BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg924940
Length=2576
Score E
Sequences producing significant alignments: (Bits) Value
AT1G61030.1 | Symbols: | WAPL (Wings apart-like protein regula... 3858 0.0
AT1G11060.1 | Symbols: | WAPL (Wings apart-like protein regula... 826 0.0
> AT1G61030.1 | Symbols: | WAPL (Wings apart-like protein regulation
of heterochromatin) protein | chr1:22477896-22482380
FORWARD LENGTH=2896
Length=2896
Score = 3858 bits (2089), Expect = 0.0
Identities = 2417/2575 (94%), Gaps = 23/2575 (1%)
Strand=Plus/Plus
Query 13 CTTTCTAGGCGATGATGGAGCGAACTTACGGCCGTCGCAAACCGGGGATGTTAAACGACG 72
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 63 CTTTCTCGGCGATGATGGAGCGAACTTACGGCCGTCGCAAGCCGGGGATGTTAAACGACG 122
Query 73 ACGTTTCGCAGGCGGAGTACCT-TTTTT-CGTCGTCTTCATCTCCAGAACTCGACCCACT 130
|||| |||| |||||| || | ||||| |||| |||||||||||||||||||| ||| |
Sbjct 123 ACGTCTCGCGGGCGGA--ACATATTTTTCCGTCTTCTTCATCTCCAGAACTCGAGCCAGT 180
Query 131 TGATTTCTCAACTCAAGAGTCATCTTGTCTCTGGAATTATTCTTCAAGATCCAATTTTTC 190
|||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||
Sbjct 181 TGATTTCTCAACTCAAGAATCATCTTGTGTCTGGAATTATTCTTCAAGATCCACTTTTTC 240
Query 191 GGAGGATGATTTTTCTCAGAAGAGGGTTAAGAGACCCAGAAACGGTGGTGGAGGGTTTGG 250
||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 241 GGATAATGATTTTTCTGAGAAGAGGAACAAGAGACCCAGAAACGGTGGTGGAGGGTTTGG 300
Query 251 TTTGAATTCGACTTTGATGGAGACGCAAGAATTCGGCGAGTTAATGGAGAATGAGGACGA 310
|| ||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||
Sbjct 301 TTCGAATTCGACTTTGATGGAGGCTCAAGAGTTCGGCGAGTTAATTGAGAATGAGGACGA 360
Query 311 GGTTAACTTCGCTCTTGATGGGTTAAAGAAAGGTCATCAAGTTAGGATCAGAAGAGCTGC 370
||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct 361 AGTTAACTTCGCTCTTGATGGGTTGAAGAAAGGACATAAAGTTAGGATCAGAAGAGCTGC 420
Query 371 TCTGTCTTCTCTACTCTCGATTTGCGAATCTCAATATCAGCGACGCTCTTTGAGAGCTTT 430
| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 421 TTTGTCCTCTCTACTCTCGATTTGTGAATCTCAGTATCAGCGACGCTCTTTGAGAGCTTT 480
Query 431 AGGGATCTCACAATCCATAATCGATGCAATTTTGGGTCTTAGTCTTGATGACATACCAAG 490
|||||||||||| |||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct 481 AGGGATCTCACAGTCCATAATTGATGCGATTTTGGGTCTTTGCCTTGATGACATACCAAG 540
Query 491 CAATCTTGCTGCAGCTACCCTTTTCTTTGTGCTAACTACTGATGGTCAAGATGATCACTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 CAATCTTGCTGCAGCTACCCTTTTCTTTGTGCTAACTACTGATGGTCAAGATGATCACTT 600
Query 551 TATGGAGTCACCCAACTCTATCAAGTTTTTGATCAAGCTGTTGAGACCTGTGGTTTCCGC 610
|||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||
Sbjct 601 TATGGAGTCACCCAACTCCATCAAGTTTTTGGTTAAGCTGTTGAGACCTGTGGTTTCTGC 660
Query 611 CAGTACTAAAGGGAAGCCGCGGCGGAATATAGGATCTAGGCTCTTATCTGTAATCAAGGA 670
||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 661 CAGTACTAAAGTAAAGCCGCGG---AATATAGGATCTAGGCTCTTATCAATAATCAAGGA 717
Query 671 TGTTGATGCAGCACGTGATTCAGGCAGTATGCATGATTCAAGCTCCTGTGATATACTGGA 730
||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| | ||
Sbjct 718 TGTTGATGCAGCACGTGATGCAGCCAGTATGCATGATTTAAGCTCCTGTGATATAATTGA 777
Query 731 CAGAGCCCAGGAGATTCTTGTTAATTGCAAGGAGTTGAGATTGGTTGATGGCTATAAAAT 790
|||||| ||||| |||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 778 CAGAGCTCAGGAAATTCTTGTTAATTGCAAGGAGTTGAGATTGATTGATAGCTATAAAAT 837
Query 791 TGAGAGGATGAGGCCTGAGCTAAGTACGAAATTTGTAGCTTTGTTGGTGATGGAGAAGGC 850
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 838 CGAGAGGATGAGGCCTGAGCTAAGTACGAAATGGGTAGCTTTGTTGGTGATGGAGAAGGC 897
Query 851 GTGCTTGTCCAAAATCTCTTTTGATGATACCTCTGGTACTGTGAAAAAATTTGGAGGAAT 910
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 898 GTGCTTGTCCAAAATCTCTTTTGATGATACCTCTGGTACTGTGAAAAAATCTGGAGGAAT 957
Query 911 GTTCAAGGAGAAACTGCGAGAACTTGGAGGACTTGATGCAGTCTTTGATGTTGTTATGGA 970
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 958 GTTCAAGGAGAAACTGAGAGAACTTGGAGGACTTGATGCTGTCTTTGATGTTGTTATGGA 1017
Query 971 TTGTCACTCTGTAATGGAGAGCTGGGTGGCACTTGACACAATCTCTGCCGAGGATATAAA 1030
||| ||| |||||||||||||||||||| | | ||||||| |||||| ||||||||||||
Sbjct 1018 TTGCCACACTGTAATGGAGAGCTGGGTGACTCATGACACACTCTCTGTCGAGGATATAAA 1077
Query 1031 AGATGATTTGAATAAGCAGAATCTGATTTTGCTTCTGAAATGTCTAAAAATCATGGAGAA 1090
|||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||||
Sbjct 1078 AGATGACTTGAATAAGCAGAGTCTGATGTTACTTCTGAAATGTCTAAAAATCATGGAGAA 1137
Query 1091 TGCTACATTCCTCAGCACAGAAAACCAGATTCATTTGCTCAGATTTAATAAAAGCATGGG 1150
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1138 TGCTACATTCCTCAGCACAGAAAACCAGATTCATTTGCTCAGACTTAATAAAAGCATGGG 1197
Query 1151 TTCTCATGGATCCCGACTATCTTTCCCAGAGCTCATGATAAGCGTCATCAAAATACTTTC 1210
|||||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||
Sbjct 1198 TTCTCATGAATCCCGACTGTCTTTCACAGAGCTCATGATAAGTGTCATCAAAATACTTTC 1257
Query 1211 AGGTCTTCAGTTACGTGCTCACAGGAACGAAAATCATCCTCACCCTCAGCCACATCTATC 1270
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 1258 AGGTCTTCAGTTACGTGCTCACAGGAACGAAAAGCATCCTCACCCTCAGCCACATCTAGC 1317
Query 1271 TTCTGCTGTTAACAAGGACTTTGTGACAATTATTAGTTCAGATACTTGCTCTACCACTAG 1330
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1318 TTCTGCTGTTAAGAAGGGCTTTGTGACAATTATTAGTTCAGATACTTGCTCTACCACTGG 1377
Query 1331 CTGTAGCTCCATAAAAAGTT-GTG--TATCCAAGAGAAATCAGTCTGCATTCCTGTTAGG 1387
|| ||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||
Sbjct 1378 CTTTAGCTCCATAAAAAGTTTGAGCGTATCCAAGAGAAATCAGTCTGCATTCCTGGTAGG 1437
Query 1388 TTGCTCAACGACACCAAAACCAGGGTCTCAATCAAGTGTATTGTCAACAGTTGATCCCTG 1447
|||||||||||||||||| || |||||||||||||||||| |||| ||| |||||| |||
Sbjct 1438 TTGCTCAACGACACCAAAGCCGGGGTCTCAATCAAGTGTAATGTCGACAATTGATCACTG 1497
Query 1448 CACGCCT-ACGACTATAGCTGGTTCCAACACTGGGTCGTTCGCAGGCAGGTTAGCCTCAT 1506
||||| | ||||||| |||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1498 CACGC-TGACGACTACAGCTGGTTCCAACACTGGGTCGTTTGCAGGCAGATTAGCCTCAT 1556
Query 1507 TGGGTAGTGGCATTTCCAGAAGTAATGCAAGGACTAGCCAAACTAGAGAATCCAGTTGTA 1566
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1557 TGGGTAGTGGCATTTCCAGAAGTAAAACAAGGACTAGCCAAACTAGAGAATCCAGTTGTA 1616
Query 1567 AAAAAGTTGAAAACTTTTCATCCTTCGAGGATAGTCAAGATCCTTTTTCATTTGATTTGG 1626
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1617 AAAAAGTTGAAAACTTTGCATCCTTCGAGGATAGTCAAGATCCTTTTTCATTTGATTTAG 1676
Query 1627 AAGATTCAGGACCTTCCAAATGGGCAGTAGTATTAGGAAAGCAAAAGAAATCTAAAGGTC 1686
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct 1677 AAGATTCAGGACCTTCCAGATGGGCAGTAG-----G-AAAGCAAAAGAAATCTAAAGGTC 1730
Query 1687 AAAAGAGGAAGGGAAGCTACAGAGATAAAAAAGATGAACGCTCGCTTCAGCTCTTCTCGA 1746
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1731 AAAAGAGGAAGGGAAGCTACAGAGATAAGAAAGATGAACGCTCGCTTCAGCTCTTCTCGA 1790
Query 1747 GCCAGGAGGAATCAAACCATGGGTTAAATTCCCAGGAAGAATCAAGTGATAGAGATCGCC 1806
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||
Sbjct 1791 GCCAGGAGGAATCAAACCATGGTTTAAATTCTCAGGAGGAATCAAGTGATAGAGATCACC 1850
Query 1807 ATGTAACAGAGCAACCTTCTTCAACATATGACATTGATAAAGGATGTCTCTGTCTTTTAT 1866
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATGTAACAGAGCAACCTTCTTTAACATATGACATTGATAAAGGATGTCTCTGTCTTTTAT 1910
Query 1867 CTGATTGTCTTTTAACAGCCGTGAAGGTATTAATGAACTTAACAAATGATAATTCTGTTG 1926
||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1911 CTGATTGCCTTTTAACAGCCGTGAAGGTATTAATGAACCTAACAAATGGTAATTCTGTTG 1970
Query 1927 GTTGTCGGGAAGTTGCTGCCTGCAGAGGACTGGAGAGCATGGCTGAATTAATTGTTGGAC 1986
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1971 GTTGTCGGGAAGTTGCTGCCTGCGGAGGACTGGAGAGCATGGCTGAATTAGTTGTTGGAC 2030
Query 1987 ACTTTCCTTCCTTCACCAGATCTCCGCTTTTCAGTCTGATGGAGTCCGGGACATGCCACC 2046
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 2031 ACTTTCCTTCCTTCACCAGATCTCCGCTTTACAGTCAGATGGAGTCCGGGACATGCCACC 2090
Query 2047 AGAAAGATAAACATCTCACAGACCAGGAATTAGATTTTCTTGTTGCCATCTTGGGGTTAC 2106
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2091 AGAAAGATAAACATCTCACAGACCAGGAATTAGATTTTCTTGTTGCCATCCTGGGGCTAC 2150
Query 2107 TGGTAAACTTGGTGGAGAAAAACGGAATAAACAGGTCAAGGCTCGCGGCAGCTAGTGTTC 2166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2151 TGGTAAACTTGGTGGAGAAAAACGGAATAAACAGGTCAAGGCTCGCGGCAGCTAGTGTTC 2210
Query 2167 CGATCACTAATCCAGAAGAGTTGCAAGATAGTGAACAAGACATGATTCCTCTTTTATGTT 2226
|||| || |||||||||| ||| ||||||||||||||||||||||| |||||||||||||
Sbjct 2211 CGATTACCAATCCAGAAGGGTTACAAGATAGTGAACAAGACATGATCCCTCTTTTATGTT 2270
Query 2227 CAATCTTTCTCACCAATCAAGGATCCGCAGACGCCAAAGATGATACAAGTACTTTCACTT 2286
||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||
Sbjct 2271 CAATCTTTCTCACCAATAAAGGATCCGCAGACACCAAAGATGAAACGAGTACTTTCACTT 2330
Query 2287 TGGACGATGAAGAAGCTGTTTTAGAAAGCGAAAAGGAAGCGGAAAAGATGATTGTGGAGG 2346
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2331 TGGACGATGAAGAAGCTGTTTTAGAAAGCGAAAAGGAAGCGGAAAAGATGATCGTGGAGG 2390
Query 2347 CATATTCTGCCCTCCTGCTCGCATTTCTATCCACAGAAAGTAGAAGTATACGAAATGCCA 2406
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2391 CATATTCTGCCCTTCTACTTGCATTTCTATCCACAGAAAGTAGAAGTATACGAAATGCCA 2450
Query 2407 TCAGAGATTATCTACCAAAACGCAACATGGCAATTCTGGTACCGGTGTTGGATAGATTTT 2466
||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2451 TCAGAGATTATCTCCCAAAACGCGACATGGCAATTCTGGTACCCGTGTTGGATAGATTTG 2510
Query 2467 TGGCGTTTCATACAACACTGGACATGATTCCTCCGGAAACTCATAAAGCAGTTATGGAAG 2526
|||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct 2511 TGGCGTTTCATACAACACTGGACATGATTCCTCCAGAAACACATAAAGTGGTTATGGAAG 2570
Query 2527 TTATTGAGTTGTGCAAATTGCCATAGAAC--a---aaaaaaaCAGGCGAGATCTT 2576
|||| |||| ||||||||||||||||||| | |||||||||||||| |||||
Sbjct 2571 TTATCGAGTCGTGCAAATTGCCATAGAACGGAGGGAAAAAAACAGGCGACATCTT 2625
> AT1G11060.1 | Symbols: | WAPL (Wings apart-like protein regulation
of heterochromatin) protein | chr1:3684568-3689847 FORWARD
LENGTH=3103
Length=3103
Score = 826 bits (447), Expect = 0.0
Identities = 834/1018 (82%), Gaps = 37/1018 (4%)
Strand=Plus/Plus
Query 227 CAGAAACGGTGGTGGAGGGT-TTGGTTTGAATTCGACTTTGATGGAGACGCAAGAATTCG 285
||| ||||||| | |||| | || ||| | ||| |||||| | ||| | || || || |
Sbjct 420 CAGGAACGGTGCT-GAGGCTGCTGCTTTTACTTCCACTTTGCTTGAGGCTCAGGAGTTTG 478
Query 286 GCGAGTTAATGGAGAATGAGGACGAGGTTAACTTCGCTCTTGATGGGTTAAAGAAAGGTC 345
| ||| | |||||| ||||||| ||||||||||| || ||||||||||| | |||||| |
Sbjct 479 GTGAGCTGATGGAGCATGAGGATGAGGTTAACTTTGCGCTTGATGGGTTGAGGAAAGGAC 538
Query 346 ATCAAG-TTAGGATCAGAAGAGCT-GCTCTGTCTTCTCTACTCTCGATTTGCGAATCTCA 403
| | || | ||||||||||||||| ||| |||| |||||| | |||||||| | ||||||
Sbjct 539 A-CCAGCTCAGGATCAGAAGAGCTAGCT-TGTCCTCTCTATTGTCGATTTGTGCATCTCA 596
Query 404 ATATCAGCGACGCTCTTTGAGAGCTTTAGGGATCTCACAATCCATAATCGATGCAATTTT 463
| | ||||| ||||| ||||| ||| |||||| || ||||||||||| ||||| |||||
Sbjct 597 ACACCAGCGTCGCTCCTTGAGGGCTCAAGGGATTTCCCAATCCATAATTGATGCGATTTT 656
Query 464 GGGTCTTAGTCTTGATGACATACCAAGCAATCTTGCTGCAGCTACCCTTTTCTTTGTGCT 523
|| |||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| |||
Sbjct 657 GGTTCTTAGCCTTGATGATATACCAAGCAATCTTGCCGCAGCCACCCTTTTCTTTGCGCT 716
Query 524 AACTACTGATGGTCAAGATGATCACTTTATGGAGTCACCCAACT-CTATCAAGTTTTTGA 582
|||| ||||||||||||| || |||||||||||||||||||| | | ||||||||| |||
Sbjct 717 AACTGCTGATGGTCAAGACGAGCACTTTATGGAGTCACCCAAGTGC-ATCAAGTTTCTGA 775
Query 583 TCAAGCTGTTGAGACCTGTGGTT-TCCGCCAGTACTAAAGGGAAGCCGCGGCGGAATATA 641
| ||| |||||| ||||||| || | | | || || |||||||||| | || ||||||
Sbjct 776 TAAAGTTGTTGAAACCTGTGATTGT-CACTAGCACCGAAGGGAAGCCAC-GC--AATATA 831
Query 642 GGATCTAGGCTCTTATC-TGTAATCAAGGATGTTGATGCAGCACGTGATTCAG-GCAGTA 699
|||| || ||||||||| | || | |||||||||||||||||||| ||| ||| | | |
Sbjct 832 GGATTTAAGCTCTTATCAT-TACTTAAGGATGTTGATGCAGCACGGGATCCAGTG-AAAA 889
Query 700 TGCATGATTCAAGCTCCTGTGATATACTGGAC-AGAGCCCAGGAGA-TTCTTGTTAATTG 757
|| ||||| | |||||| ||||||| || | |||| ||||| | |||||||||||||
Sbjct 890 TGGATGATCCGAGCTCCAGTGATATCCT-CTCAAGAGTTCAGGA-ACTTCTTGTTAATTG 947
Query 758 CAAGGAGTTGAGATTGGTTGATGGCTATAAAATTGAGAGGATGAGGCCTGAGCTAAGTAC 817
||| || ||||| || |||| |||||| || ||| | | ||||||||||||||||||
Sbjct 948 CAAAGAAATGAGACTGAATGATAGCTATATAACTGAAACAACGAGGCCTGAGCTAAGTAC 1007
Query 818 GAAATTTGTAGCTTTGTTGGTGATGGAGAAG-GCGTGCTTGTCCAAAATCTCTTTTGATG 876
|||| ||||||||||||| |||||| || || ||| | |||||||| ||||||||||
Sbjct 1008 AAAATGGGTAGCTTTGTTGGCCATGGAG-AGAGCATGCGTATCCAAAATTTCTTTTGATG 1066
Query 877 ATACCTCTGGTACTGTGAAA-AA-ATTTGGA-GGAATGTTCAAGGAGAAACTGCGAGAAC 933
|||| |||||| |||| ||| || | |||| ||||| ||||||||||||||||||||||
Sbjct 1067 ATACTTCTGGTTCTGT-AAAGAAGA-CTGGAGGGAAT-TTCAAGGAGAAACTGCGAGAAC 1123
Query 934 TTGGAGGACTTGATGCAGTCTTTGATGTTGTTATGGATTGTCACTCTGTAATGGAGAGCT 993
| |||||||||||||||||| |||| |||||||||||||||||| |||| |||||| | |
Sbjct 1124 TAGGAGGACTTGATGCAGTCCTTGAGGTTGTTATGGATTGTCACGCTGTTATGGAGCGTT 1183
Query 994 GGGTGGCACT-TGACACAATCTCTG-CCGAGGATATA-AAAGATGATTTGAATAAGCAGA 1050
|||||| | | ||| || | || | || |||| | | |||||| || || |||| ||||
Sbjct 1184 GGGTGG-AATACGACGCACTTTCCGTCC-AGGA-AAAGAAAGATAATCTGCATAAACAGA 1240
Query 1051 ATCTGATTTTGCTTCTGAAATGTCTAAAAATCATGGAGAATGCTACATTCCTCAGCACAG 1110
| | || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1241 GTTTAATGTTGCTTCTGAAGTGTCTGAAAATCATGGAGAATGCTACATTCCTCAGCACAG 1300
Query 1111 AAAACCAGATTCATTTGCTCAGATTTAATAAAAGCATGGGTTCTCATGGAT-CCCGACTA 1169
| ||||||| |||||||||| ||||||| ||| | |||||||||||| || ||||| |
Sbjct 1301 ACAACCAGAATCATTTGCTCGGATTTAAGAAATGTTTGGGTTCTCATG-ATTCCCGAATG 1359
Query 1170 TCTTTCCCAGAGCTCATGATAAGCGTCATCAAAATACTTTCAGGTCTTCAGTTACGTG 1227
|||||| ||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct 1360 TCTTTCACAGAGCTCACAATAAGTGTCATCAAGATGCTTTCAGGTCTTCACCTACGTG 1417
Score = 822 bits (445), Expect = 0.0
Identities = 896/1109 (81%), Gaps = 50/1109 (5%)
Strand=Plus/Plus
Query 1477 CTGGGTCGTTCGCAGGCAGGTTAGCCTCATTGGGTAGTGGCATTTCCAGAAGTAATGCAA 1536
|||| || || ||||| || ||||| ||||||||||||| |||| |||||| || | ||
Sbjct 1706 CTGGCTCATTTGCAGGGAGATTAGCGTCATTGGGTAGTGACATTGCCAGAACTACTTTAA 1765
Query 1537 GGACTAGC-CAAACTAGAGAATCCAGT-TGTAAAAAAGTTGAAAACTTTTCATCCTTCGA 1594
|||||| | ||| || ||||| ||| | ||||||||| ||| | | ||| || || |||
Sbjct 1766 GGACTA-CTCAAGCTGGAGAA-CCAATCTGTAAAAAATTTGGAGAGTTTGCACCCCCCGA 1823
Query 1595 GGATAGTC-AAGATCCTTTTTCATTTGATTTGGAAGATTCA-GGACCTTCCAAATGGGCA 1652
||| || | ||||||||||| | |||||||| ||||||| | ||||||||| ||||||
Sbjct 1824 GGAAAG-CGAAGATCCTTTTGCGTTTGATTTAGAAGATT-ATAAACCTTCCAAGTGGGCA 1881
Query 1653 GTAGTATTAGGAAAGCAAAAGAAATCTAAAGGTCAAAAGAGGAAGGGAAGCTACAGAGAT 1712
||||| | | ||| |||||||| |||| || |||||||| ||| ||| |||||| | |
Sbjct 1882 GTAGTGTCCGTAAACCAAAAGAAGTCTAGAGCTCAAAAGAAGAAAGGATGCTACA-A-AC 1939
Query 1713 AAA--AAAGATGAACGCTCGCT-TCAGCTCTTCTCGAGCC-AG--GAGGAATCAAACCAT 1766
||| ||||||||| | | | | |||||| ||||| |||| || ||| ||||||||||
Sbjct 1940 AAAGTAAAGATGAAAGTTTG-TATCAGCTGTTCTCAAGCCAAGAAGAGTCATCAAACCAT 1998
Query 1767 GGGTTAAATTCCCAGGAAGAATCAAGTGATAGAGATC-GCCATGTAACA--G-AGCAACC 1822
|||| |||||||| |||||||||||| | ||||| | | || || ||| | ||||||
Sbjct 1999 AGGTTGAATTCCCAAGAAGAATCAAGTAACAGAGA-CTG-CA-GT-ACATCGCTGCAACC 2054
Query 1823 -T-TC-TTCAACATATGACATTGATAAAGGATGTCTCTGTCTTTTATCTGATTGTCTTTT 1879
| || || ||| ||||||||||| ||| ||||||||||||||||| |||||| ||| |
Sbjct 2055 ATCTCATTGTACAAATGACATTGATGAAGAATGTCTCTGTCTTTTATTTGATTGCCTTCT 2114
Query 1880 AACAGCCGTGAAGGTATTAATGAACTTAACAAATGATAA-TTCTGTTGGTTGTCGGGAAG 1938
|||||||| ||||| || |||||||||||||||||||| | ||| || ||||| |||
Sbjct 2115 GACAGCCGTAAAGGTTTTGATGAACTTAACAAATGATAACGT-TGTCGGATGTCGACAAG 2173
Query 1939 TTGCTGCCTGCAGAGGACTGGAGAGCATGGCTGAATTAATTGTTGGACACTTTCCTTCCT 1998
||| || || ||||| ||||| ||||||||||||||||||| |||||||||| || |
Sbjct 2174 TTGGTGGGTGTAGAGGGCTGGAAAGCATGGCTGAATTAATTGCCAGACACTTTCCGTCTT 2233
Query 1999 TCACCAGATCTCCGCTTTTCAGTCTGATGG---AGTCCGGGA-CATGCCA-C--CAGAAA 2051
|||||||||||| |||||||||| ||||| || ||||| | | ||| | |||||
Sbjct 2234 TCACCAGATCTCAGCTTTTCAGTGAGATGGAAAAG-ACGGGATCGTCCCATCAGAAGAAA 2292
Query 2052 GATAAACATCTCACAGACCAGGAATTAGATTTTCTTGTTGCCATCTTGGGGTTACTGGTA 2111
|| ||| | || || || ||||| |||||||||||||||||||||||||| || ||||||
Sbjct 2293 GACAAATACCTTACCGATCAGGAGTTAGATTTTCTTGTTGCCATCTTGGGTTTGCTGGTA 2352
Query 2112 AACTTGGTGGAGAA-AAACGGAATAAACAGGTCAAGGCTCGCGGCAGCTAGTGTTCCGAT 2170
|| ||||| || || | ||||| | ||||| ||| |||| || |||| |||||||| ||
Sbjct 2353 AATTTGGTTGA-AAGAGACGGAGTGAACAGATCACGGCTTGCTTCAGCGAGTGTTCCTAT 2411
Query 2171 CACTAATCCAGAAGAGTTGCAAGATAGTGAACAAGACATGATTCCTCTT-TTATGTTCAA 2229
|| || ||||||||||||||||| |||||||| || ||||||||| || |||||||||
Sbjct 2412 TACAAAACCAGAAGAGTTGCAAGAAAGTGAACAGGAAATGATTCCT-TTACTATGTTCAA 2470
Query 2230 TCTTTCTCACCAATCAAGGATCCGCAGACG-CCAAAGATGATACAAGTACTTTCACTTTG 2288
|||||||||||||||||||||| ||||| | ||||||| || |||| ||| ||||| ||
Sbjct 2471 TCTTTCTCACCAATCAAGGATCAGCAGA-GACCAAAGAAGAGACAACTACCTTCACCTTA 2529
Query 2289 GACGATGAAGAAGCTGTTTTAGAAAGCGAAAAGGAAGCGGAAAAGATGATTGTGGAGGCA 2348
|| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||
Sbjct 2530 GATGATGAAGAAGCTGTTTTAGAAGGCGAAAAGGAAGCGGAAAAGATGATTGTAGAAGCA 2589
Query 2349 TATTCTGCCCTCCTGCTCGCATTTCTATCCACAGAAAGTAGAAGTATACGAAA-TGCCAT 2407
|| ||||| || || ||||| ||||| || || ||||||||||||||||| || | ||||
Sbjct 2590 TACTCTGCTCTACTACTCGCCTTTCTTTCAACTGAAAGTAGAAGTATACGCAACT-CCAT 2648
Query 2408 CAGAG-ATTATCTACCAAAACGCAA-CATGGCAATTCTGGTACCGGTGTTGGATAGATTT 2465
|| || | ||||| || |||||||| | |||||||||| |||||||| ||||| ||||||
Sbjct 2649 CA-AGGACTATCTCCCGAAACGCAATC-TGGCAATTCTTGTACCGGTTTTGGAAAGATTT 2706
Query 2466 TTGGCGTTTCATACAACACTGGACATGATTCCTCCGGAAACTCATAAAGCAGTTATGGAA 2525
|||| ||||| | || ||| ||||||| |||||||| || ||||||||||| |||| |
Sbjct 2707 GTGGCATTTCACATGACTCTGAACATGATCCCTCCGGAGACACATAAAGCAGTGATGGGA 2766
Query 2526 GTTATTGAGTTGTGCAAATTGCCATAGAA 2554
|| ||||| | ||||||| || |||||
Sbjct 2767 GTGATTGAATCCTGCAAATCACCGTAGAA 2795
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127875537707
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5