BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924869 Length=302 Score E Sequences producing significant alignments: (Bits) Value AT1G61570.1 | Symbols: TIM13 | translocase of the inner mitocho... 350 6e-96 > AT1G61570.1 | Symbols: TIM13 | translocase of the inner mitochondrial membrane 13 | chr1:22718705-22719516 REVERSE LENGTH=499 Length=499 Score = 350 bits (189), Expect = 6e-96 Identities = 265/299 (89%), Gaps = 16/299 (5%) Strand=Plus/Plus Query 1 GAC-TTTGAGAGa-a-a-aaaaaaaaTGGATTCATACTCTTCGCCGCCGGTGGGAGG-T- 54 ||| ||||||||| | | | || |||||||||||||||||||||||||| ||||||| | Sbjct 19 GACTTTTGAGAGAGAGAGAGAAGAAATGGATTCATACTCTTCGCCGCCGATGGGAGGTTC 78 Query 55 -GGT-GCTTCGCCTTCGCCCGAAGTACTGATGGAG-CAGGTCAAGACACAACTCGCTCAA 111 ||| | |||| ||||||||||||| |||||||| | ||||||||| || ||||||||| Sbjct 79 AGGTAG-TTCGGTTTCGCCCGAAGTAATGATGGAGTC-GGTCAAGACTCAGCTCGCTCAA 136 Query 112 GCTTACGCCGAAGAGTTCATCGAGACTGTGAG-AGTAAAATGTTTTGATAAGTGCATAAC 170 ||||||||||||||||| ||||||||| |||| | |||||||||||| |||||| |||| Sbjct 137 GCTTACGCCGAAGAGTTAATCGAGACTTTGAGGAC-AAAATGTTTTGACAAGTGCGTAAC 195 Query 171 GAAGCCAGGATCAAGCCTCGGTGGGAGTGAGAGTAGCTGTATTTCGAGATGCT-TTGATC 229 |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| | Sbjct 196 GAAGCCAGGATCAAGCCTCGGTGGAAGTGAGAGTAGCTGTATTTCGAGATG-TGTTGAAC 254 Query 230 GTTACATTGAAGCTACTGGAATCATAAGTCGTTCTCTTTTCACCCAACGTTGAATCAAT 288 ||||||| |||||||||| |||||||||||||||||||||||| ||||||||| ||||| Sbjct 255 GTTACATGGAAGCTACTGCAATCATAAGTCGTTCTCTTTTCACTCAACGTTGA-TCAAT 312 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13974434222 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5