BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924945 Length=408 Score E Sequences producing significant alignments: (Bits) Value AT1G60986.1 | Symbols: SCRL4 | SCR-like 4 | chr1:22459000-22459... 571 2e-162 AT2G25687.1 | Symbols: | Encodes a defensin-like (DEFL) family... 375 1e-103 AT1G60989.1 | Symbols: SCRL7 | SCR-like 7 | chr1:22462160-22462... 222 2e-57 > AT1G60986.1 | Symbols: SCRL4 | SCR-like 4 | chr1:22459000-22459650 FORWARD LENGTH=548 Length=548 Score = 571 bits (309), Expect = 2e-162 Identities = 382/416 (92%), Gaps = 9/416 (2%) Strand=Plus/Plus Query 1 GAAGAAACTTGCAAGAAAATATGAAATTTGCTGCAATCTTCTTAGTTAATTGTGTCTTAT 60 ||| |||||| |||||||||||||| |||||||||||||| || |||| ||||||||||| Sbjct 53 GAAAAAACTTACAAGAAAATATGAAGTTTGCTGCAATCTTGTTGGTTACTTGTGTCTTAT 112 Query 61 TCTCCCTTCTCTCAAGCCACCTTTCACAAGGTGAAGAATCAAGCATAAATATTGATGCGC 120 ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 113 TCTCCCTTCTCCCAAGCCATCTTTCACAAGGTGAAGAATCAAGCATGAATATTGATGCGC 172 Query 121 AGAGAAGGCCATGGTGTCCGTCTAAAAAACAGGTGTTCAGTGGTTCGTGTGGAAATGATG 180 ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 173 AGAGAAGGCCATGGTGTCCGTCTAAAAAACAAGTGTTCGGTGGTTCGTGTGGAAATGATG 232 Query 181 GAGCACAACAATGTCTAAATAACTTATTATGGACATGGAATCCAAGTGTAAGGCTCAGCC 240 ||||||||||||||||||||||||||||| | |||||| |||||||||||||||| |||| Sbjct 233 GAGCACAACAATGTCTAAATAACTTATTAAGTACATGGGATCCAAGTGTAAGGCTTAGCC 292 Query 241 CTA-TCTACTGCAATTGCACTCCTCAACCTAACAATAATATTCTTTGTAGTTGTCCTAAC 299 | | ||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 293 C-AGTCTCCTGCAATTGCACTCCTCAACCTAACAACAATATTCTTTGCAGTTGTCCTAAC 351 Query 300 ATGATTTGCCCATAGAAAACGTCTATTTAAGACCCAAACTGATGTTCTAAATCCTTTTTC 359 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 352 ATGATTTGCCCATAGAAAACGTCTATTTAAGACCCAAACTGTTGTTCTAAATCATTTTTA 411 Query 360 TCTGTATCAAGAATAAC-------GTTTCAGTTTCTAATGAAAACCCCGAAGACTT 408 |||||||||| ||||| |||||||||||| |||||||||||||||||| Sbjct 412 TCTGTATCAATAATAATAATATATGTTTCAGTTTCTCGTGAAAACCCCGAAGACTT 467 > AT2G25687.1 | Symbols: | Encodes a defensin-like (DEFL) family protein. | chr2:10939037-10939418 FORWARD LENGTH=281 Length=281 Score = 375 bits (203), Expect = 1e-103 Identities = 253/277 (91%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 20 TATGAAATTTGCTGCAATCTTCTTAGTTAATTGTGTCTTATTCTCCCTTCTCTCAAGCCA 79 |||| | ||||||||||| ||||| |||| |||||||||||||||||||||| ||||||| Sbjct 1 TATG-AGTTTGCTGCAATATTCTTGGTTACTTGTGTCTTATTCTCCCTTCTCCCAAGCCA 59 Query 80 CCTTTCACAAGGTGAAGAATCAAGCATAAATATTGATGCGCAGAGAAGGCCATGGTGTCC 139 ||||||||||||||||||||||||||| || |||| ||| |||||||||||||||||||| Sbjct 60 CCTTTCACAAGGTGAAGAATCAAGCATGAACATTGCTGCACAGAGAAGGCCATGGTGTCC 119 Query 140 GTCTAAAAAACAGGTGTTCAGTGGTTCGTGTGGAAATGATGGAGCACAACAATGTCTAAA 199 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 120 ATCTAAAAAACAAGTGTTCAGTGGTTCGTGTGG-AATGATGGAGCACAACAATGTCTAAA 178 Query 200 TAACTTATT-ATGGACATGGAATCCAAGTGTAAGGCTCAGCCCTATCTACTGCAATTGCA 258 ||||||||| | | |||||| |||||||||||||||| ||||| |||| ||||||||||| Sbjct 179 TAACTTATTCA-GTACATGGGATCCAAGTGTAAGGCTGAGCCCAATCTCCTGCAATTGCA 237 Query 259 CTCCTCAACCTAACAATAATATTCTTTGTAGTTGTCC 295 ||||||||| |||| | ||||||||||||||||||| Sbjct 238 CTCCTCAACTTAACTACCATATTCTTTGTAGTTGTCC 274 > AT1G60989.1 | Symbols: SCRL7 | SCR-like 7 | chr1:22462160-22462721 FORWARD LENGTH=477 Length=477 Score = 222 bits (120), Expect = 2e-57 Identities = 313/399 (78%), Gaps = 42/399 (11%) Strand=Plus/Plus Query 1 GAAGAAACTTGCAAG-AA-A-ATATGAAATTTGCTGCAATCTTCTTAG-TTAATTGTGTC 56 ||| |||||| | || || | ||||||| || |||||||||||||| | || | |||| Sbjct 50 GAA-AAACTTAC-AGAAACACATATGAAGTTGGCTGCAATCTTCTTGGCTT-CCTCTGTC 106 Query 57 TTATTCTCCCTTC-TCTCAAGCCACCTTTCACAAGGTGAAGAATCAAGCATAAATATTGA 115 ||| ||||||||| || ||| ||||||||| |||||||||| | || || Sbjct 107 TTACTCTCCCTTCTTC-CAATCCACCTTTCGCAAGGTGAAG---C-TGC--------TG- 152 Query 116 TGCGCAGAGAAGGCCA-TGGTGTCCGTCTAAAA-AACAGGTGTTCAGTGGTTCGTG-TGG 172 | | |||||||| || ||||| || || |||| |||| |||||||| ||||| || | Sbjct 153 -G-GGAGAGAAGG-CAGTGGTGCCCATC-AAAACAACAAGTGTTCAGAGGTTCATGCT-C 207 Query 173 AAATGATGGAGCACAACAATGTCTAAATAACTTATTATGGACATGGAATCCAAGTGTAAG 232 | | ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 208 AGACGATGGAGGACAAAAATGTCTAAATGACTTATTATGGACATGGAATCCAAGTGTAAG 267 Query 233 GCTCAGCCCTATCTACTGCAATTGCACTCCTCAACCTAACAATAATATTCTTTGT-AGTT 291 ||| |||||||||||||| ||||||||||| ||| | |||| || ||| || | || Sbjct 268 GCTTAGCCCTATCTACTGTGATTGCACTCCTAAACGTCACAACAAGCGTCTCTGCGA-TT 326 Query 292 GTCCTAACATGATTTGCC-CATAGAAA-ACGTCTATTTAAGA-CCCAAACTGATGTTCTA 348 |||||| |||||||||| | || ||| |||||||||||||| ||||||||| ||||||| Sbjct 327 GTCCTAGTATGATTTGCCTC-TA-AAACACGTCTATTTAAGATCCCAAACTGTTGTTCTA 384 Query 349 AATCCTTTTTCTCTGTATCAAGAATAACGTTTCAGTTTC 387 || || || ||||||| ||||| |||||| |||| Sbjct 385 --TC-TTC--CTATGTATCATTAATAATGTTTCAATTTC 418 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19302815616 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5