BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924840 Length=590 Score E Sequences producing significant alignments: (Bits) Value AT1G61750.1 | Symbols: | Receptor-like protein kinase-related ... 715 0.0 > AT1G61750.1 | Symbols: | Receptor-like protein kinase-related family protein | chr1:22804613-22806318 REVERSE LENGTH=1026 Length=1026 Score = 715 bits (387), Expect = 0.0 Identities = 490/540 (91%), Gaps = 6/540 (1%) Strand=Plus/Plus Query 53 CTATTGCTACACATCAGGAAACTACACGGCAAACAGTTCGTACAAATACAATCTAGATTC 112 ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct 96 CTATTGCTACACATCAGGAAACTACACACCGAACAGTTCGTACAAATCCAATCTAGATAC 155 Query 113 TTTAATATCCGTTCTTGATTCTCAATCATCCAACAAAGGTTTTTACAGCTACGCCTCCAG 172 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct 156 TTTAATATCCGTTCTTGATTCTCAATCATCCAACAAAGGCTTTTATAGCTACGCCTCGGG 215 Query 173 TTCTTCCTCAAGCACAACAGTTTATGGAACTTATCTATGTCGAGGAGACATTTCGTCTTC 232 ||||||| ||| ||||||||| || |||| |||||||||||| ||||| || ||||| || Sbjct 216 TTCTTCCCCAACCACAACAGTGTACGGAAGTTATCTATGTCGCGGAGATATCTCGTCCTC 275 Query 233 AAAATGTGAAACATGCATCTCAAGAGCATCCAAAAACGTTTTTAAATGGTGTGCTGTCCA 292 || |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| Sbjct 276 AACTTGTGAAACATGCATCTCAAGAGCATCCAAAAACGTTTTTATATGGTGTCCGGTCCA 335 Query 293 AAACGAAGCTATCATATGGTATGAAGAATGCTTCCTCAGGTACTCCAACCATCAGATTTT 352 ||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||||| Sbjct 336 AAAAGAAGCTATCATATGGTATGAAGAATGCTTCCTCAGGTACTCCAGCCGTAAGATTTT 395 Query 353 CTCGATTCTTGATCAAGGGCCATTTGTTACATGGACGA-CTTATGATACCATGTTGTACC 411 |||||||||||||||||| ||||||||||||||||| | |||| ||||||| |||||||| Sbjct 396 CTCGATTCTTGATCAAGGTCCATTTGTTACATGGAC-ATCTTACGATACCACGTTGTACC 454 Query 412 AATCTTATTTCATTAATACCGTGGAATATAGTATAGACCGGCTGATACAAGAAGCCTATT 471 | | |||||||||||| |||||||||||| |||| |||||| |||||||||||||||||| Sbjct 455 AGTTTTATTTCATTAACACCGTGGAATATCGTATGGACCGGTTGATACAAGAAGCCTATT 514 Query 472 CGCGTTCTTCATATTTTGCAGAAGAAACTTATCATGTGAGTTGTCTTGGAGAAGTTTACG 531 || | |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| Sbjct 515 CGAGCTCTTCATATTTTGCGGAAGAAACTTATCATGTCAGTTATCTTGGAGAAGTTTACG 574 Query 532 ACCTAA-TAGGATTGGTATACTGTGCACACCCGATCTAAATCAGTATGATTGCTATAGGT 590 | |||| | ||||||||| | ||||||||||||||| |||||||||||||||||||||| Sbjct 575 ATCTAAAT-GGATTGGTACA--GTGCACACCCGATCTGAATCAGTATGATTGCTATAGGT 631 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28382293055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5