BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924844
Length=1069
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61720.1 | Symbols: BAN | NAD(P)-binding Rossmann-fold super... 1683 0.0
> AT1G61720.1 | Symbols: BAN | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:22791168-22792800 REVERSE LENGTH=1224
Length=1224
Score = 1683 bits (911), Expect = 0.0
Identities = 1008/1056 (95%), Gaps = 2/1056 (0%)
Strand=Plus/Plus
Query 13 TACTAATCATGGACCAGACTCTTACACACACCGGAGCGAAGAAGGCTTGTGTTATCGGTG 72
||| ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||
Sbjct 37 TAC-AATCATGGACCAGACTCTTACACACACCGGATCGAAGAAGGCTTGTGTCATTGGTG 95
Query 73 GCACGGGAAACTTAGCCTCTATTCTCATTAAGCATTTGCTTCAAAGTGGCTACAAAGTTA 132
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 96 GCACGGGAAACTTAGCCTCTATTCTCATCAAGCATTTGCTTCAAAGTGGCTACAAAGTTA 155
Query 133 ACACTACAGTTAGAGATCCAGAAAACGAGAAGAAAATAGCTCACCTTAGGCAACTTCAAG 192
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 156 ACACTACAGTTAGAGATCCAGAAAACGAGAAGAAAATAGCTCACCTTAGGAAACTTCAAG 215
Query 193 AACTTGGCGACCTCAAGATCTTTAAGGCGGATTTGACTGATGAAGAGAGTTTTGATTCCT 252
| ||||||||||| |||||||| ||||| ||||||||||||||||| ||||| || ||||
Sbjct 216 AGCTTGGCGACCTGAAGATCTTCAAGGCAGATTTGACTGATGAAGACAGTTTCGAATCCT 275
Query 253 CATTCTCGGGCTGTGAATACATCTTCCATGTAGCAACGCCGATCAACTTTAAATCCGAAG 312
||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 276 CATTCTCCGGCTGTGAATACATCTTCCATGTCGCAACTCCGATCAACTTTAAATCCGAAG 335
Query 313 ATCCCGAGGAAGACATGATCAAGCCGGCGATACAAGGAGTGATCAATGTGTTTAAATCTT 372
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 336 ATCCCGAGAAAGACATGATCAAGCCGGCGATACAAGGAGTGATCAATGTGTTGAAATCTT 395
Query 373 GCTTAAAATCGAAATCAGTCAAGCGTGTGATCTACACATCTTCAGCTGCTGCTGTTTCCA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 396 GCTTAAAATCGAAATCAGTCAAGCGTGTGATCTACACATCTTCAGCTGCTGCTGTTTCCA 455
Query 433 TCAACAATGATTCTGGAACCGGACTCGTGATGAATGAGGAAAACTGGACTGACATTGAAT 492
|||||||| ||||||||||||| |||||||||| || ||||||||||||||| ||||||
Sbjct 456 TCAACAATCTTTCTGGAACCGGAATCGTGATGAACGAAGAAAACTGGACTGACGTTGAAT 515
Query 493 TTCTCAGAGAGAAGAAGCCTTTTAACTGGGGTTACCCAATCTCGAAGATGTTAGCAGAAA 552
|||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 516 TTCTCACAGAGGAGAAGCCTTTTAACTGGGGTTACCCAATCTCGAAGGTGTTAGCAGAAA 575
Query 553 AGACAGCTTGGGAATTTGCGGAAGAGAATAAGATCGATCTCGTTACCGTGATTCCGGCAC 612
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 576 AGACAGCTTGGGAATTTGCAAAAGAGAATAAGATCAATCTCGTTACCGTGATTCCGGCAC 635
Query 613 TTATAGCCGGAAACTCTCTCCTCTCCGATCCTCCGAGCAGTTTATCTCTCTCGATGTCTT 672
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 636 TTATAGCCGGAAACTCTCTCCTCTCCGATCCTCCGAGTAGCTTATCTCTCTCGATGTCTT 695
Query 673 TAATCACCGGGAAAGAAATGCATGTGACCGGTCTTAAGGAAATGCAGAAGCTATCTGGCT 732
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 696 TCATCACCGGGAAAGAAATGCATGTGACCGGTCTCAAGGAAATGCAGAAGCTATCTGGCT 755
Query 733 CGATCTCGTTCGTTCACGTAGACGATTTAGCTCGTGCCCATTTGTTTCTTGCGGAGAAAG 792
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 CGATCTCGTTCGTCCACGTAGACGATTTAGCTCGTGCCCATTTGTTTCTTGCGGAGAAAG 815
Query 793 AAACTGCTTCTGGTCGCTACATATGCTGTGCTTACAACACAAGTGTTCCAGAGATTGCTG 852
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 816 AAACTGCTTCTGGTCGCTACATTTGCTGTGCTTACAACACAAGTGTTCCAGAGATTGCGG 875
Query 853 ATCTTCTCATACAGAGATATCCTAAGTACAATGTGTTGTCAGAATTCCAAGAGGGCTTGT 912
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 876 ATTTTCTCATACAGAGATATCCTAAGTACAATGTGTTGTCAGAATTCGAAGAGGGCTTGT 935
Query 913 CGATTCCGAAATTGATACTATCTTCGGAAAAACTTATCAATGAAGGCTTTCGATTCGAAT 972
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 936 CGATTCCGAAATTGACACTATCTTCGCAAAAACTTATCAATGAAGGCTTTCGATTCGAAT 995
Query 973 ATGGGATCAATGAGATGTATGATCAGATGATAGAGTACTTCGAGTCCAAAGGATTGATCA 1032
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 996 ATGGGATCAATGAGATGTATGATCAAATGATAGAGTACTTCGAGTCAAAAGGATTGATCA 1055
Query 1033 AAGCTAAAGAATCTTGATTTTTATTATGT-AAAATG 1067
|||||||| || ||||| |||||| |||| ||||||
Sbjct 1056 AAGCTAAATAAACTTGACTTTTATAATGTCAAAATG 1091
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52359168435
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5