATCCGCGGAGATGGTTAAAA 1102
Query 1019 AGAAGACTGAGTTTGTGGTGAAA-AAGATGAATTGGCCACTAAAGGCTCTGGTTTCAAAC 1077
|||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct 1103 AGAAGACTGAGTTTTTGGT-AAAGAAGATGAATTGGCCACTAAAGGCTCTTGTTTCAAAC 1161
Query 1078 CCT-CAGGTACTTGGATTA-AGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAAT-C 1134
||| | ||| ||||||| | ||| | |||||||||| |||||||||| |||||||| | |
Sbjct 1162 CCTGC-GGTGCTTGGAT-ACAGCCTAGAGAAGAGGACTGTCCCAAGGGGTAACGTAGTTC 1219
Query 1135 AAAGCTCTCATCT 1147
|| ||||||||||
Sbjct 1220 AA-GCTCTCATCT 1231
> AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=1386
Length=1386
Score = 815 bits (441), Expect = 0.0
Identities = 736/874 (84%), Gaps = 37/874 (4%)
Strand=Plus/Plus
Query 22 ATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTG-CCTTATCT 80
|||||||||||||| |||||||||| |||||||||||||||| ||||| || | | || |
Sbjct 1 ATGTATTCTCTGATACTCCATGGAAAAAGGTTGGTCCAGTTGAAGAAA-TGTCGTCATTT 59
Query 81 GAGATTTGCAGT--A-------GAAAATGCATCTGCTTTTTCCAA-TCCGTTCTCTTCTG 130
|| || |||| | ||||| |||||| |||||||||| ||| ||||| | ||
Sbjct 60 AAGCGTTCCAGTGAACCTCCTCGAAAAGGCATCTCCTTTTTCCAATTCC-TTCTCCTATG 118
Query 131 CTGCAAGTGATGCTGATGTGAGCCTTGGAGATGGTCGAAAAGGGAAGACTTTCACAGTCT 190
|| || || | | |||| ||||||| ||| ||||||||||||| || ||| | ||||
Sbjct 119 CT--AA-TGCTACAGATGCGAGCCTTAGAGCTGGTCGAAAAGGGTTGAGTTTTTCTGTCT 175
Query 191 CTTACCTCGTTGATTCTTTGGGTTTATCTAAAAAGCTCGCAGAATCTATTTCTAGGAAAG 250
|||||||||||||||| ||||||||| |||||||| |||||||||| || || | |||||
Sbjct 176 CTTACCTCGTTGATTCATTGGGTTTACCTAAAAAGGTCGCAGAATCGATCTCAAAGAAAG 235
Query 251 TCAGCTTCTGTTCTGG-CAAGGGTAATCCTGATTCTGTTCTGAGTCTTTTGAGAAGTCAT 309
|||||||| | || ||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 236 TCAGCTTC-G---AGGACAAAGGCAATCCTGATTCTGTTCTGAGTCTATTGAGAAGTCAT 291
Query 310 GGGTTCACAGATACTCAGATCTCCACCATCATTACGAATTACCCACGATTGCTTA-CA-T 367
|||||||| ||| |||||||||| | |||||||||| |||| |||| ||||| || |
Sbjct 292 GGGTTCACTGATTCTCAGATCTCAAGCATCATTACGGATTATCCACAATTGC-TAGTAGC 350
Query 368 TAGATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGCTTCAA 427
| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 351 T-GATGCTGAGAAATCAATTGGTCCCAAGCTTCAGTTTCTGCAGTCCAGAGGAGCTTCAA 409
Query 428 GCTCTGAGCTAACTCAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGGGCACA 487
| |||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||| |||
Sbjct 410 GGTCTGAGCTCACTCATATTGTATCTACAGTTCCTGAAATCTTGGGGAAGAGAGGGGACA 469
Query 488 AAACTATCAGCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGGACAAGAGTTCCA 547
|||||||||||| |||||||||||| || |||| |||||||||||||| ||||||||||
Sbjct 470 AAACTATCAGCATATACTATGATTTTGTTAAAGAGATTATAGAAGCGGATAAGAGTTCCA 529
Query 548 AGTACGAGAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCCGAA 607
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 530 AGTTCGAAAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCAGAA 589
Query 608 AT-TTATTGGTTTTGAGAGAACTGGGGGTGCCTCAGAGGTTGTTATTCTCC-TTGCTCAT 665
|| || ||||||||||||||| |||| || ||||| |||||||| ||| || ||||| ||
Sbjct 590 ATGTT-TTGGTTTTGAGAGAATTGGGTGTTCCTCAAAGGTTGTTGTTC-CCATTGCTTAT 647
Query 666 CTCCAATCAACATGTCTG-CTGTGGAAAAGAAATTTTTGAAGTATCACTCA-GAAAGGTC 723
|| |||| || ||| |||||||||||||| |||||||| |||||||| ||||| |
Sbjct 648 ATCTGATCACCAAC-CTGTCTGTGGAAAAGAAAATTTTGAAGAATCACTCAAGAAAGTT- 705
Query 724 GTTGATCTGGGTTTTGATCCCACCACCTCAACGTTTGTCGAAGCCCTGT-GCACTGTTTA 782
||||| ||||||||||||| |||||||||| ||||||| |||| || | | ||||||
Sbjct 706 GTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCAAAGCTCT-TAGGGTTGTTTA 764
Query 783 CGGAATGAGCGACAAAACAATAGAAGAAAAAGTCGATGTCTATAAAAGGTTAGGCTTTGC 842
| || | |||||||||| ||||||| |||||| |||||| |||||| ||||||||| |
Sbjct 765 CAGATTCCGCGACAAAACTATAGAAGCAAAAGTTAATGTCTGTAAAAGTTTAGGCTTTTC 824
Query 843 TGT-GGAAGATGTATGGGCAATGTTCAAGAAGTG 875
||| ||| ||||||||||||||||| ||||||||
Sbjct 825 TGTTGGA-GATGTATGGGCAATGTTTAAGAAGTG 857
> AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915745-22917330 FORWARD
LENGTH=1586
Length=1586
Score = 795 bits (430), Expect = 0.0
Identities = 853/1048 (81%), Gaps = 66/1048 (6%)
Strand=Plus/Plus
Query 263 CTGGCAAGGGTAATCCTGATTCTGTTCT-GAGTCTTTTGAGAAGTCATGGGTTCACAGAT 321
||| |||||| ||| ||||||| ||||| || |||| | |||||| |||||||||| |||
Sbjct 335 CTGACAAGGGAAATTCTGATTCCGTTCTGGA-TCTTCTCAGAAGTTATGGGTTCACTGAT 393
Query 322 ACTCAGATCTCCACCATCATTACGAATTACCCACGATTGCTTACATTA-GATGCTGAGAA 380
|||||||||||| |||||| | || | | || || |||||| | | ||| || ||
Sbjct 394 TCTCAGATCTCCAGCATCATCAGGAGTGATTCAAGAGTGCTTATA-GACAATGATGCGAC 452
Query 381 ATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGCTTCAAGCTCTGAGCTAAC 440
|||||||||| | |||||||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct 453 ATCCCTTGGTTCAAAGCTTCAGTTTTTGCAGTCCAGAGGAGCTTCAAGCTCTGAGCTCAC 512
Query 441 TCAGATTGTTTCTACAGTTCCTAAAATCTT-GGGAA-AGAGAGGGCACAAAACTATCAGC 498
| || ||||||| ||||||||||||||||| ||||| |||||||| |||| || |||||
Sbjct 513 TGAGGTTGTTTCCACAGTTCCTAAAATCTTGGGGAAGAGAGAGGG--CAAATCTCTCAGC 570
Query 499 AGATACTATGATTTCGTCAAAGTCATTATAGAAGCGGACAAGAGTTCCAAGTACGAGAAG 558
||||| ||||||||| ||||||||||||||||||| || |||||||||||||| || |||
Sbjct 571 AGATATTATGATTTCATCAAAGTCATTATAGAAGCTGATAAGAGTTCCAAGTATGAAAAG 630
Query 559 TTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAAATCCGAAATTTATTGGTT 618
||| |||||||||| || | || |||| || || ||| ||||| | ||||||
Sbjct 631 ATATCTCATTCTTTGGCACA-GG--GTAA-CA--AG------ATCAGAAATATCTTGGTT 678
Query 619 TTGAGAGAACTGGGGGTGCCTCAGAGGTTGTTA-TTCTCCTTGCTCATCTCC-AATCAAC 676
||||||||||| || |||||||| | | |||| | || |||||||||||| |||| |
Sbjct 679 TTGAGAGAACTAGGCGTGCCTCAAAAGCGGTTACTGCT-TTTGCTCATCTCCAAATC-GC 736
Query 677 ATGTCTG-CTGTGGAAAAGAAATTTTTGAAGTATCACTC-AGAAAGGTCGTTGATCTGGG 734
| | ||| ||||||||||||| ||||| | ||||||| || ||||| ||||| ||||
Sbjct 737 A-GCCTGTTTGTGGAAAAGAAAAGTTTGATGCATCACTCAAG-AAGGTAGTTGAGATGGG 794
Query 735 TTTTGATCCCACCACCTCAACGTTTGTCGAAGCCCTGTGCA-CTG-TTTACGGAATGAGC 792
||||||||| ||||||||||||||||| | | | || |||| || ||||| |||||||
Sbjct 795 TTTTGATCCAACCACCTCAACGTTTGT-GCA-CGCTTTGCATATGCTTTACCAAATGAGC 852
Query 793 GACAAAACAATAGAAGAAAAAGT-CGATGTCTATAAAAGGT-TAGGCTTT-GCTGTGGAA 849
|||||||| || ||||||||| | ||| ||||||| || || |||| ||| |||| ||
Sbjct 853 GACAAAACGATTGAAGAAAAAATCCGA-GTCTATAGAA-GTGTAGG-TTTCTCTGTTGAT 909
Query 850 GATGTATGGGCAATGTTCAAGAAGTGGCCACTCTCTCTTG-CAAACTCGGAGAAGAAGGT 908
||||||||||||||||||||||||||||||| |||| ||| || | ||||||||||||||
Sbjct 910 GATGTATGGGCAATGTTCAAGAAGTGGCCACGCTCT-TTGACACATTCGGAGAAGAAGGT 968
Query 909 AGCCAACTCCATTGAAACATTTCTTGGTCTAGGATTCAGCAGAGATGACTTTGTAAGGAT 968
||||||||| || ||||||||||| |||||||||||||||||||||| ||| | | |||
Sbjct 969 AGCCAACTCTATAGAAACATTTCTAGGTCTAGGATTCAGCAGAGATGTGTTTATGATGAT 1028
Query 969 GGTCAAGCGGTTTCCTCAGTGCATTGGATTAT-CTGCAGAGTTGGTGAAGAAGAAGACTG 1027
| ||||||||||||||| ||| ||||||| || || ||||| |||||||||||||||||
Sbjct 1029 GTTCAAGCGGTTTCCTCCGTGTATTGGAT-ATTCTACAGAGGCGGTGAAGAAGAAGACTG 1087
Query 1028 AGTTTGTGGTGAAAAAGATGAATTGGCCACTAAAGGCTCTGGTTTCAAACCCTCAGGTAC 1087
||||| |||| || |||||||||||||| |||||||| ||| ||||| |||||||||||
Sbjct 1088 AGTTTTTGGTCAAGGAGATGAATTGGCCAGTAAAGGCTGTGGCTTCAATCCCTCAGGTAC 1147
Query 1088 TTGGATTA-AGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAATCAAAGCTCTCATC 1146
|||||| | ||| | |||||||||| ||||||||||||||| || ||||||| ||||||
Sbjct 1148 TTGGAT-ACAGCCTAGAGAAGAGGACTGTCCCAAGGTGTAATGTTATCAAAGTTCTCATG 1206
Query 1147 TTAAAAG-ATCTGCTTGGAGACACAAGAAGCAAACTCCCTCCACTC-CGGTATGTTTTGA 1204
| ||||| || |||||| | | | | | || ||||||||| | | | ||||||||
Sbjct 1207 TCAAAAGGAT-TGCTTG-A-A-A---GT-G-AA-CTCCCTCCAATGTCT-TCTGTTTTGA 1255
Query 1205 T---TACG-GATGAGAAGTTCTTGGAAAT--GTATGTCAGGAAGCACGATGACAAGCAGC 1258
||| | |||| ||| || |||| |||||| || || || |||||||||||||
Sbjct 1256 CAAGTACTAG-TGAGTCGTTTTT--AAATTTGTATGTTAGCAAACATGATGACAAGCAGC 1312
Query 1259 TTGTGGCCGAGTTGATGGCTATCTTCAC 1286
||||||| ||| ||||||| ||||||||
Sbjct 1313 TTGTGGCTGAGCTGATGGCAATCTTCAC 1340
> AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22957876-22959711 REVERSE
LENGTH=1836
Length=1836
Score = 780 bits (422), Expect = 0.0
Identities = 762/917 (83%), Gaps = 60/917 (7%)
Strand=Plus/Plus
Query 17 TTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTGCCTT 76
|||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| || |
Sbjct 225 TTGTCATGTATTCTGTGATACTCCATGGAAGAAGGTTGGTACAGTTGCAGAAATGGCGTC 284
Query 77 ATCTGAGATTTGCAGTAG-AAAATGCATCTGCTTTTTCCAA-TCCGT-TCTCTTCTGCTG 133
|| ||||||||| || | |||||| ||| |||||||| || ||| | | |||||||||
Sbjct 285 ATTTGAGATTTGTTGT-GCAAAATGGATCAGCTTTTTCTAATTCC-TAT-TCTTCTGCT- 340
Query 134 CAAGTGATGCTGATGTGAGCCT-TGGAGATGGTCGAAAAGGGAAG-ACTTTCACAGTCTC 191
|||| | ||||| |||| || ||||||||||||||| |||| ||||| || |||||
Sbjct 341 --AGTGCTACTGATTTGAG-CTCAAGAGATGGTCGAAAAGTGAAGAACTTT-ACTGTCTC 396
Query 192 TTACCTCGTTGATTCTTTGGGTTTATCTA-AAAAGCTCGCAGAATCTATTTCTAGGAAAG 250
||||||||||||||| ||||||||| ||| |||| ||||| ||||| || || | |||||
Sbjct 397 TTACCTCGTTGATTCATTGGGTTTAGCTACAAAA-CTCGCTGAATCAATCTCAAAGAAAG 455
Query 251 TCAGCTTCTGTTCTG-GCAAGGGTAATCCTGATTCT-GTTCTGAGTCTTTTGAGAAGTCA 308
|||| ||| | || |||||| |||||||||| | |||||||||||||| |||||| |
Sbjct 456 TCAGTTTC-G---TGAACAAGGGCAATCCTGATT-TAGTTCTGAGTCTTTTTAGAAGTTA 510
Query 309 TGGGTTCACAGATACTCAGATCTCCACCATCATTACGAATTA-CCCACGATTGCTTAC-A 366
|||||||||| || |||||||||||| |||||||||| |||| || | |||||||| | |
Sbjct 511 TGGGTTCACAAATTCTCAGATCTCCAGCATCATTACGGATTATCCTA-GATTGCTT-CTA 568
Query 367 TTAGATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGCTTCA 426
|||||||||||||||| |||| | ||||||||||||| || |||| ||||||||||||
Sbjct 569 ATAGATGCTGAGAAATCACTTGATATCAAGCTTCAGTTTTTGGAGTCTAGAGGAGCTTCA 628
Query 427 AGCTCTGAGCTAACTCAGATTGTTTCTACAGTTCCTAAAATCTTGGGAA--AGAGAGGGC 484
||| ||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||
Sbjct 629 AGCCCTGAGCTCACTCAGATTGTTTCTACAGTTCCTAAAATATTGGGAATGAAAGAGGG- 687
Query 485 ACAAAACTATCA-GCAGATACTATGATTTCGTCAAAGTCATTATAGAAGCGGACAAGAGT 543
| || || | | |||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 688 A-AAGTCTCT-AGGCAGATACTATGATTTCGTCAAAGAGATTATAGAAGCAGATAAGAGT 745
Query 544 TCCAAGTACGAGAA-GTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAG-AACAAAA 601
||||||||||| || || ||||| |||||||||||| || || ||||| | || ||||
Sbjct 746 TCCAAGTACGA-AACTTTGTGTCAACCTTTGCCAGAGGCTAATAGGCAGG-GTAATAAAA 803
Query 602 TCCGAAAT-TTATTGGTT-TTGAGAGAAC-TGGGGGTGCCTCAGAGGTTGTTATTCTCCT 658
|| ||||| || | |||| || |||| || |||| |||||||||| ||||||||||||||
Sbjct 804 TCAGAAATGTT-TCGGTTCTT-AGAG-ACTTGGGTGTGCCTCAGAAGTTGTTATTCTCCT 860
Query 659 TGCTCATCTCCAAT---CAACATGTCTGCTGTGGAAAAGAAATTTTTGAAGTATCACTC- 714
|||||||||| || |||| ||| | ||||||||||||| |||||||| |||||||
Sbjct 861 TGCTCATCTCTGATGCCCAACCTGT-T--TGTGGAAAAGAAAATTTTGAAGAATCACTCA 917
Query 715 AGAAAGGTCGTTGATCTGGGTTTTGATCCCACCACCTCAACGTTTGTCGAAGCCCTGT-G 773
|| ||||| ||||| ||||||||||||| |||||||||| ||||||| |||| || | |
Sbjct 918 AG-AAGGTTGTTGAGATGGGTTTTGATCCAACCACCTCAAAGTTTGTCCAAGCTCT-TAG 975
Query 774 CACTGTTTACGGAATGAGCGACAAAACAATAGAAGAAAAAGTCGATGTCTATAAAAGGTT 833
|||||||| || | | |||||||||||||||||||| ||| |||| |||||| ||||
Sbjct 976 GGCTGTTTACAGATTCACCGACAAAACAATAGAAGAAAGAGTTAATGTGTATAAAGGGTT 1035
Query 834 AGGCTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAGTGGCC--ACTCTCTCTTGCA 891
|||||||||||||||||||||||||||||||||||||| || || ||| | | ||| |
Sbjct 1036 CGGCTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAATGTCCTTACT-T-T-TTG-A 1091
Query 892 A-ACT-CGGAGAAGAAG 906
| | | |||||||||||
Sbjct 1092 ATAGTTCGGAGAAGAAG 1108
> AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911205-22912935 FORWARD
LENGTH=1731
Length=1731
Score = 723 bits (391), Expect = 0.0
Identities = 1043/1340 (78%), Gaps = 116/1340 (9%)
Strand=Plus/Plus
Query 13 CTTGTTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAGTTGCAGAAATTG 72
||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct 241 CTT-TTGTAATGTATTCTCTGATTCTCCATGGAAGAAGGTTGGTCCAATCGCAGAAAT-G 298
Query 73 CCTT-A-TCTGAGA-TTTGCAGTAG-AAAATGCATCTGCTTTT-TCCAAT-CCGTTCTCT 126
| || | | |||| ||| |||| | ||||||||| || |||| |||||| || ||||||
Sbjct 299 C-TTGAGTTTGAGTGTTT-CAGT-GCAAAATGCATTTG-TTTTGTCCAATTCC-TTCTCT 353
Query 127 TCTGCTGCAAGTGATGCTGATGTGAGCCTTGGAGATGGTCGAAAAGGGAAGA-CTTTCAC 185
|||||| | | | ||||||||||||| || ||||||||||||||||||||| |||| ||
Sbjct 354 TCTGCT--A-GAGCTGCTGATGTGAGCATTAGAGATGGTCGAAAAGGGAAGAACTTT-AC 409
Query 186 AGTCTCTTACCTCGTTGATTCTTTGGGTTTATCTAAAAAGCTCGCAGAATCTATTTCTAG 245
||||||||||||||||||||| ||||||||||||||||||||||| ||||| || || ||
Sbjct 410 AGTCTCTTACCTCGTTGATTCATTGGGTTTATCTAAAAAGCTCGCTGAATCCATCTCAAG 469
Query 246 GAAAGTCAGCTTCTGTTCTGG-CAAGGGT-AATCCTGATTCTGTTCTGAGTCT-TTTGAG 302
|||||| ||||| || || ||||| | ||||||||||||||||| ||||| ||| ||
Sbjct 470 GAAAGTTAGCTT-TGA---GGACAAGG-TCAATCCTGATTCTGTTCTAAGTCTGTTT-AG 523
Query 303 AAGTCATGGGTTCACAGATACTCAGATCTCCACCATCATTACGAATTACCCACGATTGCT 362
|||| | |||||||||||| |||||||||| |||||||||||| |||| || ||||||
Sbjct 524 AAGTTACGGGTTCACAGATTCTCAGATCTCTACCATCATTACGGATTATCCGTTATTGCT 583
Query 363 TACATTAGATGCTGAGAAATCCCTTGGTCCCAAGCTTCAGTTTCTGCAGTCAAGAGGAGC 422
| | ||||||| ||||| | ||||||| |||||||||| |||||||||| ||||||||
Sbjct 584 TGTAGCAGATGCTAAGAAAGCACTTGGTCGCAAGCTTCAGATTCTGCAGTCTAGAGGAGC 643
Query 423 TTCAAGCTCTGAGCTAACTCAGATTGTTTCTACAGTTCCTAAAATCTTGGGAAAGAGAGG 482
||||||||||||| | ||| |||||||||||||||| || | |||||| ||||||| |
Sbjct 644 TTCAAGCTCTGAGATCACTGAGATTGTTTCTACAGTACCGAGAATCTTAGGAAAGA-A-- 700
Query 483 GCACAAAACTATCAGCAG-ATACTATGATT-TCGTCAAAGTCATTATAGAAGCGGACAAG 540
| |||| | | | |||||||||| | ||||||| |||||||| ||| || | |
Sbjct 701 --AT----CTATTA-CTGTATACTATGATGCT-GTCAAAGACATTATAGTAGCCGATACG 752
Query 541 AGTTCCAAGTACGAGAAGTTATGTCATTCTTTGCCAGAGGGTAGTAAGCAGGAGAACAAA 600
||||| | | | ||||| | || ||| ||||| | || || ||| |||
Sbjct 753 AGTTC---G-A-G-----TTATGA-ACTC----CCACAGGGTTCTCAG--GG-GAATAAA 794
Query 601 ATCCGAAATTTATTGGTTTTGAGAGAACTGGGGGTGCCT-CAGAGGTTGTTATT-CTCCT 658
||||||||| ||| || |||||||||| | || ||||| | |||||||||| | |||
Sbjct 795 ATCCGAAATGTATCGGCTTTGAGAGAATTAGGCATGCCTTCTC-GGTTGTTATTAC-CCT 852
Query 659 TGCTCATCTCCAA-TCAACATGTCTGC-TGTGGAAAAGAAATTTTTGAAGTATCACTCA- 715
||||| ||||||| || || | ||| ||||||||||||| |||||| | ||| || |
Sbjct 853 TGCTCGTCTCCAAATCG-CA-GCCTGTGTGTGGAAAAGAAAATTTTGATGCATCCCTTAA 910
Query 716 GAAAGGTCGTTGATCTGGGTTTTGATCCCACCACCTC-AACGTTTGTCGAAGCCCTGTGC 774
||| ||| ||||| |||| ||||||||||||||| | || ||||| ||| || |
Sbjct 911 GAA-GGTTGTTGAGATGGGGTTTGATCCCACCACCACTAAA-TTTGTTTTAGCTTTGCGG 968
Query 775 ACTG-TTTACGGAATGAGCGACAAAACAATAGAAGAAAAAGTCG-ATGTCTATAAAAGGT 832
| || ||||| ||||||||| ||||| || ||||||||||| | | |||| || ||| |
Sbjct 969 A-TGCTTTACCAAATGAGCGAGAAAACGATTGAAGAAAAAGTTGTA-GTCTTTAGAAGTT 1026
Query 833 TAGGCTTTGCTGTGGAAGATGTATGGGCAATGTTCAAGAAGTGGCCACTCTCTCTTGCAA 892
|||| ||| ||||||| |||||||||| ||| ||||||||| || ||| | ||| ||
Sbjct 1027 TAGGTTTTACTGTGGATGATGTATGGGAAATTTTCAAGAAGACTCCT-TCTGTTTTG-AA 1084
Query 893 A--CTCGGAGAAGAAGGTAGCCAACTCCATTGAAACATTTCTTGGTCTAGGAT-TCAGCA 949
| ||| |||||||| || || || |||||| ||||| | ||||||| | ||||
Sbjct 1085 AGTCTCCAAGAAGAAGATATTGAAGTCGGCTGAAACGTTTCTAGACCTAGGATAT-AGCA 1143
Query 950 GAGATGACTTTGTAAGGATGGTCAAGCGGTT-TCCTCAGTGCATTGGATTAT-CTGCAGA 1007
||| ||| ||| | | |||||| ||||| || ||||| ||||||| || || ||| |||
Sbjct 1144 GAGCTGAGTTTCTGATGATGGTTAAGCG-TTATCCTCCTTGCATTGAAT-ATTCTGTAGA 1201
Query 1008 GT-TGGTGAAGAAGAAGACTGAGTTTGTGGTGAAAAAGATGAATTGGCCACTAAAGGCTC 1066
|| || | || ||||||| ||||||| ||||||| |||||||| ||||||| ||| || |
Sbjct 1202 GTCTGTTAAA-AAGAAGAATGAGTTTCTGGTGAAGAAGATGAAATGGCCACGAAACGC-C 1259
Query 1067 T-GGTTTCAAACCCTCAGGTACTTGGATTA-AGCATGGAGAAGAGGATTGTCCCAAGGTG 1124
| ||||| |||||||||| |||||| | |||||||||||||||||| | ||||||||
Sbjct 1260 TTGGTTTTGCACCCTCAGGTGTTTGGAT-ACAGCATGGAGAAGAGGATTATACCAAGGTG 1318
Query 1125 TAACGTAATCAAAGCTCTCATCTTAAAAG-ATCTGCTTGGAGACACAAG-AAGCAAACTC 1182
|||| || || |||||||| | | |||| | ||||| ||| | | | ||| ||||
Sbjct 1319 TAACATACTCGAAGCTCTCTTGTCGAAAGGA-CTGCTC--AGA-A-AGGGAAGTGAACTA 1373
Query 1183 CCTCCACT--CCGGTATGTTTTGA--T-TACGGATGA-GAAGTTCTTGGAAATGTATGTC 1236
||| || | || | ||||||| | ||| ||||| | | || || || | ||||||
Sbjct 1374 CCTGCAGTGTCC--TCTGTTTTGTCGTGTACCGATGAAGGATTT-TTAGACAGGTATGTG 1430
Query 1237 AGGAAGCACGATGACAAGCAGCTTGTGGCCGA-GTTGATGGCTATCTTCACTGAAGAGCA 1295
| ||||||| | || | |||| ||| || | |||||||||||| ||||| ||| | |
Sbjct 1431 ATGAAGCAC-A--AC--G-AGCTGGTG-CCTACGTTGATGGCTATATTCACCAAAG-GTA 1482
Query 1296 C-GCTTCATAGATCAGAAGG 1314
| ||||||||||||||||
Sbjct 1483 GTGTTTCATAGATCAGAAGG 1502
> AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=1005
Length=1005
Score = 335 bits (181), Expect = 7e-91
Identities = 374/463 (81%), Gaps = 30/463 (6%)
Strand=Plus/Plus
Query 451 TCTACAGTTCCTAAAATCTTGGGAAAGAGAGGGCACAAAACTATCAGCAGATACTATGAT 510
||| || |||||||| |||||||||| ||||||||||||||| ||||| ||||||||||
Sbjct 440 TCT-CAATTCCTAAACTCTTGGGAAAAAGAGGGCACAAAACTCTCAGCTTATACTATGAT 498
Query 511 TTCGTCAAAGTCA-TTATAGAAGCGGACAAGAGTTCCAAGTACGAGAA-GTTATGTCATT 568
||||| |||| | || ||||||| || |||||||| ||||| || || |||||||| |
Sbjct 499 TTCGTTAAAGAGAGTT-TAGAAGCAGATAAGAGTTCTAAGTATGA-AACTTTATGTCAGT 556
Query 569 CTTTGCCAGAGGGTAGTAAGCAGGAGAACAA-AATCCGAAATTTATTGGTTTTGAGAGAA 627
|||| ||| | || |||| | ||||||||| || ||||| ||| |||||| ||||||
Sbjct 557 CTTTTCCACA-GG--GTAATCTGGAGAACAAGAA-GAGAAATGTATCGGTTTTAAGAGAA 612
Query 628 CTGGGGGTGCCTCAGAGGTTGTTATTCTCCTTGCTCATCTCC---AATCAACATGTCTGC 684
|||| ||||||| | |||||||||| ||||||| || ||| ||||| || |
Sbjct 613 TTGGGAATGCCTCACAAGTTGTTATTCCCCTTGCTTATATCCGTTGGTCAACCTG--T-A 669
Query 685 TGTGGAAAAGAAATTTTTGAAGTA--TCACTC-AGAAAGGTCGTTGATCTGGGTTTTGAT 741
||||||||||| | ||| || || || ||| || ||||| ||||| |||||||||||
Sbjct 670 TGTGGAAAAGATAGATTT-AA-TACGTCTCTCAAG-AAGGTAGTTGAGATGGGTTTTGAT 726
Query 742 CCCACCACCTCAACGTTTGTCGAAGCCCTGTGCAC-TGT-TTACGGAATGAGCGACAAAA 799
|| |||||| ||| ||||||| ||| || | ||| | | ||||| ||||| ||||||||
Sbjct 727 CCGACCACCGCAAAGTTTGTCAAAG--CTCTCCACGTATCTTACGAAATGAACGACAAAA 784
Query 800 CAATAGAAGAAAAAGTCGATGTCTATAAAAGGTTAGGCTTTGCTGTGGAAGATGTATGGG 859
||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||
Sbjct 785 CAATAGAAGAAAAAGTCAATGTCTACAAAATGTTAGGCTTTGCTGTGGAAGATGTATGGG 844
Query 860 CAATGTTCAAGAAGTGGCCACT-CTCTCTTGCAA-ACTCGGAG 900
||| ||||||||||||||| | |||| ||| || |||| |||
Sbjct 845 TAATCTTCAAGAAGTGGCCA-TACTCT-TTGAAATACTCAGAG 885
Score = 226 bits (122), Expect = 5e-58
Identities = 200/236 (85%), Gaps = 12/236 (5%)
Strand=Plus/Plus
Query 103 TCTGCTTTTTCCAA-TCCGTTCTCTTCTGCTGC-A-AG-TGATGCTGATGTGAGCCTTGG 158
|||||||||||||| ||| ||||| ||| ||| | | || ||||||||||||||||
Sbjct 214 TCTGCTTTTTCCAATTCC-TTCTCCACTGTTGCTAGTGCTGCTGCTGATGTGAGCCTTAT 272
Query 159 AGATGGTCGAAAAGGGAAG-ACTTTCACAGTCTCTTACCTCGTTGATTCTTTGGGTTTAT 217
|||| ||| |||||| ||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct 273 AGATAGTCAAAAAGGTAAGAACTTT-ACAGTCTCTTACCTCGTTGATTCATTGGGTTTAC 331
Query 218 CTAAAAAGCTCGCAGAATCTATTTCTAGGAAAGTCAGCTTCTGTTCTGG-CAAGGGTAAT 276
||||||||||||| ||||| ||||| | |||| | || ||| | || ||||| |||
Sbjct 332 CTAAAAAGCTCGCTGAATCGATTTCAAAGAAATTTAGATTC-G---AGGACAAGGCCAAT 387
Query 277 CCTGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACAGATACTCAGATCTC 332
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 388 CCTGATTCTGTTCTGAGTCTTTTGAGAAGTCATGGGTTCACAGTTTCTCAGATCTC 443
> AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970029-22971764 REVERSE
LENGTH=1736
Length=1736
Score = 281 bits (152), Expect = 1e-74
Identities = 348/435 (80%), Gaps = 43/435 (10%)
Strand=Plus/Plus
Query 913 AACTCCATTGAAACATTTCTTGGTC-TAGGATTCAGCAGAGATGACTTTGTAAGGATGGT 971
|||||||| ||||||||| | || | ||||||||||||||||||| ||||| | ||||||
Sbjct 1184 AACTCCATGGAAACATTTATAGG-CTTAGGATTCAGCAGAGATGAGTTTGTCATGATGGT 1242
Query 972 CAAGCGGTTTCCTCAGTGCATTGGATTA-TCTGCAGAGTTGGTGAAGAAGAAGACTGAGT 1030
|||| | ||||||||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct 1243 CAAGTGCCTTCCTCAGTGCATTGGA-TATTCTGCAGAGATGGTGAAGAAGAAGACTGAGT 1301
Query 1031 TTGTGGTGAAAAAGATGAATTGGCCACTAAAGGCTC-TGG-TTTCAAACCCTCAGGTACT 1088
|||||||||| ||||||||||||||||| |||| || | ||| ||||||||||||
Sbjct 1302 TTGTGGTGAAGAAGATGAATTGGCCACTTAAGG-TCATTACTTTGTT-CCCTCAGGTACT 1359
Query 1089 TGGAT-TAAGCATGGAGAAGAGGATTGTCCCAAGGTGTAACGTAATCAAAGCTCTCATCT 1147
||||| || ||||||||||||||| ||||||||||||||| ||||||||||||||||| |
Sbjct 1360 TGGATATA-GCATGGAGAAGAGGACTGTCCCAAGGTGTAATGTAATCAAAGCTCTCATGT 1418
Query 1148 TAAAAG-ATCTGCTTGGAGACACAAGAAGCAAACTCCCTCCACTC-CGGTATGTTTTG-- 1203
|||| || |||||||| | | ||| | |||||||| | || | |||||||
Sbjct 1419 CCAAAGGAT-TGCTTGGA-AG-C--GAA-C----TCCCTCCAATGGCG-TCTGTTTTGGC 1467
Query 1204 AT-TACGGATGAGAAGTTCTTGGAAATGTATGTCAG--GAAGCACGATGACAAGCAGCTT 1260
|| ||| ||| ||| ||||| ||| |||||| | || ||| ||||| || ||||
Sbjct 1468 ATGTACCGATCAGACCTTCTTAAAAAGGTATGTG-GTTGA-GCATGATGA-AA--AGCTG 1522
Query 1261 GTGGCC-GAGTTGATGGCTATCTTCA-CTGAAGAGCACG-CTTCATAG-ATCAGA-AGGT 1315
||| | ||||||||| ||||||||| | |||| | | || ||||| || ||| || |
Sbjct 1523 GTG-CTTGAGTTGATGTCTATCTTCAACC-AAGACCGTGTCT-CATAGCAT-AGAGAGCT 1578
Query 1316 T-TGCCAAGGATTTT 1329
| || ||||||||||
Sbjct 1579 TGTGTCAAGGATTTT 1593
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65511711225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5